RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 ADGRL1O94910 1474 aa25.18■■□□□ 1.62
RPS28-203ENST00000600659 DENND4BO75064 1496 aaPredicted RBP25.17■■□□□ 1.62
RPS28-203ENST00000600659 ZMYM4Q5VZL5 1548 aa25.16■■□□□ 1.62
RPS28-203ENST00000600659 MTUS2Q5JR59 1369 aa25.14■■□□□ 1.62
RPS28-203ENST00000600659 GPATCH8Q9UKJ3 1502 aaKnown RBP25.14■■□□□ 1.62
RPS28-203ENST00000600659 POGZQ7Z3K3 1410 aa25.13■■□□□ 1.61
RPS28-203ENST00000600659 ABCC1P33527 1531 aa25.12■■□□□ 1.61
RPS28-203ENST00000600659 EFCAB2Q5VUJ9 269 aa25.12■■□□□ 1.61
RPS28-203ENST00000600659 SCAPERQ9BY12 1400 aa25.11■■□□□ 1.61
RPS28-203ENST00000600659 MAP3K1Q13233 1512 aa25.11■■□□□ 1.61
RPS28-203ENST00000600659 ARHGEF40Q8TER5 1519 aa25.11■■□□□ 1.61
RPS28-203ENST00000600659 ITSN2Q9NZM3 1697 aa25.1■■□□□ 1.61
RPS28-203ENST00000600659 SAMD9LQ8IVG5 1584 aa25.09■■□□□ 1.61
RPS28-203ENST00000600659 ARHGEF12Q9NZN5 1544 aa25.08■■□□□ 1.61
RPS28-203ENST00000600659 KDM5CP41229 1560 aa25.08■■□□□ 1.6
RPS28-203ENST00000600659 SUPT6HQ7KZ85 1726 aaKnown RBP25.07■■□□□ 1.6
RPS28-203ENST00000600659 KDM4FA0A1W2PPD8 638 aa25.07■■□□□ 1.6
RPS28-203ENST00000600659 LRRC9Q6ZRR7 1453 aa25.06■■□□□ 1.6
RPS28-203ENST00000600659 SIGLEC1Q9BZZ2 1709 aa25.04■■□□□ 1.6
RPS28-203ENST00000600659 NCOA2Q15596 1464 aa25.04■■□□□ 1.6
RPS28-203ENST00000600659 YEATS2Q9ULM3 1422 aa25.03■■□□□ 1.6
RPS28-203ENST00000600659 ZFYVE16Q7Z3T8 1539 aa25.01■■□□□ 1.59
RPS28-203ENST00000600659 ZNF518AQ6AHZ1 1483 aa25.01■■□□□ 1.59
RPS28-203ENST00000600659 MAGI2Q86UL8 1455 aa25.01■■□□□ 1.59
RPS28-203ENST00000600659 CCNB3Q8WWL7 1395 aa25■■□□□ 1.59
RPS28-203ENST00000600659 TRAPPC8Q9Y2L5 1435 aa24.99■■□□□ 1.59
RPS28-203ENST00000600659 SYCP2Q9BX26 1530 aa24.99■■□□□ 1.59
RPS28-203ENST00000600659 KANK4Q5T7N3 995 aaPredicted RBP24.98■■□□□ 1.59
RPS28-203ENST00000600659 HECW2Q9P2P5 1572 aa24.97■■□□□ 1.59
RPS28-203ENST00000600659 AFAP1Q8N556 730 aa24.93■■□□□ 1.58
RPS28-203ENST00000600659 KIAA1107Q9UPP5 1409 aa24.93■■□□□ 1.58
RPS28-203ENST00000600659 KIDINS220Q9ULH0 1771 aa24.92■■□□□ 1.58
RPS28-203ENST00000600659 ABCA6Q8N139 1617 aa24.92■■□□□ 1.58
RPS28-203ENST00000600659 BCORL1Q5H9F3 1711 aa24.92■■□□□ 1.58
RPS28-203ENST00000600659 MLH3Q9UHC1 1453 aa24.92■■□□□ 1.58
RPS28-203ENST00000600659 DIP2CQ9Y2E4 1556 aa24.92■■□□□ 1.58
RPS28-203ENST00000600659 ADAMTSL3P82987 1691 aa24.92■■□□□ 1.58
RPS28-203ENST00000600659 CFDP1Q9UEE9 299 aaPredicted RBP24.91■■□□□ 1.58
RPS28-203ENST00000600659 PLEKHH2Q8IVE3 1493 aa24.9■■□□□ 1.58
RPS28-203ENST00000600659 MBD5Q9P267 1494 aa24.89■■□□□ 1.57
RPS28-203ENST00000600659 ZNF777Q9ULD5 760 aaPredicted RBP24.88■■□□□ 1.57
RPS28-203ENST00000600659 ZNF644Q9H582 1327 aaPredicted RBP24.87■■□□□ 1.57
RPS28-203ENST00000600659 REREQ9P2R6 1566 aa24.86■■□□□ 1.57
RPS28-203ENST00000600659 INO80Q9ULG1 1556 aaPredicted RBP24.86■■□□□ 1.57
RPS28-203ENST00000600659 ATP10AO60312 1499 aa24.85■■□□□ 1.57
RPS28-203ENST00000600659 CAMSAP2Q08AD1 1489 aa24.85■■□□□ 1.57
RPS28-203ENST00000600659 C9orf84Q5VXU9 1444 aa24.85■■□□□ 1.57
RPS28-203ENST00000600659 AEBP2Q6ZN18 517 aaPredicted RBP24.85■■□□□ 1.57
RPS28-203ENST00000600659 HNRNPMP52272 730 aaKnown RBP eCLIP24.84■■□□□ 1.57
RPS28-203ENST00000600659 MADDQ8WXG6 1647 aa24.82■■□□□ 1.56
RPS28-203ENST00000600659 MYOM3Q5VTT5 1437 aa24.8■■□□□ 1.56
RPS28-203ENST00000600659 ATP7AQ04656 1500 aa24.8■■□□□ 1.56
RPS28-203ENST00000600659 ARHGEF5Q12774 1597 aa24.77■■□□□ 1.56
RPS28-203ENST00000600659 MIA2Q96PC5 1412 aa24.75■■□□□ 1.55
RPS28-203ENST00000600659 PLXNC1O60486 1568 aa24.74■■□□□ 1.55
RPS28-203ENST00000600659 APLP2Q06481 763 aa24.74■■□□□ 1.55
RPS28-203ENST00000600659 AGLP35573 1532 aa24.74■■□□□ 1.55
RPS28-203ENST00000600659 CCDC141Q6ZP82 1450 aa24.74■■□□□ 1.55
RPS28-203ENST00000600659 ARID4BQ4LE39 1312 aaPredicted RBP24.73■■□□□ 1.55
RPS28-203ENST00000600659 RIMS1Q86UR5 1692 aaKnown RBP24.73■■□□□ 1.55
RPS28-203ENST00000600659 SPAG9O60271 1321 aaKnown RBP24.72■■□□□ 1.55
RPS28-203ENST00000600659 FER1L4A9Z1Z3 1794 aa24.72■■□□□ 1.55
RPS28-203ENST00000600659 ADGBQ8N7X0 1667 aa24.71■■□□□ 1.55
RPS28-203ENST00000600659 PTPRMP28827 1452 aa24.71■■□□□ 1.55
RPS28-203ENST00000600659 PTPN23Q9H3S7 1636 aa24.7■■□□□ 1.54
RPS28-203ENST00000600659 RTEL1-TNFRSF6BF6WH68 1400 aa24.68■■□□□ 1.54
RPS28-203ENST00000600659 MYT1LQ9UL68 1186 aa24.66■■□□□ 1.54
RPS28-203ENST00000600659 TCOF1Q13428 1488 aaKnown RBP24.66■■□□□ 1.54
RPS28-203ENST00000600659 MAST1Q9Y2H9 1570 aa24.66■■□□□ 1.54
RPS28-203ENST00000600659 FGD6Q6ZV73 1430 aa24.66■■□□□ 1.54
RPS28-203ENST00000600659 CROCC2H7BZ55 1655 aa24.65■■□□□ 1.54
RPS28-203ENST00000600659 A2MP01023 1474 aa24.64■■□□□ 1.53
RPS28-203ENST00000600659 MLECQ14165 292 aa24.61■■□□□ 1.53
RPS28-203ENST00000600659 RSPH4AQ5TD94 716 aa24.61■■□□□ 1.53
RPS28-203ENST00000600659 DNMT1P26358 1616 aaKnown RBP24.59■■□□□ 1.53
RPS28-203ENST00000600659 ABCC5O15440 1437 aa24.56■■□□□ 1.52
RPS28-203ENST00000600659 SHANK2Q9UPX8 1470 aa24.55■■□□□ 1.52
RPS28-203ENST00000600659 DAPK1P53355 1430 aa24.53■■□□□ 1.52
RPS28-203ENST00000600659 DHX29Q7Z478 1369 aaKnown RBP24.53■■□□□ 1.52
RPS28-203ENST00000600659 C3P01024 1663 aa24.52■■□□□ 1.52
RPS28-203ENST00000600659 MROH2AA6NES4 1674 aa24.49■■□□□ 1.51
RPS28-203ENST00000600659 TSPY4P0CV99 314 aa24.48■■□□□ 1.51
RPS28-203ENST00000600659 TSPY10P0CW01 314 aa24.48■■□□□ 1.51
RPS28-203ENST00000600659 CLTCQ00610 1675 aaKnown RBP24.46■■□□□ 1.51
RPS28-203ENST00000600659 EIF2AK4Q9P2K8 1649 aaKnown RBP24.45■■□□□ 1.51
RPS28-203ENST00000600659 RNF17Q9BXT8 1623 aaKnown RBP24.45■■□□□ 1.5
RPS28-203ENST00000600659 PPARGC1BQ86YN6 1023 aaKnown RBP24.44■■□□□ 1.5
RPS28-203ENST00000600659 LMTK3Q96Q04 1460 aa24.44■■□□□ 1.5
RPS28-203ENST00000600659 CNTLNQ9NXG0 1405 aa24.43■■□□□ 1.5
RPS28-203ENST00000600659 MROH1Q8NDA8 1641 aa24.42■■□□□ 1.5
RPS28-203ENST00000600659 DUOX2Q9NRD8 1548 aa24.41■■□□□ 1.5
RPS28-203ENST00000600659 ADGRL2O95490 1459 aa24.4■■□□□ 1.5
RPS28-203ENST00000600659 CEBPAP49715 358 aaPredicted RBP24.4■■□□□ 1.5
RPS28-203ENST00000600659 PREX1Q8TCU6 1659 aa24.39■■□□□ 1.5
RPS28-203ENST00000600659 PTPRKQ15262 1439 aa24.38■■□□□ 1.49
RPS28-203ENST00000600659 KIF15Q9NS87 1388 aa24.38■■□□□ 1.49
RPS28-203ENST00000600659 FAM135AQ9P2D6 1515 aa24.38■■□□□ 1.49
RPS28-203ENST00000600659 SETD1BQ9UPS6 1966 aaKnown RBP24.38■■□□□ 1.49
RPS28-203ENST00000600659 GGT6Q6P531 493 aa24.37■■□□□ 1.49
RPS28-203ENST00000600659 KIF3BO15066 747 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms