RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 MYT1LQ9UL68 1186 aa26.12■■□□□ 1.77
HDDC2-210ENST00000609574 ZMYM4Q5VZL5 1548 aa26.11■■□□□ 1.77
HDDC2-210ENST00000609574 FMN1Q68DA7 1419 aa26.11■■□□□ 1.77
HDDC2-210ENST00000609574 YEATS2Q9ULM3 1422 aa26.11■■□□□ 1.77
HDDC2-210ENST00000609574 TTC37Q6PGP7 1564 aa26.09■■□□□ 1.77
HDDC2-210ENST00000609574 CDK13Q14004 1512 aaKnown RBP26.09■■□□□ 1.77
HDDC2-210ENST00000609574 ATP10AO60312 1499 aa26.04■■□□□ 1.76
HDDC2-210ENST00000609574 HECW1Q76N89 1606 aa26.04■■□□□ 1.76
HDDC2-210ENST00000609574 CLIP1P30622 1438 aa26■■□□□ 1.75
HDDC2-210ENST00000609574 C9orf84Q5VXU9 1444 aa26■■□□□ 1.75
HDDC2-210ENST00000609574 CERKQ8TCT0 537 aa26■■□□□ 1.75
HDDC2-210ENST00000609574 DMRT2Q9Y5R5 561 aa25.99■■□□□ 1.75
HDDC2-210ENST00000609574 ESF1Q9H501 851 aaKnown RBP25.97■■□□□ 1.75
HDDC2-210ENST00000609574 AFAP1Q8N556 730 aa25.96■■□□□ 1.75
HDDC2-210ENST00000609574 ZNF518AQ6AHZ1 1483 aa25.94■■□□□ 1.74
HDDC2-210ENST00000609574 CEBPAP49715 358 aaPredicted RBP25.94■■□□□ 1.74
HDDC2-210ENST00000609574 TROQ12816 1431 aaPredicted RBP25.93■■□□□ 1.74
HDDC2-210ENST00000609574 ARHGAP5Q13017 1502 aa25.93■■□□□ 1.74
HDDC2-210ENST00000609574 FER1L4A9Z1Z3 1794 aa25.92■■□□□ 1.74
HDDC2-210ENST00000609574 ARHGAP35Q9NRY4 1499 aa25.91■■□□□ 1.74
HDDC2-210ENST00000609574 KIF14Q15058 1648 aa25.9■■□□□ 1.74
HDDC2-210ENST00000609574 MYO5CQ9NQX4 1742 aa25.9■■□□□ 1.74
HDDC2-210ENST00000609574 ARHGEF12Q9NZN5 1544 aa25.89■■□□□ 1.74
HDDC2-210ENST00000609574 SIGLEC1Q9BZZ2 1709 aa25.86■■□□□ 1.73
HDDC2-210ENST00000609574 UHRF1BP1Q6BDS2 1440 aa25.85■■□□□ 1.73
HDDC2-210ENST00000609574 CHIC1Q5VXU3 224 aa25.82■■□□□ 1.72
HDDC2-210ENST00000609574 PREX1Q8TCU6 1659 aa25.78■■□□□ 1.72
HDDC2-210ENST00000609574 MLH3Q9UHC1 1453 aa25.77■■□□□ 1.72
HDDC2-210ENST00000609574 KDM5CP41229 1560 aa25.77■■□□□ 1.72
HDDC2-210ENST00000609574 CCDC18Q5T9S5 1454 aa25.75■■□□□ 1.71
HDDC2-210ENST00000609574 ZNF777Q9ULD5 760 aaPredicted RBP25.74■■□□□ 1.71
HDDC2-210ENST00000609574 CASKIN1Q8WXD9 1431 aa25.73■■□□□ 1.71
HDDC2-210ENST00000609574 SETD1BQ9UPS6 1966 aaKnown RBP25.73■■□□□ 1.71
HDDC2-210ENST00000609574 TRAPPC8Q9Y2L5 1435 aa25.71■■□□□ 1.71
HDDC2-210ENST00000609574 REREQ9P2R6 1566 aa25.7■■□□□ 1.71
HDDC2-210ENST00000609574 DIP2CQ9Y2E4 1556 aa25.7■■□□□ 1.71
HDDC2-210ENST00000609574 CNTLNQ9NXG0 1405 aa25.69■■□□□ 1.7
HDDC2-210ENST00000609574 AGLP35573 1532 aa25.68■■□□□ 1.7
HDDC2-210ENST00000609574 PTPRTO14522 1441 aa25.66■■□□□ 1.7
HDDC2-210ENST00000609574 SPAG9O60271 1321 aaKnown RBP25.65■■□□□ 1.7
HDDC2-210ENST00000609574 ABCC1P33527 1531 aa25.64■■□□□ 1.7
HDDC2-210ENST00000609574 CDC42BPBQ9Y5S2 1711 aa25.64■■□□□ 1.7
HDDC2-210ENST00000609574 DISP3Q9P2K9 1392 aa25.63■■□□□ 1.69
HDDC2-210ENST00000609574 PREX2Q70Z35 1606 aa25.63■■□□□ 1.69
HDDC2-210ENST00000609574 ABCA6Q8N139 1617 aa25.62■■□□□ 1.69
HDDC2-210ENST00000609574 HNRNPMP52272 730 aaKnown RBP eCLIP25.61■■□□□ 1.69
HDDC2-210ENST00000609574 CFDP1Q9UEE9 299 aaPredicted RBP25.6■■□□□ 1.69
HDDC2-210ENST00000609574 STRCQ7RTU9 1775 aa25.59■■□□□ 1.69
HDDC2-210ENST00000609574 FYCO1Q9BQS8 1478 aa25.58■■□□□ 1.69
HDDC2-210ENST00000609574 LRRIQ1Q96JM4 1722 aa25.57■■□□□ 1.68
HDDC2-210ENST00000609574 C3P01024 1663 aa25.57■■□□□ 1.68
HDDC2-210ENST00000609574 ZMYM3Q14202 1370 aa25.56■■□□□ 1.68
HDDC2-210ENST00000609574 ITSN2Q9NZM3 1697 aa25.56■■□□□ 1.68
HDDC2-210ENST00000609574 NPATQ14207 1427 aa25.54■■□□□ 1.68
HDDC2-210ENST00000609574 CCNB3Q8WWL7 1395 aa25.54■■□□□ 1.68
HDDC2-210ENST00000609574 PLEKHH2Q8IVE3 1493 aa25.53■■□□□ 1.68
HDDC2-210ENST00000609574 GGT6Q6P531 493 aa25.52■■□□□ 1.68
HDDC2-210ENST00000609574 GPATCH8Q9UKJ3 1502 aaKnown RBP25.52■■□□□ 1.68
HDDC2-210ENST00000609574 KIDINS220Q9ULH0 1771 aa25.51■■□□□ 1.67
HDDC2-210ENST00000609574 NCOA1Q15788 1441 aa25.51■■□□□ 1.67
HDDC2-210ENST00000609574 KIAA1107Q9UPP5 1409 aa25.51■■□□□ 1.67
HDDC2-210ENST00000609574 SAMD9LQ8IVG5 1584 aa25.51■■□□□ 1.67
HDDC2-210ENST00000609574 PPP6R1Q9UPN7 881 aa25.5■■□□□ 1.67
HDDC2-210ENST00000609574 MTUS2Q5JR59 1369 aa25.49■■□□□ 1.67
HDDC2-210ENST00000609574 CDC42BPAQ5VT25 1732 aa25.49■■□□□ 1.67
HDDC2-210ENST00000609574 SYCP2Q9BX26 1530 aa25.47■■□□□ 1.67
HDDC2-210ENST00000609574 NCKAP5LQ9HCH0 1330 aa25.47■■□□□ 1.67
HDDC2-210ENST00000609574 PKD2Q13563 968 aa25.47■■□□□ 1.67
HDDC2-210ENST00000609574 A2MP01023 1474 aa25.45■■□□□ 1.66
HDDC2-210ENST00000609574 IQSEC2Q5JU85 1478 aa25.45■■□□□ 1.66
HDDC2-210ENST00000609574 SOCS7O14512 581 aa25.44■■□□□ 1.66
HDDC2-210ENST00000609574 CAMSAP1Q5T5Y3 1602 aa25.44■■□□□ 1.66
HDDC2-210ENST00000609574 ATP7AQ04656 1500 aa25.42■■□□□ 1.66
HDDC2-210ENST00000609574 ILDR2Q71H61 639 aa25.42■■□□□ 1.66
HDDC2-210ENST00000609574 MROH2AA6NES4 1674 aa25.41■■□□□ 1.66
HDDC2-210ENST00000609574 UBAP1LF5GYI3 381 aa25.4■■□□□ 1.66
HDDC2-210ENST00000609574 LTBP4Q8N2S1 1624 aa25.4■■□□□ 1.66
HDDC2-210ENST00000609574 SUPT6HQ7KZ85 1726 aaKnown RBP25.4■■□□□ 1.66
HDDC2-210ENST00000609574 ZNF335Q9H4Z2 1342 aaPredicted RBP25.37■■□□□ 1.65
HDDC2-210ENST00000609574 PTPRKQ15262 1439 aa25.35■■□□□ 1.65
HDDC2-210ENST00000609574 ZNF644Q9H582 1327 aaPredicted RBP25.34■■□□□ 1.65
HDDC2-210ENST00000609574 PLA2R1Q13018 1463 aa25.33■■□□□ 1.65
HDDC2-210ENST00000609574 CLTCQ00610 1675 aaKnown RBP25.32■■□□□ 1.64
HDDC2-210ENST00000609574 RSPH4AQ5TD94 716 aa25.31■■□□□ 1.64
HDDC2-210ENST00000609574 PLXNC1O60486 1568 aa25.3■■□□□ 1.64
HDDC2-210ENST00000609574 INO80Q9ULG1 1556 aaPredicted RBP25.3■■□□□ 1.64
HDDC2-210ENST00000609574 DHX29Q7Z478 1369 aaKnown RBP25.3■■□□□ 1.64
HDDC2-210ENST00000609574 RTEL1-TNFRSF6BF6WH68 1400 aa25.29■■□□□ 1.64
HDDC2-210ENST00000609574 KIF3BO15066 747 aa25.29■■□□□ 1.64
HDDC2-210ENST00000609574 SPATA31D1Q6ZQQ2 1576 aa25.28■■□□□ 1.64
HDDC2-210ENST00000609574 CEP170BQ9Y4F5 1589 aaPredicted RBP25.27■■□□□ 1.64
HDDC2-210ENST00000609574 WASHC2CQ9Y4E1 1318 aa25.26■■□□□ 1.63
HDDC2-210ENST00000609574 ADGBQ8N7X0 1667 aa25.24■■□□□ 1.63
HDDC2-210ENST00000609574 MYO3AQ8NEV4 1616 aa25.24■■□□□ 1.63
HDDC2-210ENST00000609574 TCOF1Q13428 1488 aaKnown RBP25.24■■□□□ 1.63
HDDC2-210ENST00000609574 TSPY4P0CV99 314 aa25.24■■□□□ 1.63
HDDC2-210ENST00000609574 TSPY10P0CW01 314 aa25.24■■□□□ 1.63
HDDC2-210ENST00000609574 A2ML1A8K2U0 1454 aa25.23■■□□□ 1.63
HDDC2-210ENST00000609574 MBD5Q9P267 1494 aa25.23■■□□□ 1.63
HDDC2-210ENST00000609574 SCAF1Q9H7N4 1312 aaKnown RBP25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms