RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 CFDP1Q9UEE9 299 aaPredicted RBP31.06■■■□□ 2.56
GRAMD1A-212ENST00000600231 GPATCH8Q9UKJ3 1502 aaKnown RBP31.05■■■□□ 2.56
GRAMD1A-212ENST00000600231 ROCK1Q13464 1354 aa31.04■■■□□ 2.56
GRAMD1A-212ENST00000600231 ADCY10Q96PN6 1610 aa31.03■■■□□ 2.56
GRAMD1A-212ENST00000600231 ATP10BO94823 1461 aa31.03■■■□□ 2.56
GRAMD1A-212ENST00000600231 DENND4BO75064 1496 aaPredicted RBP31.03■■■□□ 2.56
GRAMD1A-212ENST00000600231 CHD1O14646 1710 aa31.02■■■□□ 2.56
GRAMD1A-212ENST00000600231 PLEKHD1A6NEE1 506 aa31.01■■■□□ 2.56
GRAMD1A-212ENST00000600231 ITSN2Q9NZM3 1697 aa31■■■□□ 2.55
GRAMD1A-212ENST00000600231 CAMSAP2Q08AD1 1489 aa30.99■■■□□ 2.55
GRAMD1A-212ENST00000600231 PTPRGP23470 1445 aa30.98■■■□□ 2.55
GRAMD1A-212ENST00000600231 MPHOSPH9Q99550 1183 aa30.97■■■□□ 2.55
GRAMD1A-212ENST00000600231 ZNF777Q9ULD5 760 aaPredicted RBP30.97■■■□□ 2.55
GRAMD1A-212ENST00000600231 HIRIP3Q9BW71 556 aaPredicted RBP30.88■■■□□ 2.53
GRAMD1A-212ENST00000600231 ABCC10Q5T3U5 1492 aa30.88■■■□□ 2.53
GRAMD1A-212ENST00000600231 KDM5BQ9UGL1 1544 aa30.86■■■□□ 2.53
GRAMD1A-212ENST00000600231 FOXD1Q16676 465 aa30.86■■■□□ 2.53
GRAMD1A-212ENST00000600231 CDC42BPAQ5VT25 1732 aa30.85■■■□□ 2.53
GRAMD1A-212ENST00000600231 NCOA1Q15788 1441 aa30.85■■■□□ 2.53
GRAMD1A-212ENST00000600231 GTF3C3Q9Y5Q9 886 aa30.84■■■□□ 2.53
GRAMD1A-212ENST00000600231 SHROOM2Q13796 1616 aa30.84■■■□□ 2.53
GRAMD1A-212ENST00000600231 DDX10Q13206 875 aaKnown RBP30.82■■■□□ 2.52
GRAMD1A-212ENST00000600231 ADGBQ8N7X0 1667 aa30.78■■■□□ 2.52
GRAMD1A-212ENST00000600231 CROCC2H7BZ55 1655 aa30.77■■■□□ 2.52
GRAMD1A-212ENST00000600231 ADGRL2O95490 1459 aa30.77■■■□□ 2.52
GRAMD1A-212ENST00000600231 SLC4A1APQ9BWU0 796 aaKnown RBP30.77■■■□□ 2.52
GRAMD1A-212ENST00000600231 ERCC6L2Q5T890 1561 aa30.75■■■□□ 2.51
GRAMD1A-212ENST00000600231 ANKRD30BQ9BXX2 1392 aa30.75■■■□□ 2.51
GRAMD1A-212ENST00000600231 ANKRD30AQ9BXX3 1397 aa30.73■■■□□ 2.51
GRAMD1A-212ENST00000600231 L3MBTL2Q969R5 705 aa30.69■■■□□ 2.5
GRAMD1A-212ENST00000600231 PZPP20742 1482 aa30.68■■■□□ 2.5
GRAMD1A-212ENST00000600231 HNRNPMP52272 730 aaKnown RBP eCLIP30.65■■■□□ 2.5
GRAMD1A-212ENST00000600231 C9orf84Q5VXU9 1444 aa30.65■■■□□ 2.5
GRAMD1A-212ENST00000600231 RPRD2Q5VT52 1461 aaKnown RBP30.65■■■□□ 2.5
GRAMD1A-212ENST00000600231 ANKRD50Q9ULJ7 1429 aa30.65■■■□□ 2.5
GRAMD1A-212ENST00000600231 SHANK2Q9UPX8 1470 aa30.64■■■□□ 2.5
GRAMD1A-212ENST00000600231 TSPY4P0CV99 314 aa30.63■■■□□ 2.49
GRAMD1A-212ENST00000600231 TSPY10P0CW01 314 aa30.63■■■□□ 2.49
GRAMD1A-212ENST00000600231 ABCC2Q92887 1545 aa30.62■■■□□ 2.49
GRAMD1A-212ENST00000600231 CDC42BPBQ9Y5S2 1711 aa30.6■■■□□ 2.49
GRAMD1A-212ENST00000600231 CLASP1Q7Z460 1538 aa30.59■■■□□ 2.49
GRAMD1A-212ENST00000600231 MBD5Q9P267 1494 aa30.59■■■□□ 2.49
GRAMD1A-212ENST00000600231 KCNH8Q96L42 1107 aa30.59■■■□□ 2.49
GRAMD1A-212ENST00000600231 PREX2Q70Z35 1606 aa30.57■■■□□ 2.48
GRAMD1A-212ENST00000600231 ARHGEF5Q12774 1597 aa30.56■■■□□ 2.48
GRAMD1A-212ENST00000600231 SAMD9LQ8IVG5 1584 aa30.56■■■□□ 2.48
GRAMD1A-212ENST00000600231 TEX14Q8IWB6 1497 aa30.55■■■□□ 2.48
GRAMD1A-212ENST00000600231 HSPA5P11021 654 aaKnown RBP30.53■■■□□ 2.48
GRAMD1A-212ENST00000600231 PKD2Q13563 968 aa30.53■■■□□ 2.48
GRAMD1A-212ENST00000600231 KIAA1107Q9UPP5 1409 aa30.53■■■□□ 2.48
GRAMD1A-212ENST00000600231 TTC37Q6PGP7 1564 aa30.52■■■□□ 2.48
GRAMD1A-212ENST00000600231 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.52■■■□□ 2.481e-10■■■■□ 24.8
GRAMD1A-212ENST00000600231 KIF15Q9NS87 1388 aa30.51■■■□□ 2.47
GRAMD1A-212ENST00000600231 CCDC141Q6ZP82 1450 aa30.5■■■□□ 2.47
GRAMD1A-212ENST00000600231 NBPF8Q3BBV2 869 aa30.49■■■□□ 2.47
GRAMD1A-212ENST00000600231 NUP155O75694 1391 aa30.49■■■□□ 2.47
GRAMD1A-212ENST00000600231 EIF4G2P78344 907 aaKnown RBP eCLIP30.48■■■□□ 2.471e-6■■■■■ 33.8
GRAMD1A-212ENST00000600231 RSPH4AQ5TD94 716 aa30.47■■■□□ 2.47
GRAMD1A-212ENST00000600231 ARHGAP5Q13017 1502 aa30.46■■■□□ 2.47
GRAMD1A-212ENST00000600231 ANP32CO43423 234 aa30.44■■■□□ 2.46
GRAMD1A-212ENST00000600231 SYCP2Q9BX26 1530 aa30.43■■■□□ 2.46
GRAMD1A-212ENST00000600231 UHRF1BP1LA0JNW5 1464 aa30.41■■■□□ 2.46
GRAMD1A-212ENST00000600231 ZCCHC11Q5TAX3 1644 aaKnown RBP30.4■■■□□ 2.46
GRAMD1A-212ENST00000600231 WASHC2AQ641Q2 1341 aa30.4■■■□□ 2.46
GRAMD1A-212ENST00000600231 MYO5CQ9NQX4 1742 aa30.39■■■□□ 2.46
GRAMD1A-212ENST00000600231 KDM5DQ9BY66 1539 aa30.38■■■□□ 2.45
GRAMD1A-212ENST00000600231 CCER2I3L3R5 266 aa30.35■■■□□ 2.45
GRAMD1A-212ENST00000600231 PLCH2O75038 1416 aa30.31■■■□□ 2.44
GRAMD1A-212ENST00000600231 PLEKHH2Q8IVE3 1493 aa30.31■■■□□ 2.44
GRAMD1A-212ENST00000600231 MAST1Q9Y2H9 1570 aa30.3■■■□□ 2.44
GRAMD1A-212ENST00000600231 C11orf95C9JLR9 678 aaPredicted RBP30.29■■■□□ 2.44
GRAMD1A-212ENST00000600231 ARHGEF12Q9NZN5 1544 aa30.28■■■□□ 2.44
GRAMD1A-212ENST00000600231 SPATA31E1Q6ZUB1 1445 aa30.27■■■□□ 2.44
GRAMD1A-212ENST00000600231 EFCAB2Q5VUJ9 269 aa30.26■■■□□ 2.43
GRAMD1A-212ENST00000600231 ZNF326Q5BKZ1 582 aaKnown RBP30.24■■■□□ 2.43
GRAMD1A-212ENST00000600231 FAM135AQ9P2D6 1515 aa30.24■■■□□ 2.43
GRAMD1A-212ENST00000600231 CCDC7Q96M83 1385 aa30.21■■■□□ 2.43
GRAMD1A-212ENST00000600231 PLXNC1O60486 1568 aa30.19■■■□□ 2.42
GRAMD1A-212ENST00000600231 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.17■■■□□ 2.424e-8■■■□□ 15.2
GRAMD1A-212ENST00000600231 CNTLNQ9NXG0 1405 aa30.15■■■□□ 2.42
GRAMD1A-212ENST00000600231 ABCC1P33527 1531 aa30.14■■■□□ 2.42
GRAMD1A-212ENST00000600231 UNC13BO14795 1591 aa30.14■■■□□ 2.42
GRAMD1A-212ENST00000600231 TRAPPC8Q9Y2L5 1435 aa30.13■■■□□ 2.41
GRAMD1A-212ENST00000600231 UHRF1BP1Q6BDS2 1440 aa30.13■■■□□ 2.41
GRAMD1A-212ENST00000600231 KIF7Q2M1P5 1343 aa30.12■■■□□ 2.41
GRAMD1A-212ENST00000600231 DUOX2Q9NRD8 1548 aa30.12■■■□□ 2.41
GRAMD1A-212ENST00000600231 WDR7Q9Y4E6 1490 aa30.1■■■□□ 2.41
GRAMD1A-212ENST00000600231 USP47Q96K76 1375 aa30.1■■■□□ 2.41
GRAMD1A-212ENST00000600231 KDM2AQ9Y2K7 1162 aa30.1■■■□□ 2.41
GRAMD1A-212ENST00000600231 DCAF11Q8TEB1 546 aa30.07■■■□□ 2.41
GRAMD1A-212ENST00000600231 ARAP3Q8WWN8 1544 aa30.06■■■□□ 2.4
GRAMD1A-212ENST00000600231 ERBINQ96RT1 1412 aa30.06■■■□□ 2.4
GRAMD1A-212ENST00000600231 POLR1AO95602 1720 aaPredicted RBP30.05■■■□□ 2.4
GRAMD1A-212ENST00000600231 AFAP1Q8N556 730 aa30.05■■■□□ 2.4
GRAMD1A-212ENST00000600231 RALGAPBQ86X10 1494 aa30.05■■■□□ 2.4
GRAMD1A-212ENST00000600231 CCDC144AA2RUR9 1427 aa30.04■■■□□ 2.4
GRAMD1A-212ENST00000600231 IQGAP3Q86VI3 1631 aa30.04■■■□□ 2.4
GRAMD1A-212ENST00000600231 PLA2R1Q13018 1463 aa30.04■■■□□ 2.4
GRAMD1A-212ENST00000600231 KDM5CP41229 1560 aa30.02■■■□□ 2.4
GRAMD1A-212ENST00000600231 SPAG9O60271 1321 aaKnown RBP30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms