RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 ABCC5O15440 1437 aa15.53■□□□□ 0.08
SENP3-EIF4A1-201ENST00000614237 KDM6BO15054 1643 aa15.53■□□□□ 0.08
SENP3-EIF4A1-201ENST00000614237 GPATCH8Q9UKJ3 1502 aaKnown RBP15.51■□□□□ 0.07
SENP3-EIF4A1-201ENST00000614237 ABCC10Q5T3U5 1492 aa15.51■□□□□ 0.07
SENP3-EIF4A1-201ENST00000614237 SHANK2Q9UPX8 1470 aa15.51■□□□□ 0.07
SENP3-EIF4A1-201ENST00000614237 CHMP7Q8WUX9 453 aaPredicted RBP15.51■□□□□ 0.07
SENP3-EIF4A1-201ENST00000614237 CDC42BPAQ5VT25 1732 aa15.5■□□□□ 0.07
SENP3-EIF4A1-201ENST00000614237 PLB1Q6P1J6 1458 aa15.5■□□□□ 0.07
SENP3-EIF4A1-201ENST00000614237 KIF14Q15058 1648 aa15.49■□□□□ 0.07
SENP3-EIF4A1-201ENST00000614237 JPH4Q96JJ6 628 aa15.48■□□□□ 0.07
SENP3-EIF4A1-201ENST00000614237 CAMSAP2Q08AD1 1489 aa15.48■□□□□ 0.07
SENP3-EIF4A1-201ENST00000614237 SIN3AQ96ST3 1273 aa15.48■□□□□ 0.07
SENP3-EIF4A1-201ENST00000614237 ARHGEF5Q12774 1597 aa15.47■□□□□ 0.07
SENP3-EIF4A1-201ENST00000614237 KCNH8Q96L42 1107 aa15.47■□□□□ 0.07
SENP3-EIF4A1-201ENST00000614237 TSHZ2Q9NRE2 1034 aa15.47■□□□□ 0.07
SENP3-EIF4A1-201ENST00000614237 CHD1O14646 1710 aa15.46■□□□□ 0.07
SENP3-EIF4A1-201ENST00000614237 ATP10BO94823 1461 aa15.45■□□□□ 0.06
SENP3-EIF4A1-201ENST00000614237 PRG4Q92954 1404 aaPredicted RBP15.45■□□□□ 0.06
SENP3-EIF4A1-201ENST00000614237 ANP32EQ9BTT0 268 aa15.44■□□□□ 0.06
SENP3-EIF4A1-201ENST00000614237 KDM5DQ9BY66 1539 aa15.44■□□□□ 0.06
SENP3-EIF4A1-201ENST00000614237 TONSLQ96HA7 1378 aa15.43■□□□□ 0.06
SENP3-EIF4A1-201ENST00000614237 NCOA1Q15788 1441 aa15.42■□□□□ 0.06
SENP3-EIF4A1-201ENST00000614237 FKBP8Q14318 412 aa15.42■□□□□ 0.06
SENP3-EIF4A1-201ENST00000614237 RPRD2Q5VT52 1461 aaKnown RBP15.41■□□□□ 0.06
SENP3-EIF4A1-201ENST00000614237 PREX2Q70Z35 1606 aa15.4■□□□□ 0.06
SENP3-EIF4A1-201ENST00000614237 ANKRD30BQ9BXX2 1392 aa15.4■□□□□ 0.06
SENP3-EIF4A1-201ENST00000614237 MAST1Q9Y2H9 1570 aa15.39■□□□□ 0.05
SENP3-EIF4A1-201ENST00000614237 POLR1AO95602 1720 aaPredicted RBP15.38■□□□□ 0.05
SENP3-EIF4A1-201ENST00000614237 PZPP20742 1482 aa15.38■□□□□ 0.05
SENP3-EIF4A1-201ENST00000614237 HIRIP3Q9BW71 556 aaPredicted RBP15.38■□□□□ 0.05
SENP3-EIF4A1-201ENST00000614237 MPHOSPH9Q99550 1183 aa15.37■□□□□ 0.05
SENP3-EIF4A1-201ENST00000614237 TEX14Q8IWB6 1497 aa15.37■□□□□ 0.05
SENP3-EIF4A1-201ENST00000614237 CLASP1Q7Z460 1538 aa15.37■□□□□ 0.05
SENP3-EIF4A1-201ENST00000614237 CDC42BPBQ9Y5S2 1711 aa15.35■□□□□ 0.05
SENP3-EIF4A1-201ENST00000614237 UHRF1BP1LA0JNW5 1464 aa15.35■□□□□ 0.05
SENP3-EIF4A1-201ENST00000614237 RRP7BPQ9NSQ0 103 aa15.34■□□□□ 0.05
SENP3-EIF4A1-201ENST00000614237 MBD5Q9P267 1494 aa15.33■□□□□ 0.05
SENP3-EIF4A1-201ENST00000614237 PTPRGP23470 1445 aa15.33■□□□□ 0.04
SENP3-EIF4A1-201ENST00000614237 ABCC2Q92887 1545 aa15.33■□□□□ 0.04
SENP3-EIF4A1-201ENST00000614237 CCER2I3L3R5 266 aa15.33■□□□□ 0.04
SENP3-EIF4A1-201ENST00000614237 ANKRD30AQ9BXX3 1397 aa15.32■□□□□ 0.04
SENP3-EIF4A1-201ENST00000614237 TRIM52Q96A61 297 aa15.32■□□□□ 0.04
SENP3-EIF4A1-201ENST00000614237 CFDP1Q9UEE9 299 aaPredicted RBP15.32■□□□□ 0.04
SENP3-EIF4A1-201ENST00000614237 PLEKHD1A6NEE1 506 aa15.31■□□□□ 0.04
SENP3-EIF4A1-201ENST00000614237 SAMD9LQ8IVG5 1584 aa15.31■□□□□ 0.04
SENP3-EIF4A1-201ENST00000614237 RSPH4AQ5TD94 716 aa15.3■□□□□ 0.04
SENP3-EIF4A1-201ENST00000614237 ZNF644Q9H582 1327 aaPredicted RBP15.3■□□□□ 0.04
SENP3-EIF4A1-201ENST00000614237 IRX6P78412 446 aaPredicted RBP15.3■□□□□ 0.04
SENP3-EIF4A1-201ENST00000614237 KIAA1107Q9UPP5 1409 aa15.29■□□□□ 0.04
SENP3-EIF4A1-201ENST00000614237 PLXNC1O60486 1568 aa15.28■□□□□ 0.04
SENP3-EIF4A1-201ENST00000614237 CHIC2Q9UKJ5 165 aa15.28■□□□□ 0.04
SENP3-EIF4A1-201ENST00000614237 ERICH6Q7L0X2 663 aa15.28■□□□□ 0.04
SENP3-EIF4A1-201ENST00000614237 C9orf84Q5VXU9 1444 aa15.27■□□□□ 0.04
SENP3-EIF4A1-201ENST00000614237 ARAP3Q8WWN8 1544 aa15.27■□□□□ 0.03
SENP3-EIF4A1-201ENST00000614237 ARHGEF12Q9NZN5 1544 aa15.27■□□□□ 0.03
SENP3-EIF4A1-201ENST00000614237 NEFLP07196 543 aa15.26■□□□□ 0.03
SENP3-EIF4A1-201ENST00000614237 MYO5CQ9NQX4 1742 aa15.26■□□□□ 0.03
SENP3-EIF4A1-201ENST00000614237 SPATA31E1Q6ZUB1 1445 aa15.26■□□□□ 0.03
SENP3-EIF4A1-201ENST00000614237 UNC13BO14795 1591 aa15.26■□□□□ 0.03
SENP3-EIF4A1-201ENST00000614237 PLEKHH2Q8IVE3 1493 aa15.26■□□□□ 0.03
SENP3-EIF4A1-201ENST00000614237 ANKRD50Q9ULJ7 1429 aa15.26■□□□□ 0.03
SENP3-EIF4A1-201ENST00000614237 CCDC141Q6ZP82 1450 aa15.25■□□□□ 0.03
SENP3-EIF4A1-201ENST00000614237 DDX10Q13206 875 aaKnown RBP15.25■□□□□ 0.03
SENP3-EIF4A1-201ENST00000614237 UHRF1BP1Q6BDS2 1440 aa15.25■□□□□ 0.03
SENP3-EIF4A1-201ENST00000614237 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.25■□□□□ 0.032e-6■■■□□ 15.2
SENP3-EIF4A1-201ENST00000614237 FBLN2P98095 1184 aa15.24■□□□□ 0.03
SENP3-EIF4A1-201ENST00000614237 TTC37Q6PGP7 1564 aa15.22■□□□□ 0.03
SENP3-EIF4A1-201ENST00000614237 CNGB1Q14028 1251 aaPredicted RBP15.22■□□□□ 0.03
SENP3-EIF4A1-201ENST00000614237 ZCCHC11Q5TAX3 1644 aaKnown RBP15.21■□□□□ 0.02
SENP3-EIF4A1-201ENST00000614237 MAGI2Q86UL8 1455 aa15.2■□□□□ 0.02
SENP3-EIF4A1-201ENST00000614237 L3MBTL2Q969R5 705 aa15.2■□□□□ 0.02
SENP3-EIF4A1-201ENST00000614237 IQGAP3Q86VI3 1631 aa15.18■□□□□ 0.02
SENP3-EIF4A1-201ENST00000614237 ERCC6L2Q5T890 1561 aa15.18■□□□□ 0.02
SENP3-EIF4A1-201ENST00000614237 ARID3CA6NKF2 412 aa15.18■□□□□ 0.02
SENP3-EIF4A1-201ENST00000614237 SLC4A1APQ9BWU0 796 aaKnown RBP15.17■□□□□ 0.02
SENP3-EIF4A1-201ENST00000614237 RBM19Q9Y4C8 960 aaKnown RBP15.17■□□□□ 0.02
SENP3-EIF4A1-201ENST00000614237 EIF4G2P78344 907 aaKnown RBP eCLIP15.16■□□□□ 0.026e-7■□□□□ 9.9
SENP3-EIF4A1-201ENST00000614237 ATP10AO60312 1499 aa15.16■□□□□ 0.02
SENP3-EIF4A1-201ENST00000614237 ARID4BQ4LE39 1312 aaPredicted RBP15.15■□□□□ 0.02
SENP3-EIF4A1-201ENST00000614237 KDM5CP41229 1560 aa15.15■□□□□ 0.02
SENP3-EIF4A1-201ENST00000614237 CNTLNQ9NXG0 1405 aa15.15■□□□□ 0.02
SENP3-EIF4A1-201ENST00000614237 PLCH2O75038 1416 aa15.15■□□□□ 0.02
SENP3-EIF4A1-201ENST00000614237 RALGAPBQ86X10 1494 aa15.15■□□□□ 0.02
SENP3-EIF4A1-201ENST00000614237 ANP32CO43423 234 aa15.14■□□□□ 0.01
SENP3-EIF4A1-201ENST00000614237 HSPA5P11021 654 aaKnown RBP15.14■□□□□ 0.01
SENP3-EIF4A1-201ENST00000614237 LAMC1P11047 1609 aa15.14■□□□□ 0.01
SENP3-EIF4A1-201ENST00000614237 DUOX2Q9NRD8 1548 aa15.14■□□□□ 0.01
SENP3-EIF4A1-201ENST00000614237 WASHC2AQ641Q2 1341 aa15.14■□□□□ 0.01
SENP3-EIF4A1-201ENST00000614237 KIF15Q9NS87 1388 aa15.14■□□□□ 0.01
SENP3-EIF4A1-201ENST00000614237 FAM135AQ9P2D6 1515 aa15.14■□□□□ 0.01
SENP3-EIF4A1-201ENST00000614237 SYCP2Q9BX26 1530 aa15.13■□□□□ 0.01
SENP3-EIF4A1-201ENST00000614237 ABCC1P33527 1531 aa15.13■□□□□ 0.01
SENP3-EIF4A1-201ENST00000614237 ERBINQ96RT1 1412 aa15.13■□□□□ 0.01
SENP3-EIF4A1-201ENST00000614237 TSPY4P0CV99 314 aa15.12■□□□□ 0.01
SENP3-EIF4A1-201ENST00000614237 TSPY10P0CW01 314 aa15.12■□□□□ 0.01
SENP3-EIF4A1-201ENST00000614237 ARHGAP5Q13017 1502 aa15.11■□□□□ 0.01
SENP3-EIF4A1-201ENST00000614237 CCDC7Q96M83 1385 aa15.11■□□□□ 0.01
SENP3-EIF4A1-201ENST00000614237 NBPF8Q3BBV2 869 aa15.1■□□□□ 0.01
SENP3-EIF4A1-201ENST00000614237 RTEL1-TNFRSF6BF6WH68 1400 aa15.1■□□□□ 0.01
SENP3-EIF4A1-201ENST00000614237 SENP3-EIF4A1A0A087X0R7 540 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms