RNA–Protein interactions for RNA: ENST00000600297.1

SLC27A1-209, Transcript of solute carrier family 27 member 1, humanhuman

TSL 2

Gene SLC27A1, Length 1,163 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1-209ENST00000600297 BCORL1Q5H9F3 1711 aa36.86■■■■□ 3.49
SLC27A1-209ENST00000600297 ADAMTSL3P82987 1691 aa36.86■■■■□ 3.49
SLC27A1-209ENST00000600297 ARHGAP5Q13017 1502 aa36.83■■■■□ 3.49
SLC27A1-209ENST00000600297 ZFYVE16Q7Z3T8 1539 aa36.83■■■■□ 3.49
SLC27A1-209ENST00000600297 SCAPERQ9BY12 1400 aa36.83■■■■□ 3.49
SLC27A1-209ENST00000600297 ARID4BQ4LE39 1312 aaPredicted RBP36.82■■■■□ 3.48
SLC27A1-209ENST00000600297 EFCAB2Q5VUJ9 269 aa36.81■■■■□ 3.48
SLC27A1-209ENST00000600297 CDC42BPBQ9Y5S2 1711 aa36.8■■■■□ 3.48
SLC27A1-209ENST00000600297 POGZQ7Z3K3 1410 aa36.8■■■■□ 3.48
SLC27A1-209ENST00000600297 MTUS2Q5JR59 1369 aa36.78■■■■□ 3.48
SLC27A1-209ENST00000600297 HECW2Q9P2P5 1572 aa36.77■■■■□ 3.48
SLC27A1-209ENST00000600297 PREX2Q70Z35 1606 aa36.76■■■■□ 3.48
SLC27A1-209ENST00000600297 MAGI2Q86UL8 1455 aa36.75■■■■□ 3.47
SLC27A1-209ENST00000600297 MADDQ8WXG6 1647 aa36.74■■■■□ 3.47
SLC27A1-209ENST00000600297 YEATS2Q9ULM3 1422 aa36.72■■■■□ 3.47
SLC27A1-209ENST00000600297 EHBP1L1Q8N3D4 1523 aa36.71■■■■□ 3.47
SLC27A1-209ENST00000600297 CDC42BPAQ5VT25 1732 aa36.71■■■■□ 3.47
SLC27A1-209ENST00000600297 TIAM1Q13009 1591 aa36.68■■■■□ 3.46
SLC27A1-209ENST00000600297 PTPRMP28827 1452 aa36.68■■■■□ 3.46
SLC27A1-209ENST00000600297 SIGLEC1Q9BZZ2 1709 aa36.68■■■■□ 3.46
SLC27A1-209ENST00000600297 RIMS1Q86UR5 1692 aaKnown RBP36.67■■■■□ 3.46
SLC27A1-209ENST00000600297 ZNF518AQ6AHZ1 1483 aa36.65■■■■□ 3.46
SLC27A1-209ENST00000600297 MAP3K1Q13233 1512 aa36.64■■■■□ 3.46
SLC27A1-209ENST00000600297 ITSN2Q9NZM3 1697 aa36.61■■■■□ 3.45
SLC27A1-209ENST00000600297 KDM5CP41229 1560 aa36.6■■■■□ 3.45
SLC27A1-209ENST00000600297 GPATCH8Q9UKJ3 1502 aaKnown RBP36.59■■■■□ 3.45
SLC27A1-209ENST00000600297 ABCC1P33527 1531 aa36.58■■■■□ 3.45
SLC27A1-209ENST00000600297 FER1L4A9Z1Z3 1794 aa36.57■■■■□ 3.44
SLC27A1-209ENST00000600297 CCNB3Q8WWL7 1395 aa36.56■■■■□ 3.44
SLC27A1-209ENST00000600297 ATP10AO60312 1499 aa36.56■■■■□ 3.44
SLC27A1-209ENST00000600297 SUPT6HQ7KZ85 1726 aaKnown RBP36.54■■■■□ 3.44
SLC27A1-209ENST00000600297 C9orf84Q5VXU9 1444 aa36.54■■■■□ 3.44
