RNA–Protein interactions for RNA: ENST00000612195.4

TVP23A-210, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TVP23A, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-210ENST00000612195 SIGLEC1Q9BZZ2 1709 aa27.62■■■□□ 2.01
TVP23A-210ENST00000612195 POGZQ7Z3K3 1410 aa27.62■■■□□ 2.01
TVP23A-210ENST00000612195 PCF11O94913 1555 aaKnown RBP27.6■■■□□ 2.01
TVP23A-210ENST00000612195 EFCAB2Q5VUJ9 269 aa27.6■■■□□ 2.01
TVP23A-210ENST00000612195 LMTK3Q96Q04 1460 aa27.59■■■□□ 2.01
TVP23A-210ENST00000612195 MYO5CQ9NQX4 1742 aa27.59■■■□□ 2.01
TVP23A-210ENST00000612195 PLPPR3Q6T4P5 718 aa27.58■■■□□ 2.01
TVP23A-210ENST00000612195 KIF14Q15058 1648 aa27.58■■■□□ 2.01
TVP23A-210ENST00000612195 MLECQ14165 292 aa27.56■■■□□ 2
TVP23A-210ENST00000612195 TROQ12816 1431 aaPredicted RBP27.54■■■□□ 2
TVP23A-210ENST00000612195 LRRIQ1Q96JM4 1722 aa27.53■■■□□ 2
TVP23A-210ENST00000612195 ATP10AO60312 1499 aa27.51■■□□□ 1.99
TVP23A-210ENST00000612195 CLIP1P30622 1438 aa27.5■■□□□ 1.99
TVP23A-210ENST00000612195 ARHGAP5Q13017 1502 aa27.48■■□□□ 1.99
TVP23A-210ENST00000612195 HSPA2P54652 639 aa27.48■■□□□ 1.99
TVP23A-210ENST00000612195 FBXO41Q8TF61 875 aa27.48■■□□□ 1.99
TVP23A-210ENST00000612195 FER1L4A9Z1Z3 1794 aa27.48■■□□□ 1.99
TVP23A-210ENST00000612195 AFAP1Q8N556 730 aa27.46■■□□□ 1.99
TVP23A-210ENST00000612195 C9orf84Q5VXU9 1444 aa27.46■■□□□ 1.99
TVP23A-210ENST00000612195 ZNF518AQ6AHZ1 1483 aa27.44■■□□□ 1.98
TVP23A-210ENST00000612195 ARHGEF12Q9NZN5 1544 aa27.42■■□□□ 1.98
TVP23A-210ENST00000612195 CASKIN1Q8WXD9 1431 aa27.41■■□□□ 1.98
TVP23A-210ENST00000612195 CDC42BPBQ9Y5S2 1711 aa27.41■■□□□ 1.98
TVP23A-210ENST00000612195 KDM5CP41229 1560 aa27.39■■□□□ 1.98
TVP23A-210ENST00000612195 MYT1LQ9UL68 1186 aa27.39■■□□□ 1.98
TVP23A-210ENST00000612195 CCDC18Q5T9S5 1454 aa27.37■■□□□ 1.97
TVP23A-210ENST00000612195 CEBPAP49715 358 aaPredicted RBP27.35■■□□□ 1.97
TVP23A-210ENST00000612195 PREX2Q70Z35 1606 aa27.34■■□□□ 1.97
TVP23A-210ENST00000612195 DIP2CQ9Y2E4 1556 aa27.32■■□□□ 1.96
TVP23A-210ENST00000612195 TRAPPC8Q9Y2L5 1435 aa27.31■■□□□ 1.96
TVP23A-210ENST00000612195 MLH3Q9UHC1 1453 aa27.31■■□□□ 1.96
TVP23A-210ENST00000612195 ABCC1P33527 1531 aa27.29■■□□□ 1.96
TVP23A-210ENST00000612195 ABCA6Q8N139 1617 aa27.29■■□□□ 1.96
TVP23A-210ENST00000612195 REREQ9P2R6 1566 aa27.27■■□□□ 1.96
TVP23A-210ENST00000612195 FYCO1Q9BQS8 1478 aa27.27■■□□□ 1.96
TVP23A-210ENST00000612195 PREX1Q8TCU6 1659 aa27.27■■□□□ 1.96
TVP23A-210ENST00000612195 CDC42BPAQ5VT25 1732 aa27.26■■□□□ 1.95
TVP23A-210ENST00000612195 ITSN2Q9NZM3 1697 aa27.26■■□□□ 1.95
TVP23A-210ENST00000612195 ZNF777Q9ULD5 760 aaPredicted RBP27.21■■□□□ 1.95
TVP23A-210ENST00000612195 AGLP35573 1532 aa27.2■■□□□ 1.94
TVP23A-210ENST00000612195 KIDINS220Q9ULH0 1771 aa27.2■■□□□ 1.94
TVP23A-210ENST00000612195 SETD1BQ9UPS6 1966 aaKnown RBP27.19■■□□□ 1.94
TVP23A-210ENST00000612195 CERKQ8TCT0 537 aa27.17■■□□□ 1.94
TVP23A-210ENST00000612195 GPATCH8Q9UKJ3 1502 aaKnown RBP27.16■■□□□ 1.94
TVP23A-210ENST00000612195 ESF1Q9H501 851 aaKnown RBP27.16■■□□□ 1.94
TVP23A-210ENST00000612195 UHRF1BP1Q6BDS2 1440 aa27.16■■□□□ 1.94
TVP23A-210ENST00000612195 C3P01024 1663 aa27.15■■□□□ 1.94
TVP23A-210ENST00000612195 SAMD9LQ8IVG5 1584 aa27.15■■□□□ 1.94
TVP23A-210ENST00000612195 HNRNPMP52272 730 aaKnown RBP eCLIP27.13■■□□□ 1.93
TVP23A-210ENST00000612195 STRCQ7RTU9 1775 aa27.12■■□□□ 1.93
TVP23A-210ENST00000612195 SYCP2Q9BX26 1530 aa27.11■■□□□ 1.93
TVP23A-210ENST00000612195 DMRT2Q9Y5R5 561 aa27.1■■□□□ 1.93
TVP23A-210ENST00000612195 SPAG9O60271 1321 aaKnown RBP27.1■■□□□ 1.93
TVP23A-210ENST00000612195 CFDP1Q9UEE9 299 aaPredicted RBP27.08■■□□□ 1.93
TVP23A-210ENST00000612195 CCNB3Q8WWL7 1395 aa27.06■■□□□ 1.92
TVP23A-210ENST00000612195 CNTLNQ9NXG0 1405 aa27.06■■□□□ 1.92
TVP23A-210ENST00000612195 KIAA1107Q9UPP5 1409 aa27.05■■□□□ 1.92
TVP23A-210ENST00000612195 MTUS2Q5JR59 1369 aa27.04■■□□□ 1.92
TVP23A-210ENST00000612195 PLEKHH2Q8IVE3 1493 aa27.02■■□□□ 1.92
TVP23A-210ENST00000612195 SUPT6HQ7KZ85 1726 aaKnown RBP27.02■■□□□ 1.92
TVP23A-210ENST00000612195 ATP7AQ04656 1500 aa27.01■■□□□ 1.91
TVP23A-210ENST00000612195 INO80Q9ULG1 1556 aaPredicted RBP26.97■■□□□ 1.91
TVP23A-210ENST00000612195 ZMYM3Q14202 1370 aa26.97■■□□□ 1.91
TVP23A-210ENST00000612195 ZNF644Q9H582 1327 aaPredicted RBP26.96■■□□□ 1.91
TVP23A-210ENST00000612195 MROH2AA6NES4 1674 aa26.96■■□□□ 1.91
TVP23A-210ENST00000612195 A2MP01023 1474 aa26.96■■□□□ 1.91
TVP23A-210ENST00000612195 PTPRTO14522 1441 aa26.96■■□□□ 1.91
TVP23A-210ENST00000612195 PLXNC1O60486 1568 aa26.95■■□□□ 1.9
TVP23A-210ENST00000612195 NPATQ14207 1427 aa26.93■■□□□ 1.9
TVP23A-210ENST00000612195 TIAM1Q13009 1591 aa26.92■■□□□ 1.9
TVP23A-210ENST00000612195 EHBP1L1Q8N3D4 1523 aa26.91■■□□□ 1.9
TVP23A-210ENST00000612195 GGT6Q6P531 493 aa26.91■■□□□ 1.9
TVP23A-210ENST00000612195 CLTCQ00610 1675 aaKnown RBP26.91■■□□□ 1.9
TVP23A-210ENST00000612195 NCOA1Q15788 1441 aa26.9■■□□□ 1.9
TVP23A-210ENST00000612195 CEP162Q5TB80 1403 aa26.89■■□□□ 1.89
TVP23A-210ENST00000612195 MBD5Q9P267 1494 aa26.88■■□□□ 1.89
TVP23A-210ENST00000612195 ADGBQ8N7X0 1667 aa26.86■■□□□ 1.89
TVP23A-210ENST00000612195 CAMSAP1Q5T5Y3 1602 aa26.86■■□□□ 1.89
TVP23A-210ENST00000612195 PTPRKQ15262 1439 aa26.82■■□□□ 1.88
TVP23A-210ENST00000612195 PPP6R1Q9UPN7 881 aa26.82■■□□□ 1.88
TVP23A-210ENST00000612195 LTBP4Q8N2S1 1624 aa26.82■■□□□ 1.88
TVP23A-210ENST00000612195 NCKAP5LQ9HCH0 1330 aa26.81■■□□□ 1.88
TVP23A-210ENST00000612195 RTEL1-TNFRSF6BF6WH68 1400 aa26.81■■□□□ 1.88
TVP23A-210ENST00000612195 MYO3AQ8NEV4 1616 aa26.79■■□□□ 1.88
TVP23A-210ENST00000612195 NCOA2Q15596 1464 aa26.78■■□□□ 1.88
TVP23A-210ENST00000612195 DHX29Q7Z478 1369 aaKnown RBP26.77■■□□□ 1.88
TVP23A-210ENST00000612195 ZNF142P52746 1687 aaPredicted RBP26.76■■□□□ 1.87
TVP23A-210ENST00000612195 CEP170BQ9Y4F5 1589 aaPredicted RBP26.75■■□□□ 1.87
TVP23A-210ENST00000612195 CAMSAP2Q08AD1 1489 aa26.74■■□□□ 1.87
TVP23A-210ENST00000612195 CCDC141Q6ZP82 1450 aa26.73■■□□□ 1.87
TVP23A-210ENST00000612195 KIF3BO15066 747 aa26.72■■□□□ 1.87
TVP23A-210ENST00000612195 PLA2R1Q13018 1463 aa26.72■■□□□ 1.87
TVP23A-210ENST00000612195 PKD2Q13563 968 aa26.71■■□□□ 1.87
TVP23A-210ENST00000612195 RSPH4AQ5TD94 716 aa26.71■■□□□ 1.87
TVP23A-210ENST00000612195 IQSEC2Q5JU85 1478 aa26.69■■□□□ 1.86
TVP23A-210ENST00000612195 TCOF1Q13428 1488 aaKnown RBP26.68■■□□□ 1.86
TVP23A-210ENST00000612195 ZNF335Q9H4Z2 1342 aaPredicted RBP26.68■■□□□ 1.86
TVP23A-210ENST00000612195 LOC105371045A0A1W2PR82 267 aa26.66■■□□□ 1.86
TVP23A-210ENST00000612195 FBXO31Q5XUX0 539 aaPredicted RBP26.66■■□□□ 1.86
TVP23A-210ENST00000612195 A2ML1A8K2U0 1454 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms