RNA–Protein interactions for RNA: ENST00000602847.1

AC004542.2-201, humanhuman

TSL 3 BASIC

Gene AC004542.2, Length 546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.2-201ENST00000602847 NCKAP5LQ9HCH0 1330 aa8.7□□□□□ -1.02
AC004542.2-201ENST00000602847 KDM2AQ9Y2K7 1162 aa8.69□□□□□ -1.02
AC004542.2-201ENST00000602847 HAP1P54257 671 aaPredicted RBP8.68□□□□□ -1.02
AC004542.2-201ENST00000602847 CRISPLD2Q9H0B8 497 aa8.68□□□□□ -1.02
AC004542.2-201ENST00000602847 KIF3CO14782 793 aa8.67□□□□□ -1.02
AC004542.2-201ENST00000602847 CCDC180Q9P1Z9 1646 aa8.66□□□□□ -1.02
AC004542.2-201ENST00000602847 POTEMA6NI47 508 aa8.64□□□□□ -1.03
AC004542.2-201ENST00000602847 C2orf72A6NCS6 295 aa8.63□□□□□ -1.03
AC004542.2-201ENST00000602847 POTEGQ6S5H5 508 aa8.62□□□□□ -1.03
AC004542.2-201ENST00000602847 GPHNQ9NQX3 736 aaPredicted RBP8.62□□□□□ -1.03
AC004542.2-201ENST00000602847 SLC24A1O60721 1099 aa8.61□□□□□ -1.03
AC004542.2-201ENST00000602847 MFSD10Q14728 455 aa8.61□□□□□ -1.03
AC004542.2-201ENST00000602847 C3orf67Q6ZVT6 689 aa8.6□□□□□ -1.03
AC004542.2-201ENST00000602847 FAM163AQ96GL9 167 aaPredicted RBP8.6□□□□□ -1.03
AC004542.2-201ENST00000602847 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.6□□□□□ -1.03
AC004542.2-201ENST00000602847 G3V3G9 751 aa8.59□□□□□ -1.03
AC004542.2-201ENST00000602847 DSG2Q14126 1118 aa8.59□□□□□ -1.03
AC004542.2-201ENST00000602847 LARP6Q9BRS8 491 aaKnown RBP8.59□□□□□ -1.03
AC004542.2-201ENST00000602847 PLSCR2Q9NRY7 297 aa8.59□□□□□ -1.03
AC004542.2-201ENST00000602847 VSIG10Q8N0Z9 540 aa8.58□□□□□ -1.04
AC004542.2-201ENST00000602847 PDE4AP27815 886 aa8.57□□□□□ -1.04
AC004542.2-201ENST00000602847 FOXK1P85037 733 aa8.57□□□□□ -1.04
AC004542.2-201ENST00000602847 LCE2DQ5TA82 110 aaPredicted RBP8.57□□□□□ -1.04
AC004542.2-201ENST00000602847 SLAIN1Q8ND83 568 aa8.56□□□□□ -1.04
AC004542.2-201ENST00000602847 TMC2Q8TDI7 906 aa8.54□□□□□ -1.04
AC004542.2-201ENST00000602847 RB1CC1Q8TDY2 1594 aa8.53□□□□□ -1.04
AC004542.2-201ENST00000602847 HOXB3P14651 431 aaPredicted RBP8.53□□□□□ -1.04
AC004542.2-201ENST00000602847 PPP1R15BQ5SWA1 713 aa8.53□□□□□ -1.04
AC004542.2-201ENST00000602847 PLPP6Q8IY26 295 aa8.53□□□□□ -1.04
AC004542.2-201ENST00000602847 CAMK2BQ13554 666 aa8.52□□□□□ -1.05
AC004542.2-201ENST00000602847 DDX27Q96GQ7 796 aaKnown RBP8.52□□□□□ -1.05
AC004542.2-201ENST00000602847 EMILIN3Q9NT22 766 aa8.51□□□□□ -1.05
AC004542.2-201ENST00000602847 PCDH10Q9P2E7 1040 aa8.51□□□□□ -1.05
AC004542.2-201ENST00000602847 KCNV2Q8TDN2 545 aa8.47□□□□□ -1.05
AC004542.2-201ENST00000602847 SLC34A2O95436 690 aa8.45□□□□□ -1.06
AC004542.2-201ENST00000602847 E2F4Q16254 413 aa8.45□□□□□ -1.06
AC004542.2-201ENST00000602847 OXER1Q8TDS5 423 aa8.45□□□□□ -1.06
AC004542.2-201ENST00000602847 KDM4FA0A1W2PPD8 638 aa8.43□□□□□ -1.06
AC004542.2-201ENST00000602847 ST18O60284 1047 aa8.43□□□□□ -1.06
AC004542.2-201ENST00000602847 PTCD2Q8WV60 388 aaKnown RBP8.43□□□□□ -1.06
AC004542.2-201ENST00000602847 WDR70Q9NW82 654 aa8.43□□□□□ -1.06
AC004542.2-201ENST00000602847 ARIH1Q9Y4X5 557 aaPredicted RBP8.42□□□□□ -1.06
AC004542.2-201ENST00000602847 GPR153Q6NV75 609 aa8.41□□□□□ -1.06
AC004542.2-201ENST00000602847 KHSRPQ92945 711 aaKnown RBP eCLIP8.41□□□□□ -1.06
AC004542.2-201ENST00000602847 UPF1Q92900 1129 aaKnown RBP eCLIP8.4□□□□□ -1.06
AC004542.2-201ENST00000602847 DPYSL4O14531 572 aa8.39□□□□□ -1.07
AC004542.2-201ENST00000602847 SNPHO15079 494 aa8.39□□□□□ -1.07
AC004542.2-201ENST00000602847 PCDHGA4Q9Y5G9 962 aa8.39□□□□□ -1.07
AC004542.2-201ENST00000602847 CECR2Q9BXF3 1484 aa8.38□□□□□ -1.07
AC004542.2-201ENST00000602847 DOK7Q18PE1 504 aa8.37□□□□□ -1.07
AC004542.2-201ENST00000602847 ARSIQ5FYB1 569 aa8.37□□□□□ -1.07
AC004542.2-201ENST00000602847 CDAN1Q8IWY9 1227 aa8.37□□□□□ -1.07
AC004542.2-201ENST00000602847 ARHGEF1Q92888 912 aaKnown RBP8.37□□□□□ -1.07
AC004542.2-201ENST00000602847 UNC13AQ9UPW8 1703 aa8.36□□□□□ -1.07
AC004542.2-201ENST00000602847 HOXB1P14653 301 aaPredicted RBP8.35□□□□□ -1.07
AC004542.2-201ENST00000602847 ANO8Q9HCE9 1232 aaPredicted RBP8.34□□□□□ -1.07
AC004542.2-201ENST00000602847 ZSWIM6Q9HCJ5 1215 aa8.34□□□□□ -1.07
AC004542.2-201ENST00000602847 NACADO15069 1562 aa8.34□□□□□ -1.07
AC004542.2-201ENST00000602847 PDIA6Q15084 440 aa8.33□□□□□ -1.08
AC004542.2-201ENST00000602847 P3H3Q8IVL6 736 aa8.33□□□□□ -1.08
AC004542.2-201ENST00000602847 NUDT7P0C024 238 aa8.32□□□□□ -1.08
AC004542.2-201ENST00000602847 CC2D2AQ9P2K1 1620 aa8.32□□□□□ -1.08
AC004542.2-201ENST00000602847 EVI5O60447 810 aa8.31□□□□□ -1.08
AC004542.2-201ENST00000602847 MAP3K9P80192 1104 aa8.31□□□□□ -1.08
AC004542.2-201ENST00000602847 ZNF710Q8N1W2 664 aa8.31□□□□□ -1.08
AC004542.2-201ENST00000602847 POTEB3A0JP26 581 aa8.3□□□□□ -1.08
AC004542.2-201ENST00000602847 SEMA3EO15041 775 aa8.3□□□□□ -1.08
AC004542.2-201ENST00000602847 POTEBQ6S5H4 581 aa8.3□□□□□ -1.08
AC004542.2-201ENST00000602847 BICRAQ9NZM4 1560 aa8.3□□□□□ -1.08
AC004542.2-201ENST00000602847 MARVELD3Q96A59 401 aa8.29□□□□□ -1.08
AC004542.2-201ENST00000602847 SPDYE16A6NNV3 312 aaPredicted RBP8.28□□□□□ -1.08
AC004542.2-201ENST00000602847 RIMBP2O15034 1052 aa8.28□□□□□ -1.08
AC004542.2-201ENST00000602847 MLLT3P42568 568 aaPredicted RBP8.28□□□□□ -1.08
AC004542.2-201ENST00000602847 TBC1D12O60347 775 aa8.27□□□□□ -1.09
AC004542.2-201ENST00000602847 PTGER2P43116 358 aa8.27□□□□□ -1.09
AC004542.2-201ENST00000602847 PRIM1P49642 420 aaKnown RBP8.27□□□□□ -1.09
AC004542.2-201ENST00000602847 LHX6Q9UPM6 363 aa8.27□□□□□ -1.09
AC004542.2-201ENST00000602847 TESPA1A2RU30 521 aaPredicted RBP8.26□□□□□ -1.09
AC004542.2-201ENST00000602847 ZNF316A6NFI3 1004 aaPredicted RBP8.24□□□□□ -1.09
AC004542.2-201ENST00000602847 EMP3P54852 163 aa8.24□□□□□ -1.09
AC004542.2-201ENST00000602847 FOSBP53539 338 aa8.23□□□□□ -1.09
AC004542.2-201ENST00000602847 DDX12PQ92771 950 aa8.23□□□□□ -1.09
AC004542.2-201ENST00000602847 PCDHGA10Q9Y5H3 936 aa8.23□□□□□ -1.09
AC004542.2-201ENST00000602847 OSBPP22059 807 aa8.21□□□□□ -1.1
AC004542.2-201ENST00000602847 POTEEQ6S8J3 1075 aa8.21□□□□□ -1.1
AC004542.2-201ENST00000602847 JPH4Q96JJ6 628 aa8.2□□□□□ -1.1
AC004542.2-201ENST00000602847 CUX2O14529 1486 aa8.19□□□□□ -1.1
AC004542.2-201ENST00000602847 FAM205CA6NFA0 338 aa8.19□□□□□ -1.1
AC004542.2-201ENST00000602847 GRXCR2A6NFK2 248 aa8.18□□□□□ -1.1
AC004542.2-201ENST00000602847 PHF14O94880 888 aa8.18□□□□□ -1.1
AC004542.2-201ENST00000602847 VARS2Q5ST30 1063 aaKnown RBP8.18□□□□□ -1.1
AC004542.2-201ENST00000602847 HS3ST6Q96QI5 342 aa8.18□□□□□ -1.1
AC004542.2-201ENST00000602847 ZNF454Q8N9F8 522 aa8.17□□□□□ -1.1
AC004542.2-201ENST00000602847 ADAM33Q9BZ11 813 aa8.17□□□□□ -1.1
AC004542.2-201ENST00000602847 ERBB3P21860 1342 aa8.17□□□□□ -1.1
AC004542.2-201ENST00000602847 NBR1Q14596 966 aa8.16□□□□□ -1.1
AC004542.2-201ENST00000602847 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.16□□□□□ -1.1
AC004542.2-201ENST00000602847 SPNS2Q8IVW8 549 aa8.16□□□□□ -1.1
AC004542.2-201ENST00000602847 BCANQ96GW7 911 aa8.16□□□□□ -1.1
AC004542.2-201ENST00000602847 EIF4G1Q04637 1599 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms