RNA–Protein interactions for RNA: ENST00000606498.5

TM2D1-212, Transcript of TM2 domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TM2D1, Length 969 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-212ENST00000606498 CDK11AQ9UQ88 783 aaPredicted RBP27.97■■■□□ 2.07
TM2D1-212ENST00000606498 SIGLEC1Q9BZZ2 1709 aa27.97■■■□□ 2.07
TM2D1-212ENST00000606498 ARHGAP5Q13017 1502 aa27.97■■■□□ 2.07
TM2D1-212ENST00000606498 POGZQ7Z3K3 1410 aa27.94■■■□□ 2.06
TM2D1-212ENST00000606498 ITSN2Q9NZM3 1697 aa27.91■■■□□ 2.06
TM2D1-212ENST00000606498 ZFYVE16Q7Z3T8 1539 aa27.9■■■□□ 2.06
TM2D1-212ENST00000606498 ABCC1P33527 1531 aa27.89■■■□□ 2.06
TM2D1-212ENST00000606498 ADAMTSL3P82987 1691 aa27.89■■■□□ 2.06
TM2D1-212ENST00000606498 BCORL1Q5H9F3 1711 aa27.89■■■□□ 2.05
TM2D1-212ENST00000606498 KDM5CP41229 1560 aa27.88■■■□□ 2.05
TM2D1-212ENST00000606498 SCAPERQ9BY12 1400 aa27.87■■■□□ 2.05
TM2D1-212ENST00000606498 YEATS2Q9ULM3 1422 aa27.85■■■□□ 2.05
TM2D1-212ENST00000606498 LOC105371045A0A1W2PR82 267 aa27.85■■■□□ 2.05
TM2D1-212ENST00000606498 EHBP1L1Q8N3D4 1523 aa27.85■■■□□ 2.05
TM2D1-212ENST00000606498 SAMD9LQ8IVG5 1584 aa27.82■■■□□ 2.04
TM2D1-212ENST00000606498 HECW2Q9P2P5 1572 aa27.82■■■□□ 2.04
TM2D1-212ENST00000606498 MAGI2Q86UL8 1455 aa27.81■■■□□ 2.04
TM2D1-212ENST00000606498 TIAM1Q13009 1591 aa27.81■■■□□ 2.04
TM2D1-212ENST00000606498 MADDQ8WXG6 1647 aa27.81■■■□□ 2.04
TM2D1-212ENST00000606498 ZNF518AQ6AHZ1 1483 aa27.8■■■□□ 2.04
TM2D1-212ENST00000606498 ARHGEF12Q9NZN5 1544 aa27.79■■■□□ 2.04
TM2D1-212ENST00000606498 EFCAB2Q5VUJ9 269 aa27.79■■■□□ 2.04
TM2D1-212ENST00000606498 ABCA6Q8N139 1617 aa27.77■■■□□ 2.04
TM2D1-212ENST00000606498 GPATCH8Q9UKJ3 1502 aaKnown RBP27.77■■■□□ 2.04
TM2D1-212ENST00000606498 VPS8Q8N3P4 1428 aa27.76■■■□□ 2.04
TM2D1-212ENST00000606498 DIP2CQ9Y2E4 1556 aa27.74■■■□□ 2.03
TM2D1-212ENST00000606498 MTUS2Q5JR59 1369 aa27.73■■■□□ 2.03
TM2D1-212ENST00000606498 SYCP2Q9BX26 1530 aa27.73■■■□□ 2.03
TM2D1-212ENST00000606498 RIMS1Q86UR5 1692 aaKnown RBP27.72■■■□□ 2.03
TM2D1-212ENST00000606498 SUPT6HQ7KZ85 1726 aaKnown RBP27.71■■■□□ 2.03
TM2D1-212ENST00000606498 KIDINS220Q9ULH0 1771 aa27.71■■■□□ 2.03
TM2D1-212ENST00000606498 TRAPPC8Q9Y2L5 1435 aa27.7■■■□□ 2.03
TM2D1-212ENST00000606498 FER1L4A9Z1Z3 1794 aa27.69■■■□□ 2.02
TM2D1-212ENST00000606498 REREQ9P2R6 1566 aa27.66■■■□□ 2.02
TM2D1-212ENST00000606498 C9orf84Q5VXU9 1444 aa27.66■■■□□ 2.02
TM2D1-212ENST00000606498 PTPRMP28827 1452 aa27.64■■■□□ 2.02
TM2D1-212ENST00000606498 INO80Q9ULG1 1556 aaPredicted RBP27.64■■■□□ 2.01
TM2D1-212ENST00000606498 ATP10AO60312 1499 aa27.64■■■□□ 2.01
TM2D1-212ENST00000606498 MLH3Q9UHC1 1453 aa27.64■■■□□ 2.01
TM2D1-212ENST00000606498 CCNB3Q8WWL7 1395 aa27.62■■■□□ 2.01
TM2D1-212ENST00000606498 AFAP1Q8N556 730 aa27.61■■■□□ 2.01
TM2D1-212ENST00000606498 NCOA2Q15596 1464 aa27.61■■■□□ 2.01
TM2D1-212ENST00000606498 ARID4BQ4LE39 1312 aaPredicted RBP27.59■■■□□ 2.01
TM2D1-212ENST00000606498 LRRC9Q6ZRR7 1453 aa27.57■■■□□ 2
TM2D1-212ENST00000606498 MAP3K1Q13233 1512 aa27.57■■■□□ 2
TM2D1-212ENST00000606498 PLEKHH2Q8IVE3 1493 aa27.56■■■□□ 2
TM2D1-212ENST00000606498 ATP7AQ04656 1500 aa27.55■■■□□ 2
TM2D1-212ENST00000606498 KIAA1107Q9UPP5 1409 aa27.54■■■□□ 2
TM2D1-212ENST00000606498 ZNF777Q9ULD5 760 aaPredicted RBP27.52■■■□□ 2
TM2D1-212ENST00000606498 CFDP1Q9UEE9 299 aaPredicted RBP27.5■■□□□ 1.99
TM2D1-212ENST00000606498 PLXNC1O60486 1568 aa27.5■■□□□ 1.99
TM2D1-212ENST00000606498 CAMSAP2Q08AD1 1489 aa27.5■■□□□ 1.99
TM2D1-212ENST00000606498 AGLP35573 1532 aa27.49■■□□□ 1.99
TM2D1-212ENST00000606498 MBD5Q9P267 1494 aa27.48■■□□□ 1.99
TM2D1-212ENST00000606498 ADGBQ8N7X0 1667 aa27.48■■□□□ 1.99
TM2D1-212ENST00000606498 ZNF644Q9H582 1327 aaPredicted RBP27.45■■□□□ 1.99
TM2D1-212ENST00000606498 HNRNPMP52272 730 aaKnown RBP eCLIP27.44■■□□□ 1.98
TM2D1-212ENST00000606498 MLECQ14165 292 aa27.41■■□□□ 1.98
TM2D1-212ENST00000606498 ARHGEF5Q12774 1597 aa27.4■■□□□ 1.98
TM2D1-212ENST00000606498 C3P01024 1663 aa27.4■■□□□ 1.98
TM2D1-212ENST00000606498 LMTK3Q96Q04 1460 aa27.39■■□□□ 1.98
TM2D1-212ENST00000606498 KANK4Q5T7N3 995 aaPredicted RBP27.39■■□□□ 1.98
TM2D1-212ENST00000606498 MYT1LQ9UL68 1186 aa27.39■■□□□ 1.98
TM2D1-212ENST00000606498 CCDC141Q6ZP82 1450 aa27.38■■□□□ 1.97
TM2D1-212ENST00000606498 SPAG9O60271 1321 aaKnown RBP27.38■■□□□ 1.97
TM2D1-212ENST00000606498 PREX1Q8TCU6 1659 aa27.34■■□□□ 1.97
TM2D1-212ENST00000606498 MROH2AA6NES4 1674 aa27.33■■□□□ 1.97
TM2D1-212ENST00000606498 A2MP01023 1474 aa27.33■■□□□ 1.97
TM2D1-212ENST00000606498 MYOM3Q5VTT5 1437 aa27.33■■□□□ 1.96
TM2D1-212ENST00000606498 CROCC2H7BZ55 1655 aa27.32■■□□□ 1.96
TM2D1-212ENST00000606498 RTEL1-TNFRSF6BF6WH68 1400 aa27.29■■□□□ 1.96
TM2D1-212ENST00000606498 CLTCQ00610 1675 aaKnown RBP27.29■■□□□ 1.96
TM2D1-212ENST00000606498 MAST1Q9Y2H9 1570 aa27.28■■□□□ 1.96
TM2D1-212ENST00000606498 PTPN23Q9H3S7 1636 aa27.26■■□□□ 1.95
TM2D1-212ENST00000606498 MIA2Q96PC5 1412 aa27.25■■□□□ 1.95
TM2D1-212ENST00000606498 PLPPR3Q6T4P5 718 aa27.23■■□□□ 1.95
TM2D1-212ENST00000606498 SETD1BQ9UPS6 1966 aaKnown RBP27.18■■□□□ 1.94
TM2D1-212ENST00000606498 CNTLNQ9NXG0 1405 aa27.18■■□□□ 1.94
TM2D1-212ENST00000606498 DNMT1P26358 1616 aaKnown RBP27.17■■□□□ 1.94
TM2D1-212ENST00000606498 CEBPAP49715 358 aaPredicted RBP27.17■■□□□ 1.94
TM2D1-212ENST00000606498 FGD6Q6ZV73 1430 aa27.16■■□□□ 1.94
TM2D1-212ENST00000606498 TCOF1Q13428 1488 aaKnown RBP27.15■■□□□ 1.94
TM2D1-212ENST00000606498 RNF17Q9BXT8 1623 aaKnown RBP27.15■■□□□ 1.94
TM2D1-212ENST00000606498 EIF2AK4Q9P2K8 1649 aaKnown RBP27.13■■□□□ 1.93
TM2D1-212ENST00000606498 DHX29Q7Z478 1369 aaKnown RBP27.12■■□□□ 1.93
TM2D1-212ENST00000606498 SHANK2Q9UPX8 1470 aa27.12■■□□□ 1.93
TM2D1-212ENST00000606498 APLP2Q06481 763 aa27.11■■□□□ 1.93
TM2D1-212ENST00000606498 MYO3AQ8NEV4 1616 aa27.1■■□□□ 1.93
TM2D1-212ENST00000606498 MROH1Q8NDA8 1641 aa27.09■■□□□ 1.93
TM2D1-212ENST00000606498 ZNF142P52746 1687 aaPredicted RBP27.09■■□□□ 1.93
TM2D1-212ENST00000606498 KDM5DQ9BY66 1539 aa27.08■■□□□ 1.93
TM2D1-212ENST00000606498 FAM135AQ9P2D6 1515 aa27.08■■□□□ 1.93
TM2D1-212ENST00000606498 HSPA2P54652 639 aa27.08■■□□□ 1.93
TM2D1-212ENST00000606498 RSPH4AQ5TD94 716 aa27.08■■□□□ 1.93
TM2D1-212ENST00000606498 STRCQ7RTU9 1775 aa27.07■■□□□ 1.92
TM2D1-212ENST00000606498 UHRF1BP1Q6BDS2 1440 aa27.07■■□□□ 1.92
TM2D1-212ENST00000606498 ABCC5O15440 1437 aa27.06■■□□□ 1.92
TM2D1-212ENST00000606498 DAPK1P53355 1430 aa27.04■■□□□ 1.92
TM2D1-212ENST00000606498 NPATQ14207 1427 aa27.04■■□□□ 1.92
TM2D1-212ENST00000606498 ZC3H13Q5T200 1668 aaKnown RBP27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms