RNA–Protein interactions for RNA: ENST00000606377.6

PAX6-231, Transcript of paired box 6, human

APPRIS P4 TSL 5 BASIC

Gene PAX6, Length 6,901 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-231	ENST00000606377	FGD1	P98174	961 aa		12.83	□□□□□ -0.36
PAX6-231	ENST00000606377	KCNJ4	P48050	445 aa		12.83	□□□□□ -0.36
PAX6-231	ENST00000606377	KANK4	Q5T7N3	995 aa	Predicted RBP	12.83	□□□□□ -0.36
PAX6-231	ENST00000606377	SMARCA2	P51531	1590 aa		12.81	□□□□□ -0.36
PAX6-231	ENST00000606377	RTF1	Q92541	710 aa	Known RBP	12.81	□□□□□ -0.36
PAX6-231	ENST00000606377	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	12.81	□□□□□ -0.36
PAX6-231	ENST00000606377	HSP90AB1	P08238	724 aa	Known RBP	12.81	□□□□□ -0.36
PAX6-231	ENST00000606377	GLIPR1L2	Q4G1C9	344 aa		12.81	□□□□□ -0.36
PAX6-231	ENST00000606377	B4GALNT3	Q6L9W6	998 aa		12.8	□□□□□ -0.36
PAX6-231	ENST00000606377	ROCK2	O75116	1388 aa	Known RBP	12.79	□□□□□ -0.36
PAX6-231	ENST00000606377	VPS8	Q8N3P4	1428 aa		12.78	□□□□□ -0.36
PAX6-231	ENST00000606377	EFCAB2	Q5VUJ9	269 aa		12.77	□□□□□ -0.36
PAX6-231	ENST00000606377	NUP155	O75694	1391 aa		12.77	□□□□□ -0.36
PAX6-231	ENST00000606377	KTN1	Q86UP2	1357 aa	Known RBP	12.77	□□□□□ -0.37
PAX6-231	ENST00000606377	MPHOSPH9	Q99550	1183 aa		12.76	□□□□□ -0.37
PAX6-231	ENST00000606377	PLCB2	Q00722	1185 aa		12.76	□□□□□ -0.37
PAX6-231	ENST00000606377	HNRNPM	P52272	730 aa	Known RBP eCLIP	12.76	□□□□□ -0.37
PAX6-231	ENST00000606377	CSB-PGBD3	P0DP91	1061 aa		12.76	□□□□□ -0.37
PAX6-231	ENST00000606377	DNTTIP2	Q5QJE6	756 aa	Known RBP	12.75	□□□□□ -0.37
PAX6-231	ENST00000606377	NUTM2D	Q5VT03	806 aa	Predicted RBP	12.75	□□□□□ -0.37
PAX6-231	ENST00000606377	FMN1	Q68DA7	1419 aa		12.74	□□□□□ -0.37
PAX6-231	ENST00000606377	TIMELESS	Q9UNS1	1208 aa		12.74	□□□□□ -0.37
PAX6-231	ENST00000606377	KIF3B	O15066	747 aa		12.74	□□□□□ -0.37
PAX6-231	ENST00000606377	APBB1	O00213	710 aa		12.74	□□□□□ -0.37
PAX6-231	ENST00000606377	ANKRD30A	Q9BXX3	1397 aa		12.74	□□□□□ -0.37
PAX6-231	ENST00000606377	ZNF330	Q9Y3S2	320 aa	Predicted RBP	12.73	□□□□□ -0.37
PAX6-231	ENST00000606377	WIZ	O95785	1651 aa		12.73	□□□□□ -0.37
PAX6-231	ENST00000606377	U2AF1L5	P0DN76	240 aa	Predicted RBP	12.73	□□□□□ -0.37
PAX6-231	ENST00000606377	U2AF1	Q01081	240 aa	Known RBP eCLIP	12.73	□□□□□ -0.37
PAX6-231	ENST00000606377	RAB3GAP2	Q9H2M9	1393 aa		12.72	□□□□□ -0.37
PAX6-231	ENST00000606377	SPRYD3	Q8NCJ5	442 aa		12.71	□□□□□ -0.37
PAX6-231	ENST00000606377	HSCB	Q8IWL3	235 aa		12.7	□□□□□ -0.38
PAX6-231	ENST00000606377	ISY1	Q9ULR0	285 aa	Known RBP	12.7	□□□□□ -0.38
PAX6-231	ENST00000606377	CCER2	I3L3R5	266 aa		12.69	□□□□□ -0.38
PAX6-231	ENST00000606377	NOP58	Q9Y2X3	529 aa	Known RBP	12.69	□□□□□ -0.38
PAX6-231	ENST00000606377	MCC	P23508	829 aa		12.69	□□□□□ -0.38
PAX6-231	ENST00000606377	FHOD3	Q2V2M9	1422 aa		12.69	□□□□□ -0.38
PAX6-231	ENST00000606377	CCDC9	Q9Y3X0	531 aa	Known RBP	12.68	□□□□□ -0.38
PAX6-231	ENST00000606377	WASHC2C	Q9Y4E1	1318 aa		12.68	□□□□□ -0.38
PAX6-231	ENST00000606377	EIF3A	Q14152	1382 aa	Known RBP	12.68	□□□□□ -0.38
PAX6-231	ENST00000606377	IPO8	O15397	1037 aa	Known RBP	12.68	□□□□□ -0.38
PAX6-231	ENST00000606377	GOLGA6L4	A6NEF3	574 aa		12.67	□□□□□ -0.38
PAX6-231	ENST00000606377	SPAG9	O60271	1321 aa	Known RBP	12.67	□□□□□ -0.38
PAX6-231	ENST00000606377	TOP2A	P11388	1531 aa	Known RBP	12.67	□□□□□ -0.38
PAX6-231	ENST00000606377	ITPRIP	Q8IWB1	547 aa		12.67	□□□□□ -0.38
PAX6-231	ENST00000606377	EID1	Q9Y6B2	187 aa		12.67	□□□□□ -0.38
PAX6-231	ENST00000606377	CALD1	Q05682	793 aa	Known RBP	12.66	□□□□□ -0.38
PAX6-231	ENST00000606377	GOLGA6L6	A8MZA4	724 aa		12.66	□□□□□ -0.38
PAX6-231	ENST00000606377	RALBP1	Q15311	655 aa		12.65	□□□□□ -0.38
PAX6-231	ENST00000606377	RAPGEF2	Q9Y4G8	1499 aa		12.65	□□□□□ -0.38
PAX6-231	ENST00000606377	NUTM2F	A1L443	756 aa		12.65	□□□□□ -0.39
PAX6-231	ENST00000606377	NGDN	Q8NEJ9	315 aa	Known RBP	12.64	□□□□□ -0.39
PAX6-231	ENST00000606377	CADPS	Q9ULU8	1353 aa		12.63	□□□□□ -0.39
PAX6-231	ENST00000606377	TERF2IP	Q9NYB0	399 aa		12.63	□□□□□ -0.39
PAX6-231	ENST00000606377	RCAN3	Q9UKA8	241 aa		12.63	□□□□□ -0.39
PAX6-231	ENST00000606377	CLSTN1	O94985	981 aa		12.63	□□□□□ -0.39
PAX6-231	ENST00000606377	CCDC146	Q8IYE0	955 aa		12.63	□□□□□ -0.39
PAX6-231	ENST00000606377	CCDC18	Q5T9S5	1454 aa		12.63	□□□□□ -0.39
PAX6-231	ENST00000606377	JPH4	Q96JJ6	628 aa		12.63	□□□□□ -0.39
PAX6-231	ENST00000606377	KIAA1211	Q6ZU35	1233 aa		12.63	□□□□□ -0.39
PAX6-231	ENST00000606377	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	12.63	□□□□□ -0.39
PAX6-231	ENST00000606377	CHMP3	Q9Y3E7	222 aa		12.62	□□□□□ -0.39
PAX6-231	ENST00000606377	GNL2	Q13823	731 aa	Known RBP	12.62	□□□□□ -0.39
PAX6-231	ENST00000606377	L3MBTL2	Q969R5	705 aa		12.61	□□□□□ -0.39
PAX6-231	ENST00000606377	LTV1	Q96GA3	475 aa	Predicted RBP	12.61	□□□□□ -0.39
PAX6-231	ENST00000606377	STK31	Q9BXU1	1019 aa		12.61	□□□□□ -0.39
PAX6-231	ENST00000606377	TRAK1	Q9UPV9	953 aa		12.6	□□□□□ -0.39
PAX6-231	ENST00000606377	CFAP44	Q96MT7	982 aa		12.6	□□□□□ -0.39
PAX6-231	ENST00000606377	NAP1L5	Q96NT1	182 aa	Predicted RBP	12.6	□□□□□ -0.39
PAX6-231	ENST00000606377	AMPH	P49418	695 aa		12.6	□□□□□ -0.39
PAX6-231	ENST00000606377	RTN4	Q9NQC3	1192 aa	Known RBP	12.6	□□□□□ -0.39
PAX6-231	ENST00000606377	RWDD1	Q9H446	243 aa	Predicted RBP	12.59	□□□□□ -0.39
PAX6-231	ENST00000606377	SMC4	Q9NTJ3	1288 aa		12.59	□□□□□ -0.39
PAX6-231	ENST00000606377	RSPH4A	Q5TD94	716 aa		12.58	□□□□□ -0.39
PAX6-231	ENST00000606377	GORAB	Q5T7V8	394 aa		12.58	□□□□□ -0.4
PAX6-231	ENST00000606377	ERICH6B	Q5W0A0	696 aa		12.58	□□□□□ -0.4
PAX6-231	ENST00000606377	SLC4A10	Q6U841	1118 aa		12.58	□□□□□ -0.4
PAX6-231	ENST00000606377	TAF7L	Q5H9L4	462 aa		12.58	□□□□□ -0.4
PAX6-231	ENST00000606377	TMX4	Q9H1E5	349 aa	Predicted RBP	12.58	□□□□□ -0.4
PAX6-231	ENST00000606377	NRDC	O43847	1150 aa		12.57	□□□□□ -0.4
PAX6-231	ENST00000606377	DRC7	Q8IY82	874 aa		12.57	□□□□□ -0.4
PAX6-231	ENST00000606377	TRIM6-TRIM34	B2RNG4	842 aa		12.55	□□□□□ -0.4
PAX6-231	ENST00000606377	CLUAP1	Q96AJ1	413 aa		12.55	□□□□□ -0.4
PAX6-231	ENST00000606377	NCBP3	Q53F19	620 aa	Known RBP	12.54	□□□□□ -0.4
PAX6-231	ENST00000606377	CYB5RL	Q6IPT4	315 aa		12.54	□□□□□ -0.4
PAX6-231	ENST00000606377	PMFBP1	Q8TBY8	1022 aa		12.54	□□□□□ -0.4
PAX6-231	ENST00000606377	GPATCH3	Q96I76	525 aa		12.54	□□□□□ -0.4
PAX6-231	ENST00000606377	FANCD2	Q9BXW9	1451 aa		12.53	□□□□□ -0.4
PAX6-231	ENST00000606377	CHMP4A	Q9BY43	222 aa		12.53	□□□□□ -0.4
PAX6-231	ENST00000606377	ATAD2B	Q9ULI0	1458 aa		12.53	□□□□□ -0.4
PAX6-231	ENST00000606377	RRP7A	Q9Y3A4	280 aa	Known RBP	12.52	□□□□□ -0.4
PAX6-231	ENST00000606377	CCDC144A	A2RUR9	1427 aa		12.52	□□□□□ -0.4
PAX6-231	ENST00000606377	MFAP1	P55081	439 aa	Known RBP	12.52	□□□□□ -0.41
PAX6-231	ENST00000606377	AEBP2	Q6ZN18	517 aa	Predicted RBP	12.52	□□□□□ -0.41
PAX6-231	ENST00000606377	SMARCA4	P51532	1647 aa		12.51	□□□□□ -0.41
PAX6-231	ENST00000606377		G3V3G9	751 aa		12.51	□□□□□ -0.41
PAX6-231	ENST00000606377	LMOD3	Q0VAK6	560 aa		12.51	□□□□□ -0.41
PAX6-231	ENST00000606377	DCAF8	Q5TAQ9	597 aa		12.51	□□□□□ -0.41
PAX6-231	ENST00000606377	HSP90B1	P14625	803 aa	Known RBP	12.51	□□□□□ -0.41
PAX6-231	ENST00000606377	CENPJ	Q9HC77	1338 aa	Predicted RBP	12.5	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms