RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-208ENST00000598594 SLC39A7Q92504 469 aa8.05□□□□□ -1.12
PAF1-208ENST00000598594 GZF1Q9H116 711 aaPredicted RBP8.05□□□□□ -1.12
PAF1-208ENST00000598594 TRIM41Q8WV44 630 aa8.04□□□□□ -1.12
PAF1-208ENST00000598594 USP35Q9P2H5 1018 aa8.04□□□□□ -1.12
PAF1-208ENST00000598594 METRNQ9UJH8 293 aa8.04□□□□□ -1.12
PAF1-208ENST00000598594 C7P10643 843 aa8.03□□□□□ -1.12
PAF1-208ENST00000598594 PLSCR2Q9NRY7 297 aa8.03□□□□□ -1.12
PAF1-208ENST00000598594 ATMINO43313 823 aaPredicted RBP8.02□□□□□ -1.13
PAF1-208ENST00000598594 DHX37Q8IY37 1157 aaKnown RBP8.02□□□□□ -1.13
PAF1-208ENST00000598594 MAMSTRQ6ZN01 415 aa8.01□□□□□ -1.13
PAF1-208ENST00000598594 RNF25Q96BH1 459 aaPredicted RBP8.01□□□□□ -1.13
PAF1-208ENST00000598594 POLR3GLQ9BT43 218 aa8.01□□□□□ -1.13
PAF1-208ENST00000598594 CCDC61Q9Y6R9 512 aa8□□□□□ -1.13
PAF1-208ENST00000598594 FLIIQ13045 1269 aa7.99□□□□□ -1.13
PAF1-208ENST00000598594 KDM4CQ9H3R0 1056 aa7.99□□□□□ -1.13
PAF1-208ENST00000598594 TRAK2O60296 914 aa7.98□□□□□ -1.13
PAF1-208ENST00000598594 UBE2Q2Q8WVN8 375 aa7.98□□□□□ -1.13
PAF1-208ENST00000598594 TSPYL2Q9H2G4 693 aaPredicted RBP7.98□□□□□ -1.13
PAF1-208ENST00000598594 POTEMA6NI47 508 aa7.97□□□□□ -1.13
PAF1-208ENST00000598594 MIER1Q8N108 512 aa7.97□□□□□ -1.13
PAF1-208ENST00000598594 AK7Q96M32 723 aa7.97□□□□□ -1.13
PAF1-208ENST00000598594 BARGINQ6ZT62 677 aa7.96□□□□□ -1.14
PAF1-208ENST00000598594 STK25O00506 426 aa7.95□□□□□ -1.14
PAF1-208ENST00000598594 POTEGQ6S5H5 508 aa7.95□□□□□ -1.14
PAF1-208ENST00000598594 KIF12Q96FN5 646 aa7.95□□□□□ -1.14
PAF1-208ENST00000598594 TESPA1A2RU30 521 aaPredicted RBP7.94□□□□□ -1.14
PAF1-208ENST00000598594 A6NJR5 290 aa7.94□□□□□ -1.14
PAF1-208ENST00000598594 SEMA3EO15041 775 aa7.94□□□□□ -1.14
PAF1-208ENST00000598594 RSPH4AQ5TD94 716 aa7.94□□□□□ -1.14
PAF1-208ENST00000598594 FAM177A1Q8N128 213 aaPredicted RBP7.94□□□□□ -1.14
PAF1-208ENST00000598594 CLUAP1Q96AJ1 413 aa7.94□□□□□ -1.14
PAF1-208ENST00000598594 SCUBE2Q9NQ36 999 aa7.94□□□□□ -1.14
PAF1-208ENST00000598594 RYDENQ9NUL5 291 aaKnown RBP7.94□□□□□ -1.14
PAF1-208ENST00000598594 PCDH10Q9P2E7 1040 aa7.94□□□□□ -1.14
PAF1-208ENST00000598594 ATN1P54259 1190 aaPredicted RBP7.93□□□□□ -1.14
PAF1-208ENST00000598594 FAM9AQ8IZU1 332 aaPredicted RBP7.93□□□□□ -1.14
PAF1-208ENST00000598594 TIE1P35590 1138 aa7.92□□□□□ -1.14
PAF1-208ENST00000598594 ARHGEF1Q92888 912 aaKnown RBP7.92□□□□□ -1.14
PAF1-208ENST00000598594 FBXW7Q969H0 707 aa7.92□□□□□ -1.14
PAF1-208ENST00000598594 RIOK3O14730 519 aaKnown RBP7.91□□□□□ -1.14
PAF1-208ENST00000598594 CADPS2Q86UW7 1296 aa7.91□□□□□ -1.14
PAF1-208ENST00000598594 BMP2KQ9NSY1 1161 aaPredicted RBP7.91□□□□□ -1.14
PAF1-208ENST00000598594 ZNF316A6NFI3 1004 aaPredicted RBP7.9□□□□□ -1.14
PAF1-208ENST00000598594 POTEJP0CG39 1038 aa7.9□□□□□ -1.14
PAF1-208ENST00000598594 RETREG2Q8NC44 543 aa7.89□□□□□ -1.15
PAF1-208ENST00000598594 IRF5Q13568 498 aa7.88□□□□□ -1.15
PAF1-208ENST00000598594 ZNF777Q9ULD5 760 aaPredicted RBP7.88□□□□□ -1.15
PAF1-208ENST00000598594 MAP3K13O43283 966 aa7.87□□□□□ -1.15
PAF1-208ENST00000598594 RASEFQ8IZ41 740 aa7.87□□□□□ -1.15
PAF1-208ENST00000598594 KRI1Q8N9T8 703 aaKnown RBP7.87□□□□□ -1.15
PAF1-208ENST00000598594 CCDC97Q96F63 343 aaPredicted RBP7.87□□□□□ -1.15
PAF1-208ENST00000598594 SGIP1Q9BQI5 828 aa7.87□□□□□ -1.15
PAF1-208ENST00000598594 ZBTB47Q9UFB7 747 aaPredicted RBP7.87□□□□□ -1.15
PAF1-208ENST00000598594 SERPINA10Q9UK55 444 aa7.87□□□□□ -1.15
PAF1-208ENST00000598594 PDE4DQ08499 809 aa7.86□□□□□ -1.15
PAF1-208ENST00000598594 PPM1GO15355 546 aaPredicted RBP7.85□□□□□ -1.15
PAF1-208ENST00000598594 ONECUT3O60422 494 aaPredicted RBP7.85□□□□□ -1.15
PAF1-208ENST00000598594 FAM117AQ9C073 453 aa7.85□□□□□ -1.15
PAF1-208ENST00000598594 IER5LQ5T953 404 aa7.84□□□□□ -1.15
PAF1-208ENST00000598594 SMYD5Q6GMV2 418 aa7.84□□□□□ -1.15
PAF1-208ENST00000598594 TRPC6Q9Y210 931 aa7.84□□□□□ -1.15
PAF1-208ENST00000598594 POTEFA5A3E0 1075 aa7.83□□□□□ -1.16
PAF1-208ENST00000598594 TTLL13PA6NNM8 815 aa7.83□□□□□ -1.16
PAF1-208ENST00000598594 TRIM66O15016 1216 aa7.83□□□□□ -1.16
PAF1-208ENST00000598594 STK24Q9Y6E0 443 aa7.83□□□□□ -1.16
PAF1-208ENST00000598594 VGFO15240 615 aaPredicted RBP7.82□□□□□ -1.16
PAF1-208ENST00000598594 TAF7LQ5H9L4 462 aa7.82□□□□□ -1.16
PAF1-208ENST00000598594 LCE2DQ5TA82 110 aaPredicted RBP7.82□□□□□ -1.16
PAF1-208ENST00000598594 SEC24BO95487 1268 aa7.81□□□□□ -1.16
PAF1-208ENST00000598594 GSE1Q14687 1217 aa7.81□□□□□ -1.16
PAF1-208ENST00000598594 PDE4CQ08493 712 aa7.8□□□□□ -1.16
PAF1-208ENST00000598594 BCL11BQ9C0K0 894 aaPredicted RBP7.8□□□□□ -1.16
PAF1-208ENST00000598594 AMOTL2Q9Y2J4 779 aa7.8□□□□□ -1.16
PAF1-208ENST00000598594 PCDHB13Q9Y5F0 798 aa7.8□□□□□ -1.16
PAF1-208ENST00000598594 E2F4Q16254 413 aa7.79□□□□□ -1.16
PAF1-208ENST00000598594 CCDC125Q86Z20 511 aa7.79□□□□□ -1.16
PAF1-208ENST00000598594 TRIM35Q9UPQ4 493 aa7.79□□□□□ -1.16
PAF1-208ENST00000598594 PLEKHG3A1L390 1219 aa7.78□□□□□ -1.16
PAF1-208ENST00000598594 FAM212AQ96EL1 285 aa7.78□□□□□ -1.16
PAF1-208ENST00000598594 FAM163AQ96GL9 167 aaPredicted RBP7.78□□□□□ -1.16
PAF1-208ENST00000598594 CWC22Q9HCG8 908 aaKnown RBP7.78□□□□□ -1.16
PAF1-208ENST00000598594 MYT1LQ9UL68 1186 aa7.78□□□□□ -1.16
PAF1-208ENST00000598594 NUBP1P53384 320 aa7.77□□□□□ -1.17
PAF1-208ENST00000598594 PROSER2Q86WR7 435 aaPredicted RBP7.77□□□□□ -1.17
PAF1-208ENST00000598594 COLQQ9Y215 455 aaPredicted RBP7.77□□□□□ -1.17
PAF1-208ENST00000598594 PATL2C9JE40 543 aaKnown RBP7.75□□□□□ -1.17
PAF1-208ENST00000598594 DDRGK1Q96HY6 314 aa7.75□□□□□ -1.17
PAF1-208ENST00000598594 ARID4BQ4LE39 1312 aaPredicted RBP7.75□□□□□ -1.17
PAF1-208ENST00000598594 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.74□□□□□ -1.17
PAF1-208ENST00000598594 ZFP91Q96JP5 570 aaPredicted RBP7.74□□□□□ -1.17
PAF1-208ENST00000598594 IFNL1Q8IU54 200 aa7.73□□□□□ -1.17
PAF1-208ENST00000598594 GPIHBP1Q8IV16 184 aa7.73□□□□□ -1.17
PAF1-208ENST00000598594 CERS3Q8IU89 383 aa7.72□□□□□ -1.17
PAF1-208ENST00000598594 FNBP4Q8N3X1 1017 aaPredicted RBP7.72□□□□□ -1.17
PAF1-208ENST00000598594 PLCG2P16885 1265 aa7.71□□□□□ -1.18
PAF1-208ENST00000598594 MCM6Q14566 821 aa7.71□□□□□ -1.18
PAF1-208ENST00000598594 RBM26Q5T8P6 1007 aaKnown RBP7.71□□□□□ -1.18
PAF1-208ENST00000598594 TMEM106CQ9BVX2 250 aa7.71□□□□□ -1.18
PAF1-208ENST00000598594 CCDC27Q2M243 656 aa7.7□□□□□ -1.18
PAF1-208ENST00000598594 CANXP27824 592 aaKnown RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms