RNA–Protein interactions for RNA: ENST00000611127.4

FAM228B-205, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene FAM228B, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-205ENST00000611127 LCE2DQ5TA82 110 aaPredicted RBP15.21■□□□□ 0.03
FAM228B-205ENST00000611127 POTEGQ6S5H5 508 aa15.2■□□□□ 0.02
FAM228B-205ENST00000611127 SHROOM4Q9ULL8 1493 aa15.18■□□□□ 0.02
FAM228B-205ENST00000611127 SCRIBQ14160 1630 aa15.17■□□□□ 0.02
FAM228B-205ENST00000611127 RYDENQ9NUL5 291 aaKnown RBP15.17■□□□□ 0.02
FAM228B-205ENST00000611127 ST18O60284 1047 aa15.15■□□□□ 0.02
FAM228B-205ENST00000611127 PCDH10Q9P2E7 1040 aa15.14■□□□□ 0.01
FAM228B-205ENST00000611127 AMER1Q5JTC6 1135 aaPredicted RBP15.13■□□□□ 0.01
FAM228B-205ENST00000611127 DOK7Q18PE1 504 aa15.08■□□□□ 0
FAM228B-205ENST00000611127 TMEM92Q6UXU6 159 aa15.05■□□□□ -0
FAM228B-205ENST00000611127 RIMBP2O15034 1052 aa15.04■□□□□ -0
FAM228B-205ENST00000611127 HOXB3P14651 431 aaPredicted RBP15.01□□□□□ -0.01
FAM228B-205ENST00000611127 ZNF710Q8N1W2 664 aa15.01□□□□□ -0.01
FAM228B-205ENST00000611127 NKX1-1Q15270 411 aaPredicted RBP15□□□□□ -0.01
FAM228B-205ENST00000611127 ZSWIM6Q9HCJ5 1215 aa14.99□□□□□ -0.01
FAM228B-205ENST00000611127 PPP1R37O75864 691 aa14.98□□□□□ -0.01
FAM228B-205ENST00000611127 KIF3CO14782 793 aa14.96□□□□□ -0.01
FAM228B-205ENST00000611127 TMC2Q8TDI7 906 aa14.95□□□□□ -0.02
FAM228B-205ENST00000611127 HOXB1P14653 301 aaPredicted RBP14.93□□□□□ -0.02
FAM228B-205ENST00000611127 EMP3P54852 163 aa14.93□□□□□ -0.02
FAM228B-205ENST00000611127 C2orf72A6NCS6 295 aa14.92□□□□□ -0.02
FAM228B-205ENST00000611127 EIF4G1Q04637 1599 aaKnown RBP14.92□□□□□ -0.02
FAM228B-205ENST00000611127 MARVELD3Q96A59 401 aa14.9□□□□□ -0.02
FAM228B-205ENST00000611127 CC2D2AQ9P2K1 1620 aa14.88□□□□□ -0.03
FAM228B-205ENST00000611127 RTN4Q9NQC3 1192 aaKnown RBP14.88□□□□□ -0.03
FAM228B-205ENST00000611127 CECR2Q9BXF3 1484 aa14.88□□□□□ -0.03
FAM228B-205ENST00000611127 CDAN1Q8IWY9 1227 aa14.87□□□□□ -0.03
FAM228B-205ENST00000611127 GTPBP6O43824 516 aaPredicted RBP14.85□□□□□ -0.03
FAM228B-205ENST00000611127 SLC34A2O95436 690 aa14.83□□□□□ -0.04
FAM228B-205ENST00000611127 GPHNQ9NQX3 736 aaPredicted RBP14.82□□□□□ -0.04
FAM228B-205ENST00000611127 GPR153Q6NV75 609 aa14.81□□□□□ -0.04
FAM228B-205ENST00000611127 FOXK1P85037 733 aa14.8□□□□□ -0.04
FAM228B-205ENST00000611127 BBXQ8WY36 941 aaPredicted RBP14.79□□□□□ -0.04
FAM228B-205ENST00000611127 FAM205CA6NFA0 338 aa14.77□□□□□ -0.05
FAM228B-205ENST00000611127 HS3ST6Q96QI5 342 aa14.77□□□□□ -0.05
FAM228B-205ENST00000611127 ERBB3P21860 1342 aa14.75□□□□□ -0.05
FAM228B-205ENST00000611127 CRISPLD2Q9H0B8 497 aa14.73□□□□□ -0.05
FAM228B-205ENST00000611127 ARSIQ5FYB1 569 aa14.72□□□□□ -0.05
FAM228B-205ENST00000611127 PLSCR2Q9NRY7 297 aa14.71□□□□□ -0.05
FAM228B-205ENST00000611127 PDE4AP27815 886 aa14.7□□□□□ -0.06
FAM228B-205ENST00000611127 PLPP6Q8IY26 295 aa14.7□□□□□ -0.06
FAM228B-205ENST00000611127 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.7□□□□□ -0.06
FAM228B-205ENST00000611127 DSG2Q14126 1118 aa14.69□□□□□ -0.06
FAM228B-205ENST00000611127 PTCD2Q8WV60 388 aaKnown RBP14.68□□□□□ -0.06
FAM228B-205ENST00000611127 PCDHGA4Q9Y5G9 962 aa14.68□□□□□ -0.06
FAM228B-205ENST00000611127 POTEB3A0JP26 581 aa14.66□□□□□ -0.06
FAM228B-205ENST00000611127 POTEBQ6S5H4 581 aa14.66□□□□□ -0.06
FAM228B-205ENST00000611127 VARS2Q5ST30 1063 aaKnown RBP14.65□□□□□ -0.06
FAM228B-205ENST00000611127 TBC1D12O60347 775 aa14.64□□□□□ -0.07
FAM228B-205ENST00000611127 ZNF316A6NFI3 1004 aaPredicted RBP14.63□□□□□ -0.07
FAM228B-205ENST00000611127 PPP1R15BQ5SWA1 713 aa14.62□□□□□ -0.07
FAM228B-205ENST00000611127 NCKAP5LQ9HCH0 1330 aa14.62□□□□□ -0.07
FAM228B-205ENST00000611127 SPRYD3Q8NCJ5 442 aa14.61□□□□□ -0.07
FAM228B-205ENST00000611127 ZNF687Q8N1G0 1237 aa14.6□□□□□ -0.07
FAM228B-205ENST00000611127 PSDA5PKW4 1024 aaPredicted RBP14.59□□□□□ -0.07
FAM228B-205ENST00000611127 NUDT7P0C024 238 aa14.59□□□□□ -0.07
FAM228B-205ENST00000611127 KHSRPQ92945 711 aaKnown RBP eCLIP14.59□□□□□ -0.07
FAM228B-205ENST00000611127 DDX27Q96GQ7 796 aaKnown RBP14.58□□□□□ -0.08
FAM228B-205ENST00000611127 NCAPD3P42695 1498 aa14.57□□□□□ -0.08
FAM228B-205ENST00000611127 MFSD10Q14728 455 aa14.57□□□□□ -0.08
FAM228B-205ENST00000611127 LARP6Q9BRS8 491 aaKnown RBP14.56□□□□□ -0.08
FAM228B-205ENST00000611127 KRTAP3-3Q9BYR6 98 aa14.56□□□□□ -0.08
FAM228B-205ENST00000611127 KRTAP3-2Q9BYR7 98 aa14.56□□□□□ -0.08
FAM228B-205ENST00000611127 ATAD2BQ9ULI0 1458 aa14.53□□□□□ -0.08
FAM228B-205ENST00000611127 OXER1Q8TDS5 423 aa14.53□□□□□ -0.08
FAM228B-205ENST00000611127 KDM4FA0A1W2PPD8 638 aa14.52□□□□□ -0.09
FAM228B-205ENST00000611127 LHX6Q9UPM6 363 aa14.51□□□□□ -0.09
FAM228B-205ENST00000611127 SMARCA4P51532 1647 aa14.51□□□□□ -0.09
FAM228B-205ENST00000611127 BAZ1AQ9NRL2 1556 aaPredicted RBP14.51□□□□□ -0.09
FAM228B-205ENST00000611127 SMARCA2P51531 1590 aa14.49□□□□□ -0.09
FAM228B-205ENST00000611127 PBX2P40425 430 aa14.49□□□□□ -0.09
FAM228B-205ENST00000611127 SPNS2Q8IVW8 549 aa14.49□□□□□ -0.09
FAM228B-205ENST00000611127 CADPS2Q86UW7 1296 aa14.47□□□□□ -0.09
FAM228B-205ENST00000611127 PAXIP1Q6ZW49 1069 aaPredicted RBP14.44□□□□□ -0.1
FAM228B-205ENST00000611127 UPF1Q92900 1129 aaKnown RBP eCLIP14.44□□□□□ -0.1
FAM228B-205ENST00000611127 HMGXB3Q12766 1538 aa14.43□□□□□ -0.1
FAM228B-205ENST00000611127 PPP4R3BQ5MIZ7 849 aa14.41□□□□□ -0.1
FAM228B-205ENST00000611127 CFAP44Q96MT7 982 aa14.41□□□□□ -0.1
FAM228B-205ENST00000611127 MROH2BQ7Z745 1585 aa14.4□□□□□ -0.1
FAM228B-205ENST00000611127 BAZ1BQ9UIG0 1483 aaKnown RBP14.4□□□□□ -0.1
FAM228B-205ENST00000611127 PTGER2P43116 358 aa14.39□□□□□ -0.11
FAM228B-205ENST00000611127 MMRN1Q13201 1228 aa14.39□□□□□ -0.11
FAM228B-205ENST00000611127 PEG3Q9GZU2 1588 aa14.39□□□□□ -0.11
FAM228B-205ENST00000611127 MAP3K9P80192 1104 aa14.37□□□□□ -0.11
FAM228B-205ENST00000611127 CAMK2BQ13554 666 aa14.37□□□□□ -0.11
FAM228B-205ENST00000611127 ANO8Q9HCE9 1232 aaPredicted RBP14.37□□□□□ -0.11
FAM228B-205ENST00000611127 LSM11P83369 360 aaKnown RBP eCLIP14.35□□□□□ -0.11
FAM228B-205ENST00000611127 ARHGAP33O14559 1287 aa14.33□□□□□ -0.12
FAM228B-205ENST00000611127 EVI5O60447 810 aa14.33□□□□□ -0.12
FAM228B-205ENST00000611127 EMILIN3Q9NT22 766 aa14.33□□□□□ -0.12
FAM228B-205ENST00000611127 KCNH8Q96L42 1107 aa14.32□□□□□ -0.12
FAM228B-205ENST00000611127 ANKRD13DQ6ZTN6 518 aa14.29□□□□□ -0.12
FAM228B-205ENST00000611127 JPH4Q96JJ6 628 aa14.29□□□□□ -0.12
FAM228B-205ENST00000611127 ERCC6Q03468 1493 aa14.27□□□□□ -0.12
FAM228B-205ENST00000611127 FOSBP53539 338 aa14.27□□□□□ -0.13
FAM228B-205ENST00000611127 POTEEQ6S8J3 1075 aa14.27□□□□□ -0.13
FAM228B-205ENST00000611127 ZNF454Q8N9F8 522 aa14.27□□□□□ -0.13
FAM228B-205ENST00000611127 WDR70Q9NW82 654 aa14.26□□□□□ -0.13
FAM228B-205ENST00000611127 BCL2L12Q9HB09 334 aa14.25□□□□□ -0.13
FAM228B-205ENST00000611127 TK2O00142 265 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms