RNA–Protein interactions for RNA: ENST00000611255.4

LRMDA-215, Transcript of leucine rich melanocyte differentiation associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRMDA, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-215ENST00000611255 FMN1Q68DA7 1419 aa37.44■■■■□ 3.58
LRMDA-215ENST00000611255 ATP1B4Q9UN42 357 aaPredicted RBP37.44■■■■□ 3.58
LRMDA-215ENST00000611255 ARHGAP35Q9NRY4 1499 aa37.42■■■■□ 3.58
LRMDA-215ENST00000611255 PLPPR3Q6T4P5 718 aa37.38■■■■□ 3.57
LRMDA-215ENST00000611255 MLECQ14165 292 aa37.36■■■■□ 3.57
LRMDA-215ENST00000611255 EFCAB2Q5VUJ9 269 aa37.36■■■■□ 3.57
LRMDA-215ENST00000611255 HSPA2P54652 639 aa37.35■■■■□ 3.57
LRMDA-215ENST00000611255 CDK11AQ9UQ88 783 aaPredicted RBP37.35■■■■□ 3.57
LRMDA-215ENST00000611255 MYO5CQ9NQX4 1742 aa37.33■■■■□ 3.57
LRMDA-215ENST00000611255 ATP10AO60312 1499 aa37.31■■■■□ 3.56
LRMDA-215ENST00000611255 KIF14Q15058 1648 aa37.3■■■■□ 3.56
LRMDA-215ENST00000611255 CHIC1Q5VXU3 224 aa37.29■■■■□ 3.56
LRMDA-215ENST00000611255 FER1L4A9Z1Z3 1794 aa37.27■■■■□ 3.56
LRMDA-215ENST00000611255 TROQ12816 1431 aaPredicted RBP37.27■■■■□ 3.56
LRMDA-215ENST00000611255 C9orf84Q5VXU9 1444 aa37.25■■■■□ 3.55
LRMDA-215ENST00000611255 ARHGEF12Q9NZN5 1544 aa37.24■■■■□ 3.55
LRMDA-215ENST00000611255 LRRIQ1Q96JM4 1722 aa37.2■■■■□ 3.55
LRMDA-215ENST00000611255 AFAP1Q8N556 730 aa37.19■■■■□ 3.54
LRMDA-215ENST00000611255 ZNF518AQ6AHZ1 1483 aa37.19■■■■□ 3.54
LRMDA-215ENST00000611255 ARHGAP5Q13017 1502 aa37.18■■■■□ 3.54
LRMDA-215ENST00000611255 CLIP1P30622 1438 aa37.17■■■■□ 3.54
LRMDA-215ENST00000611255 KDM5CP41229 1560 aa37.15■■■■□ 3.54
LRMDA-215ENST00000611255 CEBPAP49715 358 aaPredicted RBP37.11■■■■□ 3.53
LRMDA-215ENST00000611255 CDC42BPBQ9Y5S2 1711 aa37.08■■■■□ 3.53
LRMDA-215ENST00000611255 DIP2CQ9Y2E4 1556 aa37.04■■■■□ 3.52
LRMDA-215ENST00000611255 MYT1LQ9UL68 1186 aa37.04■■■■□ 3.52
LRMDA-215ENST00000611255 PREX1Q8TCU6 1659 aa37.03■■■■□ 3.52
LRMDA-215ENST00000611255 CASKIN1Q8WXD9 1431 aa37.02■■■■□ 3.52
LRMDA-215ENST00000611255 MLH3Q9UHC1 1453 aa37.01■■■■□ 3.52
LRMDA-215ENST00000611255 CERKQ8TCT0 537 aa37.01■■■■□ 3.52
LRMDA-215ENST00000611255 REREQ9P2R6 1566 aa37■■■■□ 3.51
LRMDA-215ENST00000611255 TRAPPC8Q9Y2L5 1435 aa36.98■■■■□ 3.51
LRMDA-215ENST00000611255 CCDC18Q5T9S5 1454 aa36.98■■■■□ 3.51
LRMDA-215ENST00000611255 PREX2Q70Z35 1606 aa36.98■■■■□ 3.51
LRMDA-215ENST00000611255 ABCA6Q8N139 1617 aa36.97■■■■□ 3.51
LRMDA-215ENST00000611255 ABCC1P33527 1531 aa36.95■■■■□ 3.51
LRMDA-215ENST00000611255 SETD1BQ9UPS6 1966 aaKnown RBP36.92■■■■□ 3.5
LRMDA-215ENST00000611255 ITSN2Q9NZM3 1697 aa36.9■■■■□ 3.5
LRMDA-215ENST00000611255 AGLP35573 1532 aa36.89■■■■□ 3.5
LRMDA-215ENST00000611255 UHRF1BP1Q6BDS2 1440 aa36.88■■■■□ 3.49
LRMDA-215ENST00000611255 STRCQ7RTU9 1775 aa36.87■■■■□ 3.49
LRMDA-215ENST00000611255 CDC42BPAQ5VT25 1732 aa36.87■■■■□ 3.49
LRMDA-215ENST00000611255 KIDINS220Q9ULH0 1771 aa36.84■■■■□ 3.49
LRMDA-215ENST00000611255 C3P01024 1663 aa36.83■■■■□ 3.49
LRMDA-215ENST00000611255 DMRT2Q9Y5R5 561 aa36.83■■■■□ 3.49
LRMDA-215ENST00000611255 FYCO1Q9BQS8 1478 aa36.82■■■■□ 3.49
LRMDA-215ENST00000611255 ESF1Q9H501 851 aaKnown RBP36.79■■■■□ 3.48
LRMDA-215ENST00000611255 SAMD9LQ8IVG5 1584 aa36.75■■■■□ 3.47
LRMDA-215ENST00000611255 ZNF777Q9ULD5 760 aaPredicted RBP36.75■■■■□ 3.47
LRMDA-215ENST00000611255 GPATCH8Q9UKJ3 1502 aaKnown RBP36.74■■■■□ 3.47
LRMDA-215ENST00000611255 CNTLNQ9NXG0 1405 aa36.7■■■■□ 3.47
LRMDA-215ENST00000611255 HNRNPMP52272 730 aaKnown RBP eCLIP36.69■■■■□ 3.467e-7■■■■□ 19.6
LRMDA-215ENST00000611255 SYCP2Q9BX26 1530 aa36.68■■■■□ 3.46
LRMDA-215ENST00000611255 PTPRTO14522 1441 aa36.68■■■■□ 3.46
LRMDA-215ENST00000611255 SPAG9O60271 1321 aaKnown RBP36.66■■■■□ 3.46
LRMDA-215ENST00000611255 KIAA1107Q9UPP5 1409 aa36.61■■■■□ 3.45
LRMDA-215ENST00000611255 CFDP1Q9UEE9 299 aaPredicted RBP36.6■■■■□ 3.45
LRMDA-215ENST00000611255 MROH2AA6NES4 1674 aa36.58■■■■□ 3.45
LRMDA-215ENST00000611255 ZMYM3Q14202 1370 aa36.57■■■■□ 3.45
LRMDA-215ENST00000611255 NPATQ14207 1427 aa36.57■■■■□ 3.44
LRMDA-215ENST00000611255 SUPT6HQ7KZ85 1726 aaKnown RBP36.56■■■■□ 3.44
LRMDA-215ENST00000611255 ATP7AQ04656 1500 aa36.56■■■■□ 3.44
LRMDA-215ENST00000611255 NCOA1Q15788 1441 aa36.56■■■■□ 3.44
LRMDA-215ENST00000611255 PLEKHH2Q8IVE3 1493 aa36.56■■■■□ 3.44
LRMDA-215ENST00000611255 CCNB3Q8WWL7 1395 aa36.55■■■■□ 3.44
LRMDA-215ENST00000611255 INO80Q9ULG1 1556 aaPredicted RBP36.53■■■■□ 3.44
LRMDA-215ENST00000611255 PLXNC1O60486 1568 aa36.51■■■■□ 3.44
LRMDA-215ENST00000611255 LTBP4Q8N2S1 1624 aa36.51■■■■□ 3.43
LRMDA-215ENST00000611255 A2MP01023 1474 aa36.5■■■■□ 3.43
LRMDA-215ENST00000611255 MTUS2Q5JR59 1369 aa36.5■■■■□ 3.43
LRMDA-215ENST00000611255 CAMSAP1Q5T5Y3 1602 aa36.46■■■■□ 3.43
LRMDA-215ENST00000611255 CLTCQ00610 1675 aaKnown RBP36.45■■■■□ 3.43
LRMDA-215ENST00000611255 ZNF644Q9H582 1327 aaPredicted RBP36.43■■■■□ 3.42
LRMDA-215ENST00000611255 GGT6Q6P531 493 aa36.42■■■■□ 3.42
LRMDA-215ENST00000611255 TIAM1Q13009 1591 aa36.4■■■■□ 3.42
LRMDA-215ENST00000611255 PTPRKQ15262 1439 aa36.39■■■■□ 3.42
LRMDA-215ENST00000611255 NCKAP5LQ9HCH0 1330 aa36.38■■■■□ 3.41
LRMDA-215ENST00000611255 MBD5Q9P267 1494 aa36.38■■■■□ 3.41
LRMDA-215ENST00000611255 IQSEC2Q5JU85 1478 aa36.37■■■■□ 3.41
LRMDA-215ENST00000611255 PPP6R1Q9UPN7 881 aa36.36■■■■□ 3.41
LRMDA-215ENST00000611255 ADGBQ8N7X0 1667 aa36.35■■■■□ 3.41
LRMDA-215ENST00000611255 MYO3AQ8NEV4 1616 aa36.34■■■■□ 3.41
LRMDA-215ENST00000611255 EHBP1L1Q8N3D4 1523 aa36.34■■■■□ 3.41
LRMDA-215ENST00000611255 ZNF142P52746 1687 aaPredicted RBP36.33■■■■□ 3.41
LRMDA-215ENST00000611255 DISP3Q9P2K9 1392 aa36.33■■■■□ 3.41
LRMDA-215ENST00000611255 CEP162Q5TB80 1403 aa36.31■■■■□ 3.4
LRMDA-215ENST00000611255 RTEL1-TNFRSF6BF6WH68 1400 aa36.3■■■■□ 3.4
LRMDA-215ENST00000611255 PLA2R1Q13018 1463 aa36.3■■■■□ 3.4
LRMDA-215ENST00000611255 CEP170BQ9Y4F5 1589 aaPredicted RBP36.29■■■■□ 3.4
LRMDA-215ENST00000611255 PKD2Q13563 968 aa36.29■■■■□ 3.4
LRMDA-215ENST00000611255 ILDR2Q71H61 639 aa36.27■■■■□ 3.4
LRMDA-215ENST00000611255 TCOF1Q13428 1488 aaKnown RBP36.26■■■■□ 3.4
LRMDA-215ENST00000611255 ZNF335Q9H4Z2 1342 aaPredicted RBP36.26■■■■□ 3.39
LRMDA-215ENST00000611255 DHX29Q7Z478 1369 aaKnown RBP36.26■■■■□ 3.39
LRMDA-215ENST00000611255 A2ML1A8K2U0 1454 aa36.17■■■■□ 3.38
LRMDA-215ENST00000611255 NCOA2Q15596 1464 aa36.16■■■■□ 3.38
LRMDA-215ENST00000611255 KIF3BO15066 747 aa36.15■■■■□ 3.38
LRMDA-215ENST00000611255 CCDC141Q6ZP82 1450 aa36.14■■■■□ 3.38
LRMDA-215ENST00000611255 DNMT1P26358 1616 aaKnown RBP36.13■■■■□ 3.37
LRMDA-215ENST00000611255 FBXO31Q5XUX0 539 aaPredicted RBP36.12■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 229.5 ms