SLC27A1-209ENST00000600297 MYT1LQ9UL68 1186 aa36.53■■■■□ 3.44
SLC27A1-209ENST00000600297 LRRC9Q6ZRR7 1453 aa36.53■■■■□ 3.44
SLC27A1-209ENST00000600297 AFAP1Q8N556 730 aa36.51■■■■□ 3.44
SLC27A1-209ENST00000600297 APLP2Q06481 763 aa36.49■■■■□ 3.43
SLC27A1-209ENST00000600297 CFDP1Q9UEE9 299 aaPredicted RBP36.48■■■■□ 3.43
SLC27A1-209ENST00000600297 DIP2CQ9Y2E4 1556 aa36.48■■■■□ 3.43
SLC27A1-209ENST00000600297 MLECQ14165 292 aa36.47■■■■□ 3.43
SLC27A1-209ENST00000600297 ARHGEF12Q9NZN5 1544 aa36.46■■■■□ 3.43
SLC27A1-209ENST00000600297 NCOA2Q15596 1464 aa36.46■■■■□ 3.43
SLC27A1-209ENST00000600297 ABCA6Q8N139 1617 aa36.45■■■■□ 3.43
SLC27A1-209ENST00000600297 SAMD9LQ8IVG5 1584 aa36.44■■■■□ 3.42
SLC27A1-209ENST00000600297 TRAPPC8Q9Y2L5 1435 aa36.43■■■■□ 3.42
SLC27A1-209ENST00000600297 ZNF777Q9ULD5 760 aaPredicted RBP36.42■■■■□ 3.42
SLC27A1-209ENST00000600297 MLH3Q9UHC1 1453 aa36.42■■■■□ 3.42
SLC27A1-209ENST00000600297 PLEKHH2Q8IVE3 1493 aa36.41■■■■□ 3.42
SLC27A1-209ENST00000600297 KANK4Q5T7N3 995 aaPredicted RBP36.39■■■■□ 3.42
SLC27A1-209ENST00000600297 SYCP2Q9BX26 1530 aa36.39■■■■□ 3.42
SLC27A1-209ENST00000600297 KIDINS220Q9ULH0 1771 aa36.38■■■■□ 3.41
SLC27A1-209ENST00000600297 REREQ9P2R6 1566 aa36.38■■■■□ 3.41
SLC27A1-209ENST00000600297 KIAA1107Q9UPP5 1409 aa36.37■■■■□ 3.41
SLC27A1-209ENST00000600297 PLPPR3Q6T4P5 718 aa36.37■■■■□ 3.41
SLC27A1-209ENST00000600297 LMTK3Q96Q04 1460 aa36.28■■■■□ 3.4
SLC27A1-209ENST00000600297 HNRNPMP52272 730 aaKnown RBP eCLIP36.26■■■■□ 3.4
SLC27A1-209ENST00000600297 AGLP35573 1532 aa36.24■■■■□ 3.39
SLC27A1-209ENST00000600297 ZNF644Q9H582 1327 aaPredicted RBP36.21■■■■□ 3.39
SLC27A1-209ENST00000600297 ATP7AQ04656 1500 aa36.2■■■■□ 3.39
SLC27A1-209ENST00000600297 SPAG9O60271 1321 aaKnown RBP36.2■■■■□ 3.39
SLC27A1-209ENST00000600297 INO80Q9ULG1 1556 aaPredicted RBP36.19■■■■□ 3.38
SLC27A1-209ENST00000600297 MYOM3Q5VTT5 1437 aa36.18■■■■□ 3.38
SLC27A1-209ENST00000600297 MBD5Q9P267 1494 aa36.18■■■■□ 3.38
SLC27A1-209ENST00000600297 MIA2Q96PC5 1412 aa36.17■■■■□ 3.38
SLC27A1-209ENST00000600297 PREX1Q8TCU6 1659 aa36.17■■■■□ 3.38
SLC27A1-209ENST00000600297 CAMSAP2Q08AD1 1489 aa36.17■■■■□ 3.38
SLC27A1-209ENST00000600297 RSPH4AQ5TD94 716 aa36.16■■■■□ 3.38
SLC27A1-209ENST00000600297 C3P01024 1663 aa36.12■■■■□ 3.37
SLC27A1-209ENST00000600297 ESF1Q9H501 851 aaKnown RBP36.11■■■■□ 3.37
SLC27A1-209ENST00000600297 SETD1BQ9UPS6 1966 aaKnown RBP36.1■■■■□ 3.37
SLC27A1-209ENST00000600297 ADGBQ8N7X0 1667 aa36.1■■■■□ 3.37
SLC27A1-209ENST00000600297 CEBPAP49715 358 aaPredicted RBP36.09■■■■□ 3.37
SLC27A1-209ENST00000600297 ARHGEF5Q12774 1597 aa36.07■■■■□ 3.37
SLC27A1-209ENST00000600297 CCDC141Q6ZP82 1450 aa36.06■■■■□ 3.36
SLC27A1-209ENST00000600297 HSPA2P54652 639 aa36.06■■■■□ 3.36
SLC27A1-209ENST00000600297 RTEL1-TNFRSF6BF6WH68 1400 aa36.05■■■■□ 3.36
SLC27A1-209ENST00000600297 PLXNC1O60486 1568 aa36.03■■■■□ 3.36
SLC27A1-209ENST00000600297 A2MP01023 1474 aa36.02■■■■□ 3.36
SLC27A1-209ENST00000600297 MROH2AA6NES4 1674 aa36■■■■□ 3.35
SLC27A1-209ENST00000600297 CNTLNQ9NXG0 1405 aa36■■■■□ 3.35
SLC27A1-209ENST00000600297 ILDR1Q86SU0 546 aaPredicted RBP35.98■■■■□ 3.35
SLC27A1-209ENST00000600297 PTPN23Q9H3S7 1636 aa35.95■■■■□ 3.35
SLC27A1-209ENST00000600297 FGD6Q6ZV73 1430 aa35.95■■■■□ 3.35
SLC27A1-209ENST00000600297 TSPY4P0CV99 314 aa35.95■■■■□ 3.35
SLC27A1-209ENST00000600297 TSPY10P0CW01 314 aa35.95■■■■□ 3.35
SLC27A1-209ENST00000600297 CLTCQ00610 1675 aaKnown RBP35.94■■■■□ 3.34
SLC27A1-209ENST00000600297 UHRF1BP1Q6BDS2 1440 aa35.94■■■■□ 3.34
SLC27A1-209ENST00000600297 TCOF1Q13428 1488 aaKnown RBP35.89■■■■□ 3.34
SLC27A1-209ENST00000600297 MAST1Q9Y2H9 1570 aa35.88■■■■□ 3.33
SLC27A1-209ENST00000600297 GGT6Q6P531 493 aa35.82■■■■□ 3.32
SLC27A1-209ENST00000600297 DHX29Q7Z478 1369 aaKnown RBP35.81■■■■□ 3.32
SLC27A1-209ENST00000600297 STRCQ7RTU9 1775 aa35.8■■■■□ 3.32
SLC27A1-209ENST00000600297 ZMYM3Q14202 1370 aa35.78■■■■□ 3.32
SLC27A1-209ENST00000600297 DNMT1P26358 1616 aaKnown RBP35.78■■■■□ 3.32
SLC27A1-209ENST00000600297 SHANK2Q9UPX8 1470 aa35.77■■■■□ 3.32
SLC27A1-209ENST00000600297 CROCC2H7BZ55 1655 aa35.77■■■■□ 3.32
SLC27A1-209ENST00000600297 ABCC5O15440 1437 aa35.76■■■■□ 3.32
SLC27A1-209ENST00000600297 NPATQ14207 1427 aa35.76■■■■□ 3.32
SLC27A1-209ENST00000600297 DAPK1P53355 1430 aa35.74■■■■□ 3.31
SLC27A1-209ENST00000600297 PPP6R1Q9UPN7 881 aa35.7■■■■□ 3.31
SLC27A1-209ENST00000600297 MYO3AQ8NEV4 1616 aa35.69■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms