RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 NBPF8Q3BBV2 869 aa23.24■■□□□ 1.31
TNIP1-220ENST00000610535 NCOA1Q15788 1441 aa23.23■■□□□ 1.31
TNIP1-220ENST00000610535 ARHGEF11O15085 1522 aa23.23■■□□□ 1.31
TNIP1-220ENST00000610535 ZBED9Q6R2W3 1325 aa23.21■■□□□ 1.31
TNIP1-220ENST00000610535 HECW1Q76N89 1606 aa23.21■■□□□ 1.31
TNIP1-220ENST00000610535 MRC2Q9UBG0 1479 aa23.21■■□□□ 1.31
TNIP1-220ENST00000610535 THOC2Q8NI27 1593 aaKnown RBP23.2■■□□□ 1.3
TNIP1-220ENST00000610535 TCOF1Q13428 1488 aaKnown RBP23.2■■□□□ 1.3
TNIP1-220ENST00000610535 GCC2Q8IWJ2 1684 aa23.18■■□□□ 1.3
TNIP1-220ENST00000610535 CNGB1Q14028 1251 aaPredicted RBP23.18■■□□□ 1.3
TNIP1-220ENST00000610535 ERCC6Q03468 1493 aa23.17■■□□□ 1.3
TNIP1-220ENST00000610535 KIF7Q2M1P5 1343 aa23.16■■□□□ 1.3
TNIP1-220ENST00000610535 AKNAQ7Z591 1439 aa23.13■■□□□ 1.29
TNIP1-220ENST00000610535 ANKRD30BQ9BXX2 1392 aa23.12■■□□□ 1.29
TNIP1-220ENST00000610535 PBRM1Q86U86 1689 aa23.09■■□□□ 1.29
TNIP1-220ENST00000610535 CDK13Q14004 1512 aaKnown RBP23.09■■□□□ 1.29
TNIP1-220ENST00000610535 SENP3-EIF4A1A0A087X0R7 540 aa23.09■■□□□ 1.29
TNIP1-220ENST00000610535 EPRSP07814 1512 aaKnown RBP23.09■■□□□ 1.29
TNIP1-220ENST00000610535 SPATA31E1Q6ZUB1 1445 aa23.08■■□□□ 1.29
TNIP1-220ENST00000610535 RPRD2Q5VT52 1461 aaKnown RBP23.08■■□□□ 1.28
TNIP1-220ENST00000610535 SLC4A1APQ9BWU0 796 aaKnown RBP23.08■■□□□ 1.28
TNIP1-220ENST00000610535 MIA2Q96PC5 1412 aa23.07■■□□□ 1.28
TNIP1-220ENST00000610535 POLR3GLQ9BT43 218 aa23.05■■□□□ 1.28
TNIP1-220ENST00000610535 ZNF644Q9H582 1327 aaPredicted RBP23.05■■□□□ 1.28
TNIP1-220ENST00000610535 TEX14Q8IWB6 1497 aa23.05■■□□□ 1.28
TNIP1-220ENST00000610535 CHMP7Q8WUX9 453 aaPredicted RBP23.02■■□□□ 1.28
TNIP1-220ENST00000610535 PAK3O75914 559 aaPredicted RBP23.02■■□□□ 1.27
TNIP1-220ENST00000610535 ADAMTS12P58397 1594 aa23.01■■□□□ 1.27
TNIP1-220ENST00000610535 DEKP35659 375 aaKnown RBP23.01■■□□□ 1.27
TNIP1-220ENST00000610535 NBR1Q14596 966 aa23.01■■□□□ 1.27
TNIP1-220ENST00000610535 IQGAP2Q13576 1575 aa23■■□□□ 1.27
TNIP1-220ENST00000610535 NOP58Q9Y2X3 529 aaKnown RBP23■■□□□ 1.27
TNIP1-220ENST00000610535 DAPK1P53355 1430 aa23■■□□□ 1.27
TNIP1-220ENST00000610535 SMG6Q86US8 1419 aaKnown RBP22.99■■□□□ 1.27
TNIP1-220ENST00000610535 ZNF326Q5BKZ1 582 aaKnown RBP22.98■■□□□ 1.27
TNIP1-220ENST00000610535 IFT140Q96RY7 1462 aa22.98■■□□□ 1.27
TNIP1-220ENST00000610535 ABCC5O15440 1437 aa22.98■■□□□ 1.27
TNIP1-220ENST00000610535 DHX29Q7Z478 1369 aaKnown RBP22.97■■□□□ 1.27
TNIP1-220ENST00000610535 NUDCQ9Y266 331 aa22.97■■□□□ 1.27
TNIP1-220ENST00000610535 CCDC136Q96JN2 1154 aa22.96■■□□□ 1.27
TNIP1-220ENST00000610535 ROCK1Q13464 1354 aa22.96■■□□□ 1.27
TNIP1-220ENST00000610535 MYT1LQ9UL68 1186 aa22.94■■□□□ 1.26
TNIP1-220ENST00000610535 WDR62O43379 1518 aa22.94■■□□□ 1.26
TNIP1-220ENST00000610535 RNF123Q5XPI4 1314 aa22.91■■□□□ 1.26
TNIP1-220ENST00000610535 EIF4G3O43432 1585 aaKnown RBP22.91■■□□□ 1.26
TNIP1-220ENST00000610535 POLR1AO95602 1720 aaPredicted RBP22.9■■□□□ 1.26
TNIP1-220ENST00000610535 USP47Q96K76 1375 aa22.89■■□□□ 1.25
TNIP1-220ENST00000610535 PNISRQ8TF01 805 aaKnown RBP22.87■■□□□ 1.25
TNIP1-220ENST00000610535 BCORL1Q5H9F3 1711 aa22.87■■□□□ 1.25
TNIP1-220ENST00000610535 DNMT1P26358 1616 aaKnown RBP22.86■■□□□ 1.25
TNIP1-220ENST00000610535 PZPP20742 1482 aa22.86■■□□□ 1.25
TNIP1-220ENST00000610535 GRIN2AQ12879 1464 aa22.85■■□□□ 1.25
TNIP1-220ENST00000610535 TMC1Q8TDI8 760 aa22.85■■□□□ 1.25
TNIP1-220ENST00000610535 ANP32AP39687 249 aaKnown RBP22.82■■□□□ 1.24
TNIP1-220ENST00000610535 PKD2Q13563 968 aa22.82■■□□□ 1.24
TNIP1-220ENST00000610535 IPO9Q96P70 1041 aaKnown RBP22.82■■□□□ 1.24
TNIP1-220ENST00000610535 ZNF777Q9ULD5 760 aaPredicted RBP22.82■■□□□ 1.24
TNIP1-220ENST00000610535 DISP1Q96F81 1524 aa22.81■■□□□ 1.24
TNIP1-220ENST00000610535 KIAA0586Q9BVV6 1533 aa22.8■■□□□ 1.24
TNIP1-220ENST00000610535 MBD5Q9P267 1494 aa22.79■■□□□ 1.24
TNIP1-220ENST00000610535 CFDP1Q9UEE9 299 aaPredicted RBP22.78■■□□□ 1.24
TNIP1-220ENST00000610535 JPH4Q96JJ6 628 aa22.77■■□□□ 1.24
TNIP1-220ENST00000610535 ZBTB47Q9UFB7 747 aaPredicted RBP22.77■■□□□ 1.24
TNIP1-220ENST00000610535 KIAA1107Q9UPP5 1409 aa22.77■■□□□ 1.23
TNIP1-220ENST00000610535 NUP153P49790 1475 aaKnown RBP22.76■■□□□ 1.23
TNIP1-220ENST00000610535 PLB1Q6P1J6 1458 aa22.76■■□□□ 1.23
TNIP1-220ENST00000610535 CARD11Q9BXL7 1154 aa22.74■■□□□ 1.23
TNIP1-220ENST00000610535 KIAA0556O60303 1618 aa22.74■■□□□ 1.23
TNIP1-220ENST00000610535 ARID4BQ4LE39 1312 aaPredicted RBP22.74■■□□□ 1.23
TNIP1-220ENST00000610535 PRG4Q92954 1404 aaPredicted RBP22.74■■□□□ 1.23
TNIP1-220ENST00000610535 SALL2Q9Y467 1007 aaPredicted RBP22.73■■□□□ 1.23
TNIP1-220ENST00000610535 KDM5CP41229 1560 aa22.72■■□□□ 1.23
TNIP1-220ENST00000610535 CEP170Q5SW79 1584 aa22.72■■□□□ 1.23
TNIP1-220ENST00000610535 KDM2AQ9Y2K7 1162 aa22.72■■□□□ 1.23
TNIP1-220ENST00000610535 ST20-MTHFSA0A0A6YYL1 179 aa22.71■■□□□ 1.23
TNIP1-220ENST00000610535 EXOC6Q8TAG9 804 aa22.71■■□□□ 1.23
TNIP1-220ENST00000610535 CAMSAP2Q08AD1 1489 aa22.71■■□□□ 1.23
TNIP1-220ENST00000610535 NPM2Q86SE8 214 aaKnown RBP22.69■■□□□ 1.22
TNIP1-220ENST00000610535 SYNJ2O15056 1496 aa22.68■■□□□ 1.22
TNIP1-220ENST00000610535 KIF15Q9NS87 1388 aa22.68■■□□□ 1.22
TNIP1-220ENST00000610535 KIF14Q15058 1648 aa22.68■■□□□ 1.22
TNIP1-220ENST00000610535 RRP1P56182 461 aaKnown RBP22.67■■□□□ 1.22
TNIP1-220ENST00000610535 RTL5Q5HYW3 569 aaPredicted RBP22.67■■□□□ 1.22
TNIP1-220ENST00000610535 ROCK2O75116 1388 aaKnown RBP22.67■■□□□ 1.22
TNIP1-220ENST00000610535 LRPPRCP42704 1394 aaKnown RBP22.67■■□□□ 1.22
TNIP1-220ENST00000610535 MYBBP1AQ9BQG0 1328 aaKnown RBP22.65■■□□□ 1.22
TNIP1-220ENST00000610535 MAGI1Q96QZ7 1491 aaPredicted RBP22.65■■□□□ 1.22
TNIP1-220ENST00000610535 GPATCH8Q9UKJ3 1502 aaKnown RBP22.64■■□□□ 1.21
TNIP1-220ENST00000610535 RCAN3Q9UKA8 241 aa22.64■■□□□ 1.21
TNIP1-220ENST00000610535 RAPGEF6Q8TEU7 1601 aa22.64■■□□□ 1.21
TNIP1-220ENST00000610535 TROQ12816 1431 aaPredicted RBP22.63■■□□□ 1.21
TNIP1-220ENST00000610535 BRD4O60885 1362 aaPredicted RBP22.63■■□□□ 1.21
TNIP1-220ENST00000610535 NUP155O75694 1391 aa22.63■■□□□ 1.21
TNIP1-220ENST00000610535 ANKRD30AQ9BXX3 1397 aa22.63■■□□□ 1.21
TNIP1-220ENST00000610535 ANKRD50Q9ULJ7 1429 aa22.62■■□□□ 1.21
TNIP1-220ENST00000610535 RALGAPBQ86X10 1494 aa22.62■■□□□ 1.21
TNIP1-220ENST00000610535 UHRF1BP1Q6BDS2 1440 aa22.62■■□□□ 1.21
TNIP1-220ENST00000610535 DCAF11Q8TEB1 546 aa22.62■■□□□ 1.21
TNIP1-220ENST00000610535 RALBP1Q15311 655 aa22.61■■□□□ 1.21
TNIP1-220ENST00000610535 ADGRL2O95490 1459 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms