RNA–Protein interactions for RNA: ENST00000601071.1

BRD4-209, Transcript of bromodomain containing 4, humanhuman

TSL 5

Gene BRD4, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4-209ENST00000601071 HOXB1P14653 301 aaPredicted RBP8.73□□□□□ -1.01
BRD4-209ENST00000601071 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.73□□□□□ -1.014e-10■■□□□ 12.7
BRD4-209ENST00000601071 BAZ1AQ9NRL2 1556 aaPredicted RBP8.73□□□□□ -1.01
BRD4-209ENST00000601071 ZNF467Q7Z7K2 595 aaPredicted RBP8.72□□□□□ -1.01
BRD4-209ENST00000601071 ILDR1Q86SU0 546 aaPredicted RBP8.72□□□□□ -1.01
BRD4-209ENST00000601071 SMARCA4P51532 1647 aa8.72□□□□□ -1.01
BRD4-209ENST00000601071 BAZ1BQ9UIG0 1483 aaKnown RBP8.7□□□□□ -1.02
BRD4-209ENST00000601071 LAMC3Q9Y6N6 1575 aa8.7□□□□□ -1.02
BRD4-209ENST00000601071 MYT1LQ9UL68 1186 aa8.7□□□□□ -1.02
BRD4-209ENST00000601071 ERBB3P21860 1342 aa8.68□□□□□ -1.02
BRD4-209ENST00000601071 FAM9AQ8IZU1 332 aaPredicted RBP8.67□□□□□ -1.02
BRD4-209ENST00000601071 ZNF710Q8N1W2 664 aa8.67□□□□□ -1.02
BRD4-209ENST00000601071 PDS5BQ9NTI5 1447 aa8.66□□□□□ -1.02
BRD4-209ENST00000601071 DOK7Q18PE1 504 aa8.66□□□□□ -1.02
BRD4-209ENST00000601071 PTGER2P43116 358 aa8.65□□□□□ -1.02
BRD4-209ENST00000601071 BOLA1Q9Y3E2 137 aa8.63□□□□□ -1.03
BRD4-209ENST00000601071 G3V3G9 751 aa8.62□□□□□ -1.03
BRD4-209ENST00000601071 CHRM1P11229 460 aaPredicted RBP8.62□□□□□ -1.03
BRD4-209ENST00000601071 PSEN1P49768 467 aa8.62□□□□□ -1.03
BRD4-209ENST00000601071 WIZO95785 1651 aa8.62□□□□□ -1.03
BRD4-209ENST00000601071 TOP2AP11388 1531 aaKnown RBP8.61□□□□□ -1.03
BRD4-209ENST00000601071 RIMBP2O15034 1052 aa8.61□□□□□ -1.03
BRD4-209ENST00000601071 FKBP8Q14318 412 aa8.61□□□□□ -1.03
BRD4-209ENST00000601071 GSE1Q14687 1217 aa8.61□□□□□ -1.03
BRD4-209ENST00000601071 MRC2Q9UBG0 1479 aa8.6□□□□□ -1.03
BRD4-209ENST00000601071 VARS2Q5ST30 1063 aaKnown RBP8.6□□□□□ -1.03
BRD4-209ENST00000601071 DPY19L2Q6NUT2 758 aa8.6□□□□□ -1.03
BRD4-209ENST00000601071 ZNF687Q8N1G0 1237 aa8.6□□□□□ -1.03
BRD4-209ENST00000601071 EEA1Q15075 1411 aa8.6□□□□□ -1.03
BRD4-209ENST00000601071 CCDC88BA6NC98 1476 aa8.58□□□□□ -1.04
BRD4-209ENST00000601071 ZSWIM6Q9HCJ5 1215 aa8.58□□□□□ -1.04
BRD4-209ENST00000601071 PPARGC1BQ86YN6 1023 aaKnown RBP8.57□□□□□ -1.04
BRD4-209ENST00000601071 WDR62O43379 1518 aa8.57□□□□□ -1.04
BRD4-209ENST00000601071 PEG3Q9GZU2 1588 aa8.56□□□□□ -1.04
BRD4-209ENST00000601071 PDAP1Q13442 181 aaKnown RBP8.55□□□□□ -1.04
BRD4-209ENST00000601071 RIMBP3CA6NJZ7 1639 aa8.54□□□□□ -1.04
BRD4-209ENST00000601071 RIMBP3BA6NNM3 1639 aa8.54□□□□□ -1.04
BRD4-209ENST00000601071 RIMBP3Q9UFD9 1639 aa8.54□□□□□ -1.04
BRD4-209ENST00000601071 CEP164Q9UPV0 1460 aa8.53□□□□□ -1.04
BRD4-209ENST00000601071 TNIKQ9UKE5 1360 aa8.53□□□□□ -1.04
BRD4-209ENST00000601071 CADPSQ9ULU8 1353 aa8.53□□□□□ -1.04
BRD4-209ENST00000601071 WRNQ14191 1432 aaPredicted RBP eCLIP8.52□□□□□ -1.05
BRD4-209ENST00000601071 CABP2Q9NPB3 220 aa8.5□□□□□ -1.05
BRD4-209ENST00000601071 GPR153Q6NV75 609 aa8.49□□□□□ -1.05
BRD4-209ENST00000601071 FANCD2Q9BXW9 1451 aa8.48□□□□□ -1.05
BRD4-209ENST00000601071 FBXO3Q9UK99 471 aa8.47□□□□□ -1.05
BRD4-209ENST00000601071 UBTFP17480 764 aaKnown RBP8.46□□□□□ -1.06
BRD4-209ENST00000601071 ANKRD13DQ6ZTN6 518 aa8.45□□□□□ -1.06
BRD4-209ENST00000601071 ARHGEF11O15085 1522 aa8.44□□□□□ -1.06
BRD4-209ENST00000601071 CCER1Q8TC90 406 aaPredicted RBP8.43□□□□□ -1.06
BRD4-209ENST00000601071 PLA2G2EQ9NZK7 142 aa8.43□□□□□ -1.06
BRD4-209ENST00000601071 SOGA1O94964 1423 aa8.43□□□□□ -1.06
BRD4-209ENST00000601071 CEP162Q5TB80 1403 aa8.43□□□□□ -1.06
BRD4-209ENST00000601071 LSM11P83369 360 aaKnown RBP eCLIP8.42□□□□□ -1.06
BRD4-209ENST00000601071 CYB5RLQ6IPT4 315 aa8.42□□□□□ -1.06
BRD4-209ENST00000601071 KLHL34Q8N239 644 aa8.42□□□□□ -1.06
BRD4-209ENST00000601071 GOLGA3Q08378 1498 aa8.42□□□□□ -1.06
BRD4-209ENST00000601071 URB2Q14146 1524 aaKnown RBP8.41□□□□□ -1.06
BRD4-209ENST00000601071 TMEM92Q6UXU6 159 aa8.41□□□□□ -1.06
BRD4-209ENST00000601071 ABCC8Q09428 1581 aa8.4□□□□□ -1.06
BRD4-209ENST00000601071 PRDM2Q13029 1718 aa8.4□□□□□ -1.07
BRD4-209ENST00000601071 MICALL2Q8IY33 904 aa8.39□□□□□ -1.07
BRD4-209ENST00000601071 CHD1O14646 1710 aa8.38□□□□□ -1.07
BRD4-209ENST00000601071 ZNF316A6NFI3 1004 aaPredicted RBP8.38□□□□□ -1.07
BRD4-209ENST00000601071 HCSTQ9UBK5 93 aa8.38□□□□□ -1.07
BRD4-209ENST00000601071 ZNF608Q9ULD9 1512 aaPredicted RBP8.36□□□□□ -1.07
BRD4-209ENST00000601071 PBX2P40425 430 aa8.36□□□□□ -1.07
BRD4-209ENST00000601071 ARSIQ5FYB1 569 aa8.36□□□□□ -1.07
BRD4-209ENST00000601071 CFTRP13569 1480 aa8.36□□□□□ -1.07
BRD4-209ENST00000601071 VASPP50552 380 aaPredicted RBP8.35□□□□□ -1.07
BRD4-209ENST00000601071 IFT140Q96RY7 1462 aa8.34□□□□□ -1.07
BRD4-209ENST00000601071 EIF4G3O43432 1585 aaKnown RBP8.34□□□□□ -1.07
BRD4-209ENST00000601071 ARAP1Q96P48 1450 aa8.33□□□□□ -1.08
BRD4-209ENST00000601071 EFCAB3Q8N7B9 438 aa8.33□□□□□ -1.08
BRD4-209ENST00000601071 RUSC2Q8N2Y8 1516 aa8.33□□□□□ -1.08
BRD4-209ENST00000601071 CLIP1P30622 1438 aa8.32□□□□□ -1.08
BRD4-209ENST00000601071 KIF21BO75037 1637 aa8.31□□□□□ -1.08
BRD4-209ENST00000601071 TOPBP1Q92547 1522 aa8.29□□□□□ -1.08
BRD4-209ENST00000601071 VPS8Q8N3P4 1428 aa8.29□□□□□ -1.08
BRD4-209ENST00000601071 SOX12O15370 315 aa8.27□□□□□ -1.09
BRD4-209ENST00000601071 KHSRPQ92945 711 aaKnown RBP eCLIP8.27□□□□□ -1.09
BRD4-209ENST00000601071 DIEXFQ68CQ4 756 aaKnown RBP8.26□□□□□ -1.09
BRD4-209ENST00000601071 SYNJ1O43426 1573 aa8.26□□□□□ -1.09
BRD4-209ENST00000601071 CLSPNQ9HAW4 1339 aa8.26□□□□□ -1.09
BRD4-209ENST00000601071 AQRO60306 1485 aaKnown RBP eCLIP8.26□□□□□ -1.096e-10■■□□□ 12
BRD4-209ENST00000601071 POTEEQ6S8J3 1075 aa8.25□□□□□ -1.09
BRD4-209ENST00000601071 CIZ1Q9ULV3 898 aaPredicted RBP8.25□□□□□ -1.09
BRD4-209ENST00000601071 KIF27Q86VH2 1401 aa8.25□□□□□ -1.09
BRD4-209ENST00000601071 TOP2BQ02880 1626 aa8.25□□□□□ -1.09
BRD4-209ENST00000601071 DNMBPQ6XZF7 1577 aa8.24□□□□□ -1.09
BRD4-209ENST00000601071 RGS20O76081 388 aa8.24□□□□□ -1.09
BRD4-209ENST00000601071 CENPBP07199 599 aaPredicted RBP8.24□□□□□ -1.09
BRD4-209ENST00000601071 SPOCK2Q92563 424 aa8.24□□□□□ -1.09
BRD4-209ENST00000601071 MS4A4AQ96JQ5 239 aa8.24□□□□□ -1.09
BRD4-209ENST00000601071 PRXQ9BXM0 1461 aa8.24□□□□□ -1.09
BRD4-209ENST00000601071 ERICH3Q5RHP9 1530 aa8.23□□□□□ -1.09
BRD4-209ENST00000601071 RAPGEF2Q9Y4G8 1499 aa8.22□□□□□ -1.09
BRD4-209ENST00000601071 TTBK1Q5TCY1 1321 aaPredicted RBP8.22□□□□□ -1.09
BRD4-209ENST00000601071 TARBP1Q13395 1621 aaKnown RBP8.21□□□□□ -1.09
BRD4-209ENST00000601071 ADGRD1Q6QNK2 874 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms