RNA–Protein interactions for RNA: ENST00000602582.5

TRIM11-206, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 682 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-206ENST00000602582 RAPGEF3O95398 923 aa23.14■■□□□ 1.29
TRIM11-206ENST00000602582 PREX2Q70Z35 1606 aa23.14■■□□□ 1.29
TRIM11-206ENST00000602582 MAP3K1Q13233 1512 aa23.13■■□□□ 1.29
TRIM11-206ENST00000602582 DENND4BO75064 1496 aaPredicted RBP23.12■■□□□ 1.29
TRIM11-206ENST00000602582 CDC42BPAQ5VT25 1732 aa23.12■■□□□ 1.29
TRIM11-206ENST00000602582 KDM4FA0A1W2PPD8 638 aa23.11■■□□□ 1.29
TRIM11-206ENST00000602582 ARHGAP5Q13017 1502 aa23.11■■□□□ 1.29
TRIM11-206ENST00000602582 ADGRL1O94910 1474 aa23.11■■□□□ 1.29
TRIM11-206ENST00000602582 TIAM1Q13009 1591 aa23.08■■□□□ 1.29
TRIM11-206ENST00000602582 ZMYM4Q5VZL5 1548 aa23.08■■□□□ 1.28
TRIM11-206ENST00000602582 EFCAB2Q5VUJ9 269 aa23.06■■□□□ 1.28
TRIM11-206ENST00000602582 EHBP1L1Q8N3D4 1523 aa23.06■■□□□ 1.28
TRIM11-206ENST00000602582 ARHGEF40Q8TER5 1519 aa23.06■■□□□ 1.28
TRIM11-206ENST00000602582 POGZQ7Z3K3 1410 aa23.06■■□□□ 1.28
TRIM11-206ENST00000602582 KANK4Q5T7N3 995 aaPredicted RBP23.05■■□□□ 1.28
TRIM11-206ENST00000602582 SCAPERQ9BY12 1400 aa23.05■■□□□ 1.28
TRIM11-206ENST00000602582 MTUS2Q5JR59 1369 aa23.04■■□□□ 1.28
TRIM11-206ENST00000602582 ABCC1P33527 1531 aa23.02■■□□□ 1.28
TRIM11-206ENST00000602582 GPATCH8Q9UKJ3 1502 aaKnown RBP23.01■■□□□ 1.27
TRIM11-206ENST00000602582 ITSN2Q9NZM3 1697 aa22.99■■□□□ 1.27
TRIM11-206ENST00000602582 ZFYVE16Q7Z3T8 1539 aa22.98■■□□□ 1.27
TRIM11-206ENST00000602582 KDM5CP41229 1560 aa22.97■■□□□ 1.27
TRIM11-206ENST00000602582 SAMD9LQ8IVG5 1584 aa22.97■■□□□ 1.27
TRIM11-206ENST00000602582 ZNF518AQ6AHZ1 1483 aa22.97■■□□□ 1.27
TRIM11-206ENST00000602582 MAGI2Q86UL8 1455 aa22.97■■□□□ 1.27
TRIM11-206ENST00000602582 LRRC9Q6ZRR7 1453 aa22.96■■□□□ 1.27
TRIM11-206ENST00000602582 ARHGEF12Q9NZN5 1544 aa22.96■■□□□ 1.27
TRIM11-206ENST00000602582 SUPT6HQ7KZ85 1726 aaKnown RBP22.95■■□□□ 1.26
TRIM11-206ENST00000602582 YEATS2Q9ULM3 1422 aa22.95■■□□□ 1.26
TRIM11-206ENST00000602582 CCNB3Q8WWL7 1395 aa22.93■■□□□ 1.26
TRIM11-206ENST00000602582 SIGLEC1Q9BZZ2 1709 aa22.93■■□□□ 1.26
TRIM11-206ENST00000602582 RRBP1Q9P2E9 1410 aaKnown RBP22.92■■□□□ 1.26
TRIM11-206ENST00000602582 ZEB1P37275 1124 aaPredicted RBP22.92■■□□□ 1.26
TRIM11-206ENST00000602582 HECW2Q9P2P5 1572 aa22.91■■□□□ 1.26
TRIM11-206ENST00000602582 SYCP2Q9BX26 1530 aa22.9■■□□□ 1.26
TRIM11-206ENST00000602582 BCORL1Q5H9F3 1711 aa22.9■■□□□ 1.26
TRIM11-206ENST00000602582 NCOA2Q15596 1464 aa22.9■■□□□ 1.26
TRIM11-206ENST00000602582 TRAPPC8Q9Y2L5 1435 aa22.9■■□□□ 1.26
TRIM11-206ENST00000602582 ADAMTSL3P82987 1691 aa22.89■■□□□ 1.25
TRIM11-206ENST00000602582 AFAP1Q8N556 730 aa22.88■■□□□ 1.25
TRIM11-206ENST00000602582 CFDP1Q9UEE9 299 aaPredicted RBP22.86■■□□□ 1.25
TRIM11-206ENST00000602582 ZNF777Q9ULD5 760 aaPredicted RBP22.85■■□□□ 1.25
TRIM11-206ENST00000602582 ABCA6Q8N139 1617 aa22.85■■□□□ 1.25
TRIM11-206ENST00000602582 PLEKHH2Q8IVE3 1493 aa22.85■■□□□ 1.25
TRIM11-206ENST00000602582 MLH3Q9UHC1 1453 aa22.85■■□□□ 1.25
TRIM11-206ENST00000602582 DIP2CQ9Y2E4 1556 aa22.84■■□□□ 1.25
TRIM11-206ENST00000602582 KIAA1107Q9UPP5 1409 aa22.84■■□□□ 1.25
TRIM11-206ENST00000602582 ATP10AO60312 1499 aa22.83■■□□□ 1.25
TRIM11-206ENST00000602582 KIDINS220Q9ULH0 1771 aa22.83■■□□□ 1.24
TRIM11-206ENST00000602582 C9orf84Q5VXU9 1444 aa22.82■■□□□ 1.24
TRIM11-206ENST00000602582 MADDQ8WXG6 1647 aa22.81■■□□□ 1.24
TRIM11-206ENST00000602582 REREQ9P2R6 1566 aa22.8■■□□□ 1.24
TRIM11-206ENST00000602582 ARID4BQ4LE39 1312 aaPredicted RBP22.8■■□□□ 1.24
TRIM11-206ENST00000602582 HNRNPMP52272 730 aaKnown RBP eCLIP22.78■■□□□ 1.24
TRIM11-206ENST00000602582 ZNF644Q9H582 1327 aaPredicted RBP22.78■■□□□ 1.24
TRIM11-206ENST00000602582 INO80Q9ULG1 1556 aaPredicted RBP22.77■■□□□ 1.24
TRIM11-206ENST00000602582 CAMSAP2Q08AD1 1489 aa22.76■■□□□ 1.23
TRIM11-206ENST00000602582 MBD5Q9P267 1494 aa22.76■■□□□ 1.23
TRIM11-206ENST00000602582 ATP7AQ04656 1500 aa22.74■■□□□ 1.23
TRIM11-206ENST00000602582 CCER1Q8TC90 406 aaPredicted RBP22.74■■□□□ 1.23
TRIM11-206ENST00000602582 RIMS1Q86UR5 1692 aaKnown RBP22.74■■□□□ 1.23
TRIM11-206ENST00000602582 MYT1LQ9UL68 1186 aa22.73■■□□□ 1.23
TRIM11-206ENST00000602582 PTPRMP28827 1452 aa22.73■■□□□ 1.23
TRIM11-206ENST00000602582 FER1L4A9Z1Z3 1794 aa22.72■■□□□ 1.23
TRIM11-206ENST00000602582 SPAG9O60271 1321 aaKnown RBP22.71■■□□□ 1.23
TRIM11-206ENST00000602582 AGLP35573 1532 aa22.69■■□□□ 1.22
TRIM11-206ENST00000602582 MYOM3Q5VTT5 1437 aa22.69■■□□□ 1.22
TRIM11-206ENST00000602582 ARHGEF5Q12774 1597 aa22.67■■□□□ 1.22
TRIM11-206ENST00000602582 CCDC141Q6ZP82 1450 aa22.67■■□□□ 1.22
TRIM11-206ENST00000602582 PLXNC1O60486 1568 aa22.66■■□□□ 1.22
TRIM11-206ENST00000602582 MIA2Q96PC5 1412 aa22.65■■□□□ 1.22
TRIM11-206ENST00000602582 MLECQ14165 292 aa22.65■■□□□ 1.22
TRIM11-206ENST00000602582 ADGBQ8N7X0 1667 aa22.65■■□□□ 1.22
TRIM11-206ENST00000602582 RTEL1-TNFRSF6BF6WH68 1400 aa22.62■■□□□ 1.21
TRIM11-206ENST00000602582 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.62■■□□□ 1.213e-6■□□□□ 10.3
TRIM11-206ENST00000602582 A2MP01023 1474 aa22.6■■□□□ 1.21
TRIM11-206ENST00000602582 PTPN23Q9H3S7 1636 aa22.59■■□□□ 1.21
TRIM11-206ENST00000602582 FGD6Q6ZV73 1430 aa22.58■■□□□ 1.21
TRIM11-206ENST00000602582 RSPH4AQ5TD94 716 aa22.58■■□□□ 1.21
TRIM11-206ENST00000602582 MAST1Q9Y2H9 1570 aa22.56■■□□□ 1.2
TRIM11-206ENST00000602582 CROCC2H7BZ55 1655 aa22.54■■□□□ 1.2
TRIM11-206ENST00000602582 TCOF1Q13428 1488 aaKnown RBP22.53■■□□□ 1.2
TRIM11-206ENST00000602582 FAM50AQ14320 339 aaKnown RBP22.51■■□□□ 1.19
TRIM11-206ENST00000602582 C3P01024 1663 aa22.51■■□□□ 1.19
TRIM11-206ENST00000602582 DNMT1P26358 1616 aaKnown RBP22.49■■□□□ 1.19
TRIM11-206ENST00000602582 DHX29Q7Z478 1369 aaKnown RBP22.49■■□□□ 1.19
TRIM11-206ENST00000602582 TSPY4P0CV99 314 aa22.48■■□□□ 1.19
TRIM11-206ENST00000602582 TSPY10P0CW01 314 aa22.48■■□□□ 1.19
TRIM11-206ENST00000602582 ITGAEP38570 1179 aa22.48■■□□□ 1.19
TRIM11-206ENST00000602582 MROH2AA6NES4 1674 aa22.48■■□□□ 1.19
TRIM11-206ENST00000602582 LMTK3Q96Q04 1460 aa22.47■■□□□ 1.19
TRIM11-206ENST00000602582 PLPPR3Q6T4P5 718 aa22.47■■□□□ 1.19
TRIM11-206ENST00000602582 ABCC5O15440 1437 aa22.47■■□□□ 1.19
TRIM11-206ENST00000602582 SHANK2Q9UPX8 1470 aa22.47■■□□□ 1.19
TRIM11-206ENST00000602582 CNTLNQ9NXG0 1405 aa22.46■■□□□ 1.19
TRIM11-206ENST00000602582 CLTCQ00610 1675 aaKnown RBP22.46■■□□□ 1.19
TRIM11-206ENST00000602582 DAPK1P53355 1430 aa22.44■■□□□ 1.18
TRIM11-206ENST00000602582 DHX57Q6P158 1386 aaKnown RBP22.44■■□□□ 1.18
TRIM11-206ENST00000602582 CEBPAP49715 358 aaPredicted RBP22.43■■□□□ 1.18
TRIM11-206ENST00000602582 ILDR1Q86SU0 546 aaPredicted RBP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms