RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 MAGI2Q86UL8 1455 aa36.78■■■■□ 3.48
FAM228B-208ENST00000613899 ARHGAP5Q13017 1502 aa36.78■■■■□ 3.48
FAM228B-208ENST00000613899 ADAMTSL3P82987 1691 aa36.77■■■■□ 3.48
FAM228B-208ENST00000613899 ZFYVE16Q7Z3T8 1539 aa36.77■■■■□ 3.48
FAM228B-208ENST00000613899 BCORL1Q5H9F3 1711 aa36.76■■■■□ 3.48
FAM228B-208ENST00000613899 PREX2Q70Z35 1606 aa36.71■■■■□ 3.47
FAM228B-208ENST00000613899 ARID4BQ4LE39 1312 aaPredicted RBP36.71■■■■□ 3.47
FAM228B-208ENST00000613899 CDC42BPBQ9Y5S2 1711 aa36.71■■■■□ 3.47
FAM228B-208ENST00000613899 YEATS2Q9ULM3 1422 aa36.68■■■■□ 3.46
FAM228B-208ENST00000613899 ZNF518AQ6AHZ1 1483 aa36.65■■■■□ 3.46
FAM228B-208ENST00000613899 HECW2Q9P2P5 1572 aa36.65■■■■□ 3.46
FAM228B-208ENST00000613899 MADDQ8WXG6 1647 aa36.63■■■■□ 3.45
FAM228B-208ENST00000613899 CEP162Q5TB80 1403 aa36.63■■■■□ 3.45
FAM228B-208ENST00000613899 PTPRMP28827 1452 aa36.62■■■■□ 3.45
FAM228B-208ENST00000613899 CDC42BPAQ5VT25 1732 aa36.61■■■■□ 3.45
FAM228B-208ENST00000613899 KDM5CP41229 1560 aa36.6■■■■□ 3.45
FAM228B-208ENST00000613899 SIGLEC1Q9BZZ2 1709 aa36.57■■■■□ 3.45
FAM228B-208ENST00000613899 ABCC1P33527 1531 aa36.56■■■■□ 3.44
FAM228B-208ENST00000613899 ATP10AO60312 1499 aa36.53■■■■□ 3.44
FAM228B-208ENST00000613899 C9orf84Q5VXU9 1444 aa36.52■■■■□ 3.44
FAM228B-208ENST00000613899 RIMS1Q86UR5 1692 aaKnown RBP36.52■■■■□ 3.44
FAM228B-208ENST00000613899 ITSN2Q9NZM3 1697 aa36.52■■■■□ 3.44
FAM228B-208ENST00000613899 AFAP1Q8N556 730 aa36.47■■■■□ 3.43
FAM228B-208ENST00000613899 MTUS2Q5JR59 1369 aa36.47■■■■□ 3.43
FAM228B-208ENST00000613899 ARHGEF12Q9NZN5 1544 aa36.44■■■■□ 3.42
FAM228B-208ENST00000613899 GPATCH8Q9UKJ3 1502 aaKnown RBP36.44■■■■□ 3.42
FAM228B-208ENST00000613899 MLH3Q9UHC1 1453 aa36.43■■■■□ 3.42
FAM228B-208ENST00000613899 EHBP1L1Q8N3D4 1523 aa36.43■■■■□ 3.42
FAM228B-208ENST00000613899 DIP2CQ9Y2E4 1556 aa36.42■■■■□ 3.42
FAM228B-208ENST00000613899 FER1L4A9Z1Z3 1794 aa36.42■■■■□ 3.42
FAM228B-208ENST00000613899 TRAPPC8Q9Y2L5 1435 aa36.42■■■■□ 3.42
FAM228B-208ENST00000613899 SAMD9LQ8IVG5 1584 aa36.41■■■■□ 3.42
FAM228B-208ENST00000613899 MYT1LQ9UL68 1186 aa36.4■■■■□ 3.42
FAM228B-208ENST00000613899 REREQ9P2R6 1566 aa36.39■■■■□ 3.42
FAM228B-208ENST00000613899 ABCA6Q8N139 1617 aa36.38■■■■□ 3.41
FAM228B-208ENST00000613899 CCNB3Q8WWL7 1395 aa36.38■■■■□ 3.41
FAM228B-208ENST00000613899 SYCP2Q9BX26 1530 aa36.35■■■■□ 3.41
FAM228B-208ENST00000613899 MLECQ14165 292 aa36.35■■■■□ 3.41
FAM228B-208ENST00000613899 ZNF777Q9ULD5 760 aaPredicted RBP36.34■■■■□ 3.41
FAM228B-208ENST00000613899 PLEKHH2Q8IVE3 1493 aa36.32■■■■□ 3.41
FAM228B-208ENST00000613899 KIDINS220Q9ULH0 1771 aa36.31■■■■□ 3.4
FAM228B-208ENST00000613899 CFDP1Q9UEE9 299 aaPredicted RBP36.3■■■■□ 3.4
FAM228B-208ENST00000613899 TIAM1Q13009 1591 aa36.3■■■■□ 3.4
FAM228B-208ENST00000613899 LOC105371045A0A1W2PR82 267 aa36.29■■■■□ 3.4
FAM228B-208ENST00000613899 KIAA1107Q9UPP5 1409 aa36.28■■■■□ 3.4
FAM228B-208ENST00000613899 VPS8Q8N3P4 1428 aa36.25■■■■□ 3.39
FAM228B-208ENST00000613899 AGLP35573 1532 aa36.24■■■■□ 3.39
FAM228B-208ENST00000613899 LMTK3Q96Q04 1460 aa36.24■■■■□ 3.39
FAM228B-208ENST00000613899 SUPT6HQ7KZ85 1726 aaKnown RBP36.22■■■■□ 3.39
FAM228B-208ENST00000613899 HNRNPMP52272 730 aaKnown RBP eCLIP36.18■■■■□ 3.38
FAM228B-208ENST00000613899 SPAG9O60271 1321 aaKnown RBP36.17■■■■□ 3.38
FAM228B-208ENST00000613899 PLPPR3Q6T4P5 718 aa36.17■■■■□ 3.38
FAM228B-208ENST00000613899 INO80Q9ULG1 1556 aaPredicted RBP36.17■■■■□ 3.38
FAM228B-208ENST00000613899 ATP7AQ04656 1500 aa36.17■■■■□ 3.38
FAM228B-208ENST00000613899 NCOA2Q15596 1464 aa36.14■■■■□ 3.38
FAM228B-208ENST00000613899 PREX1Q8TCU6 1659 aa36.06■■■■□ 3.36
FAM228B-208ENST00000613899 LRRC9Q6ZRR7 1453 aa36.05■■■■□ 3.36
FAM228B-208ENST00000613899 MAP3K1Q13233 1512 aa36.05■■■■□ 3.36
FAM228B-208ENST00000613899 ZNF644Q9H582 1327 aaPredicted RBP36.05■■■■□ 3.36
FAM228B-208ENST00000613899 MBD5Q9P267 1494 aa36.05■■■■□ 3.36
FAM228B-208ENST00000613899 PLXNC1O60486 1568 aa36.04■■■■□ 3.36
FAM228B-208ENST00000613899 ESF1Q9H501 851 aaKnown RBP36.02■■■■□ 3.36
FAM228B-208ENST00000613899 ADGBQ8N7X0 1667 aa36.01■■■■□ 3.36
FAM228B-208ENST00000613899 C3P01024 1663 aa36■■■■□ 3.35
FAM228B-208ENST00000613899 A2MP01023 1474 aa36■■■■□ 3.35
FAM228B-208ENST00000613899 CAMSAP2Q08AD1 1489 aa36■■■■□ 3.35
FAM228B-208ENST00000613899 CNTLNQ9NXG0 1405 aa36■■■■□ 3.35
FAM228B-208ENST00000613899 CEBPAP49715 358 aaPredicted RBP35.99■■■■□ 3.35
FAM228B-208ENST00000613899 RTEL1-TNFRSF6BF6WH68 1400 aa35.96■■■■□ 3.35
FAM228B-208ENST00000613899 CCDC141Q6ZP82 1450 aa35.96■■■■□ 3.35
FAM228B-208ENST00000613899 HSPA2P54652 639 aa35.95■■■■□ 3.35
FAM228B-208ENST00000613899 SETD1BQ9UPS6 1966 aaKnown RBP35.95■■■■□ 3.34
FAM228B-208ENST00000613899 MROH2AA6NES4 1674 aa35.93■■■■□ 3.34
FAM228B-208ENST00000613899 UHRF1BP1Q6BDS2 1440 aa35.9■■■■□ 3.34
FAM228B-208ENST00000613899 ARHGEF5Q12774 1597 aa35.89■■■■□ 3.34
FAM228B-208ENST00000613899 RSPH4AQ5TD94 716 aa35.88■■■■□ 3.33
FAM228B-208ENST00000613899 KANK4Q5T7N3 995 aaPredicted RBP35.84■■■■□ 3.33
FAM228B-208ENST00000613899 ILDR1Q86SU0 546 aaPredicted RBP35.83■■■■□ 3.33
FAM228B-208ENST00000613899 CLTCQ00610 1675 aaKnown RBP35.82■■■■□ 3.33
FAM228B-208ENST00000613899 MYOM3Q5VTT5 1437 aa35.8■■■■□ 3.32
FAM228B-208ENST00000613899 DHX29Q7Z478 1369 aaKnown RBP35.78■■■■□ 3.32
FAM228B-208ENST00000613899 MIA2Q96PC5 1412 aa35.78■■■■□ 3.32
FAM228B-208ENST00000613899 APLP2Q06481 763 aa35.78■■■■□ 3.32
FAM228B-208ENST00000613899 NPATQ14207 1427 aa35.77■■■■□ 3.32
FAM228B-208ENST00000613899 ZMYM3Q14202 1370 aa35.76■■■■□ 3.32
FAM228B-208ENST00000613899 GGT6Q6P531 493 aa35.76■■■■□ 3.32
FAM228B-208ENST00000613899 PPP6R1Q9UPN7 881 aa35.75■■■■□ 3.31
FAM228B-208ENST00000613899 TSPY4P0CV99 314 aa35.72■■■■□ 3.31
FAM228B-208ENST00000613899 TSPY10P0CW01 314 aa35.72■■■■□ 3.31
FAM228B-208ENST00000613899 MAST1Q9Y2H9 1570 aa35.71■■■■□ 3.31
FAM228B-208ENST00000613899 FAM135AQ9P2D6 1515 aa35.67■■■■□ 3.3
FAM228B-208ENST00000613899 STRCQ7RTU9 1775 aa35.67■■■■□ 3.3
FAM228B-208ENST00000613899 KIF3BO15066 747 aa35.63■■■■□ 3.29
FAM228B-208ENST00000613899 PTPRKQ15262 1439 aa35.62■■■■□ 3.29
FAM228B-208ENST00000613899 KDM5DQ9BY66 1539 aa35.61■■■■□ 3.29
FAM228B-208ENST00000613899 MYO3AQ8NEV4 1616 aa35.61■■■■□ 3.29
FAM228B-208ENST00000613899 DMRT2Q9Y5R5 561 aa35.6■■■■□ 3.29
FAM228B-208ENST00000613899 ZNF142P52746 1687 aaPredicted RBP35.59■■■■□ 3.29
FAM228B-208ENST00000613899 PTPN23Q9H3S7 1636 aa35.58■■■■□ 3.29
FAM228B-208ENST00000613899 FBXO41Q8TF61 875 aa35.56■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms