RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-205ENST00000611150 TARBP1Q13395 1621 aaKnown RBP22.55■■□□□ 1.2
CDK11B-205ENST00000611150 MAP7D2Q96T17 732 aa22.55■■□□□ 1.2
CDK11B-205ENST00000611150 CUX1P39880 1505 aa22.52■■□□□ 1.2
CDK11B-205ENST00000611150 ZFP91Q96JP5 570 aaPredicted RBP22.52■■□□□ 1.2
CDK11B-205ENST00000611150 BACH2Q9BYV9 841 aa22.52■■□□□ 1.2
CDK11B-205ENST00000611150 EIF4G3O43432 1585 aaKnown RBP22.51■■□□□ 1.19
CDK11B-205ENST00000611150 FRAT2O75474 233 aaPredicted RBP22.5■■□□□ 1.19
CDK11B-205ENST00000611150 ARID4BQ4LE39 1312 aaPredicted RBP22.5■■□□□ 1.19
CDK11B-205ENST00000611150 TEX2Q8IWB9 1127 aa22.49■■□□□ 1.19
CDK11B-205ENST00000611150 SIN3AQ96ST3 1273 aa22.49■■□□□ 1.19
CDK11B-205ENST00000611150 SOGA1O94964 1423 aa22.48■■□□□ 1.19
CDK11B-205ENST00000611150 FGD5Q6ZNL6 1462 aa22.48■■□□□ 1.19
CDK11B-205ENST00000611150 ZHX1Q9UKY1 873 aaPredicted RBP22.48■■□□□ 1.19
CDK11B-205ENST00000611150 RAD54L2Q9Y4B4 1467 aa22.47■■□□□ 1.19
CDK11B-205ENST00000611150 MS4A1P11836 297 aa22.47■■□□□ 1.19
CDK11B-205ENST00000611150 UTP14CQ5TAP6 766 aaKnown RBP22.47■■□□□ 1.19
CDK11B-205ENST00000611150 OSCARQ8IYS5 282 aa22.46■■□□□ 1.19
CDK11B-205ENST00000611150 AQRO60306 1485 aaKnown RBP eCLIP22.45■■□□□ 1.184e-7■■■■■ 29.4
CDK11B-205ENST00000611150 TMEM51Q9NW97 253 aa22.43■■□□□ 1.18
CDK11B-205ENST00000611150 CHRM1P11229 460 aaPredicted RBP22.4■■□□□ 1.18
CDK11B-205ENST00000611150 PLCD3Q8N3E9 789 aa22.4■■□□□ 1.18
CDK11B-205ENST00000611150 ZBED9Q6R2W3 1325 aa22.39■■□□□ 1.18
CDK11B-205ENST00000611150 ZNF830Q96NB3 372 aaPredicted RBP22.39■■□□□ 1.18
CDK11B-205ENST00000611150 TNNT2P45379 298 aaPredicted RBP22.39■■□□□ 1.17
CDK11B-205ENST00000611150 HOMEZQ8IX15 550 aa22.39■■□□□ 1.17
CDK11B-205ENST00000611150 TDRD9Q8NDG6 1382 aaKnown RBP22.38■■□□□ 1.17
CDK11B-205ENST00000611150 FOXD1Q16676 465 aa22.37■■□□□ 1.17
CDK11B-205ENST00000611150 WDR97A6NE52 1622 aa22.37■■□□□ 1.17
CDK11B-205ENST00000611150 DMTNQ08495 405 aa22.36■■□□□ 1.17
CDK11B-205ENST00000611150 PPP4R3BQ5MIZ7 849 aa22.35■■□□□ 1.17
CDK11B-205ENST00000611150 SECISBP2LQ93073 1101 aaKnown RBP22.35■■□□□ 1.17
CDK11B-205ENST00000611150 ESPNB1AK53 854 aa22.34■■□□□ 1.17
CDK11B-205ENST00000611150 POGKQ9P215 609 aa22.34■■□□□ 1.17
CDK11B-205ENST00000611150 SAMD1Q6SPF0 538 aaPredicted RBP22.33■■□□□ 1.17
CDK11B-205ENST00000611150 MTERF4Q7Z6M4 381 aaKnown RBP22.32■■□□□ 1.16
CDK11B-205ENST00000611150 RNF123Q5XPI4 1314 aa22.31■■□□□ 1.16
CDK11B-205ENST00000611150 XRCC6P12956 609 aaKnown RBP eCLIP22.31■■□□□ 1.16
CDK11B-205ENST00000611150 SLC4A3P48751 1232 aa22.31■■□□□ 1.16
CDK11B-205ENST00000611150 ANP32BQ92688 251 aaKnown RBP22.3■■□□□ 1.16
CDK11B-205ENST00000611150 BCCIPQ9P287 314 aaKnown RBP eCLIP22.3■■□□□ 1.16
CDK11B-205ENST00000611150 GOLGA6L3A6NEY3 463 aa22.29■■□□□ 1.16
CDK11B-205ENST00000611150 KIAA1211Q6ZU35 1233 aa22.28■■□□□ 1.16
CDK11B-205ENST00000611150 VGLL3A8MV65 326 aa22.28■■□□□ 1.16
CDK11B-205ENST00000611150 TOP2BQ02880 1626 aa22.28■■□□□ 1.16
CDK11B-205ENST00000611150 BIVM-ERCC5R4GMW8 1640 aa22.28■■□□□ 1.16
CDK11B-205ENST00000611150 CHD1O14646 1710 aa22.27■■□□□ 1.16
CDK11B-205ENST00000611150 KIF20AO95235 890 aa22.26■■□□□ 1.15
CDK11B-205ENST00000611150 ABCA10Q8WWZ4 1543 aa22.26■■□□□ 1.15
CDK11B-205ENST00000611150 VGFO15240 615 aaPredicted RBP22.26■■□□□ 1.15
CDK11B-205ENST00000611150 TERF1P54274 439 aa22.25■■□□□ 1.15
CDK11B-205ENST00000611150 SYNJ1O43426 1573 aa22.25■■□□□ 1.15
CDK11B-205ENST00000611150 GRIN2BQ13224 1484 aa22.25■■□□□ 1.15
CDK11B-205ENST00000611150 SNAPC4Q5SXM2 1469 aa22.24■■□□□ 1.15
CDK11B-205ENST00000611150 FBLN2P98095 1184 aa22.24■■□□□ 1.15
CDK11B-205ENST00000611150 SMG6Q86US8 1419 aaKnown RBP22.23■■□□□ 1.15
CDK11B-205ENST00000611150 GAPVD1Q14C86 1478 aa22.22■■□□□ 1.15
CDK11B-205ENST00000611150 HAP1P54257 671 aaPredicted RBP22.21■■□□□ 1.15
CDK11B-205ENST00000611150 AKNAQ7Z591 1439 aa22.21■■□□□ 1.15
CDK11B-205ENST00000611150 MAGI1Q96QZ7 1491 aaPredicted RBP22.21■■□□□ 1.15
CDK11B-205ENST00000611150 UBTFP17480 764 aaKnown RBP22.21■■□□□ 1.15
CDK11B-205ENST00000611150 FAM13BQ9NYF5 915 aa22.2■■□□□ 1.15
CDK11B-205ENST00000611150 CDK11BP21127 795 aaKnown RBP22.2■■□□□ 1.14
CDK11B-205ENST00000611150 TAF3Q5VWG9 929 aa22.2■■□□□ 1.14
CDK11B-205ENST00000611150 HIRIP3Q9BW71 556 aaPredicted RBP22.2■■□□□ 1.14
CDK11B-205ENST00000611150 PRDM10Q9NQV6 1147 aa22.2■■□□□ 1.14
CDK11B-205ENST00000611150 FSD2A1L4K1 749 aa22.19■■□□□ 1.14
CDK11B-205ENST00000611150 ABCA5Q8WWZ7 1642 aa22.19■■□□□ 1.14
CDK11B-205ENST00000611150 PBRM1Q86U86 1689 aa22.19■■□□□ 1.14
CDK11B-205ENST00000611150 RIPK4P57078 832 aa22.18■■□□□ 1.14
CDK11B-205ENST00000611150 PANK2Q9BZ23 570 aa22.16■■□□□ 1.14
CDK11B-205ENST00000611150 GTPBP4Q9BZE4 634 aaKnown RBP22.16■■□□□ 1.14
CDK11B-205ENST00000611150 ZSCAN20P17040 1043 aaPredicted RBP22.16■■□□□ 1.14
CDK11B-205ENST00000611150 TRIM44Q96DX7 344 aaPredicted RBP22.16■■□□□ 1.14
CDK11B-205ENST00000611150 MYH16Q9H6N6 1097 aa22.15■■□□□ 1.14
CDK11B-205ENST00000611150 LETM1O95202 739 aaPredicted RBP22.14■■□□□ 1.14
CDK11B-205ENST00000611150 CHMP7Q8WUX9 453 aaPredicted RBP22.14■■□□□ 1.14
CDK11B-205ENST00000611150 ERBB4Q15303 1308 aa22.14■■□□□ 1.13
CDK11B-205ENST00000611150 IRX3P78415 501 aaPredicted RBP22.14■■□□□ 1.13
CDK11B-205ENST00000611150 RNF216Q9NWF9 866 aaPredicted RBP22.13■■□□□ 1.13
CDK11B-205ENST00000611150 TULP1O00294 542 aaPredicted RBP22.13■■□□□ 1.13
CDK11B-205ENST00000611150 RGS22Q8NE09 1264 aa22.13■■□□□ 1.13
CDK11B-205ENST00000611150 NUDCQ9Y266 331 aa22.13■■□□□ 1.13
CDK11B-205ENST00000611150 MRE11P49959 708 aa22.12■■□□□ 1.13
CDK11B-205ENST00000611150 SYNJ2O15056 1496 aa22.12■■□□□ 1.13
CDK11B-205ENST00000611150 RIMBP3CA6NJZ7 1639 aa22.12■■□□□ 1.13
CDK11B-205ENST00000611150 RIMBP3BA6NNM3 1639 aa22.12■■□□□ 1.13
CDK11B-205ENST00000611150 RIMBP3Q9UFD9 1639 aa22.12■■□□□ 1.13
CDK11B-205ENST00000611150 MAPKBP1O60336 1514 aa22.11■■□□□ 1.13
CDK11B-205ENST00000611150 DNTTIP2Q5QJE6 756 aaKnown RBP22.1■■□□□ 1.13
CDK11B-205ENST00000611150 FAM9BQ8IZU0 186 aa22.1■■□□□ 1.13
CDK11B-205ENST00000611150 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.1■■□□□ 1.13
CDK11B-205ENST00000611150 ARHGEF11O15085 1522 aa22.09■■□□□ 1.13
CDK11B-205ENST00000611150 VPS8Q8N3P4 1428 aa22.08■■□□□ 1.13
CDK11B-205ENST00000611150 OFD1O75665 1012 aa22.07■■□□□ 1.12
CDK11B-205ENST00000611150 CCDC94Q9BW85 323 aaPredicted RBP22.04■■□□□ 1.12
CDK11B-205ENST00000611150 CLIP1P30622 1438 aa22.04■■□□□ 1.12
CDK11B-205ENST00000611150 CLASP1Q7Z460 1538 aa22.02■■□□□ 1.12
CDK11B-205ENST00000611150 GOLGA3Q08378 1498 aa22.02■■□□□ 1.12
CDK11B-205ENST00000611150 CNKSR2Q8WXI2 1034 aa22.02■■□□□ 1.11
CDK11B-205ENST00000611150 ISY1Q9ULR0 285 aaKnown RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms