RNA–Protein interactions for RNA: ENST00000596756.5

IRF3-212, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-212ENST00000596756 CDK11AQ9UQ88 783 aaPredicted RBP22.35■■□□□ 1.17
IRF3-212ENST00000596756 RIMS1Q86UR5 1692 aaKnown RBP22.35■■□□□ 1.17
IRF3-212ENST00000596756 ZFYVE16Q7Z3T8 1539 aa22.34■■□□□ 1.17
IRF3-212ENST00000596756 TROQ12816 1431 aaPredicted RBP22.33■■□□□ 1.17
IRF3-212ENST00000596756 POGZQ7Z3K3 1410 aa22.33■■□□□ 1.17
IRF3-212ENST00000596756 SCAPERQ9BY12 1400 aa22.33■■□□□ 1.17
IRF3-212ENST00000596756 KIF14Q15058 1648 aa22.32■■□□□ 1.16
IRF3-212ENST00000596756 EFCAB2Q5VUJ9 269 aa22.29■■□□□ 1.16
IRF3-212ENST00000596756 LRRIQ1Q96JM4 1722 aa22.28■■□□□ 1.16
IRF3-212ENST00000596756 MYO5CQ9NQX4 1742 aa22.28■■□□□ 1.16
IRF3-212ENST00000596756 CLIP1P30622 1438 aa22.27■■□□□ 1.16
IRF3-212ENST00000596756 CASKIN1Q8WXD9 1431 aa22.26■■□□□ 1.15
IRF3-212ENST00000596756 ATP10AO60312 1499 aa22.25■■□□□ 1.15
IRF3-212ENST00000596756 HSPA2P54652 639 aa22.23■■□□□ 1.15
IRF3-212ENST00000596756 CCDC18Q5T9S5 1454 aa22.22■■□□□ 1.15
IRF3-212ENST00000596756 ARHGAP5Q13017 1502 aa22.22■■□□□ 1.15
IRF3-212ENST00000596756 ARHGEF12Q9NZN5 1544 aa22.22■■□□□ 1.15
IRF3-212ENST00000596756 MLECQ14165 292 aa22.21■■□□□ 1.15
IRF3-212ENST00000596756 C9orf84Q5VXU9 1444 aa22.2■■□□□ 1.14
IRF3-212ENST00000596756 ZNF518AQ6AHZ1 1483 aa22.2■■□□□ 1.14
IRF3-212ENST00000596756 FER1L4A9Z1Z3 1794 aa22.2■■□□□ 1.14
IRF3-212ENST00000596756 KDM5CP41229 1560 aa22.18■■□□□ 1.14
IRF3-212ENST00000596756 AFAP1Q8N556 730 aa22.17■■□□□ 1.14
IRF3-212ENST00000596756 FYCO1Q9BQS8 1478 aa22.16■■□□□ 1.14
IRF3-212ENST00000596756 PLPPR3Q6T4P5 718 aa22.16■■□□□ 1.14
IRF3-212ENST00000596756 CDC42BPBQ9Y5S2 1711 aa22.14■■□□□ 1.14
IRF3-212ENST00000596756 PREX2Q70Z35 1606 aa22.13■■□□□ 1.13
IRF3-212ENST00000596756 ABCC1P33527 1531 aa22.11■■□□□ 1.13
IRF3-212ENST00000596756 MLH3Q9UHC1 1453 aa22.1■■□□□ 1.13
IRF3-212ENST00000596756 CEBPAP49715 358 aaPredicted RBP22.1■■□□□ 1.13
IRF3-212ENST00000596756 REREQ9P2R6 1566 aa22.1■■□□□ 1.13
IRF3-212ENST00000596756 DIP2CQ9Y2E4 1556 aa22.09■■□□□ 1.13
IRF3-212ENST00000596756 TRAPPC8Q9Y2L5 1435 aa22.09■■□□□ 1.13
IRF3-212ENST00000596756 SETD1BQ9UPS6 1966 aaKnown RBP22.07■■□□□ 1.12
IRF3-212ENST00000596756 PREX1Q8TCU6 1659 aa22.06■■□□□ 1.12
IRF3-212ENST00000596756 CERKQ8TCT0 537 aa22.05■■□□□ 1.12
IRF3-212ENST00000596756 CDC42BPAQ5VT25 1732 aa22.05■■□□□ 1.12
IRF3-212ENST00000596756 ABCA6Q8N139 1617 aa22.05■■□□□ 1.12
IRF3-212ENST00000596756 ITSN2Q9NZM3 1697 aa22.04■■□□□ 1.12
IRF3-212ENST00000596756 AGLP35573 1532 aa22.03■■□□□ 1.12
IRF3-212ENST00000596756 MYT1LQ9UL68 1186 aa22.03■■□□□ 1.12
IRF3-212ENST00000596756 GPATCH8Q9UKJ3 1502 aaKnown RBP22.02■■□□□ 1.12
IRF3-212ENST00000596756 STRCQ7RTU9 1775 aa22.01■■□□□ 1.11
IRF3-212ENST00000596756 SAMD9LQ8IVG5 1584 aa21.99■■□□□ 1.11
IRF3-212ENST00000596756 KIDINS220Q9ULH0 1771 aa21.98■■□□□ 1.11
IRF3-212ENST00000596756 C3P01024 1663 aa21.96■■□□□ 1.11
IRF3-212ENST00000596756 ZNF777Q9ULD5 760 aaPredicted RBP21.96■■□□□ 1.11
IRF3-212ENST00000596756 UHRF1BP1Q6BDS2 1440 aa21.96■■□□□ 1.11
IRF3-212ENST00000596756 SYCP2Q9BX26 1530 aa21.96■■□□□ 1.11
IRF3-212ENST00000596756 DMRT2Q9Y5R5 561 aa21.94■■□□□ 1.1
IRF3-212ENST00000596756 KIAA1107Q9UPP5 1409 aa21.93■■□□□ 1.1
IRF3-212ENST00000596756 MTUS2Q5JR59 1369 aa21.92■■□□□ 1.1
IRF3-212ENST00000596756 CCNB3Q8WWL7 1395 aa21.91■■□□□ 1.1
IRF3-212ENST00000596756 HNRNPMP52272 730 aaKnown RBP eCLIP21.91■■□□□ 1.1
IRF3-212ENST00000596756 CFDP1Q9UEE9 299 aaPredicted RBP21.91■■□□□ 1.1
IRF3-212ENST00000596756 PLEKHH2Q8IVE3 1493 aa21.9■■□□□ 1.1
IRF3-212ENST00000596756 CEP162Q5TB80 1403 aa21.89■■□□□ 1.1
IRF3-212ENST00000596756 SPAG9O60271 1321 aaKnown RBP21.89■■□□□ 1.1
IRF3-212ENST00000596756 PTPRTO14522 1441 aa21.89■■□□□ 1.09
IRF3-212ENST00000596756 CNTLNQ9NXG0 1405 aa21.89■■□□□ 1.09
IRF3-212ENST00000596756 ATP7AQ04656 1500 aa21.86■■□□□ 1.09
IRF3-212ENST00000596756 EHBP1L1Q8N3D4 1523 aa21.86■■□□□ 1.09
IRF3-212ENST00000596756 INO80Q9ULG1 1556 aaPredicted RBP21.86■■□□□ 1.09
IRF3-212ENST00000596756 ESF1Q9H501 851 aaKnown RBP21.85■■□□□ 1.09
IRF3-212ENST00000596756 TIAM1Q13009 1591 aa21.85■■□□□ 1.09
IRF3-212ENST00000596756 PLXNC1O60486 1568 aa21.83■■□□□ 1.09
IRF3-212ENST00000596756 NPATQ14207 1427 aa21.82■■□□□ 1.08
IRF3-212ENST00000596756 MROH2AA6NES4 1674 aa21.82■■□□□ 1.08
IRF3-212ENST00000596756 ZNF644Q9H582 1327 aaPredicted RBP21.81■■□□□ 1.08
IRF3-212ENST00000596756 NCOA1Q15788 1441 aa21.81■■□□□ 1.08
IRF3-212ENST00000596756 ZMYM3Q14202 1370 aa21.81■■□□□ 1.08
IRF3-212ENST00000596756 MBD5Q9P267 1494 aa21.81■■□□□ 1.08
IRF3-212ENST00000596756 A2MP01023 1474 aa21.8■■□□□ 1.08
IRF3-212ENST00000596756 LTBP4Q8N2S1 1624 aa21.79■■□□□ 1.08
IRF3-212ENST00000596756 SUPT6HQ7KZ85 1726 aaKnown RBP21.77■■□□□ 1.08
IRF3-212ENST00000596756 NCOA2Q15596 1464 aa21.74■■□□□ 1.07
IRF3-212ENST00000596756 RTEL1-TNFRSF6BF6WH68 1400 aa21.73■■□□□ 1.07
IRF3-212ENST00000596756 PTPRKQ15262 1439 aa21.72■■□□□ 1.07
IRF3-212ENST00000596756 CAMSAP1Q5T5Y3 1602 aa21.72■■□□□ 1.07
IRF3-212ENST00000596756 CLTCQ00610 1675 aaKnown RBP21.71■■□□□ 1.07
IRF3-212ENST00000596756 ADGBQ8N7X0 1667 aa21.71■■□□□ 1.07
IRF3-212ENST00000596756 PPP6R1Q9UPN7 881 aa21.7■■□□□ 1.06
IRF3-212ENST00000596756 IQSEC2Q5JU85 1478 aa21.7■■□□□ 1.06
IRF3-212ENST00000596756 GGT6Q6P531 493 aa21.69■■□□□ 1.06
IRF3-212ENST00000596756 NCKAP5LQ9HCH0 1330 aa21.68■■□□□ 1.06
IRF3-212ENST00000596756 VPS8Q8N3P4 1428 aa21.68■■□□□ 1.06
IRF3-212ENST00000596756 CAMSAP2Q08AD1 1489 aa21.68■■□□□ 1.06
IRF3-212ENST00000596756 CCDC141Q6ZP82 1450 aa21.68■■□□□ 1.06
IRF3-212ENST00000596756 DHX29Q7Z478 1369 aaKnown RBP21.67■■□□□ 1.06
IRF3-212ENST00000596756 LOC105371045A0A1W2PR82 267 aa21.67■■□□□ 1.06
IRF3-212ENST00000596756 ZNF142P52746 1687 aaPredicted RBP21.66■■□□□ 1.06
IRF3-212ENST00000596756 PLA2R1Q13018 1463 aa21.65■■□□□ 1.06
IRF3-212ENST00000596756 TCOF1Q13428 1488 aaKnown RBP21.64■■□□□ 1.06
IRF3-212ENST00000596756 RSPH4AQ5TD94 716 aa21.64■■□□□ 1.05
IRF3-212ENST00000596756 MYO3AQ8NEV4 1616 aa21.64■■□□□ 1.05
IRF3-212ENST00000596756 LRRC9Q6ZRR7 1453 aa21.64■■□□□ 1.05
IRF3-212ENST00000596756 PKD2Q13563 968 aa21.63■■□□□ 1.05
IRF3-212ENST00000596756 CEP170BQ9Y4F5 1589 aaPredicted RBP21.62■■□□□ 1.05
IRF3-212ENST00000596756 ILDR2Q71H61 639 aa21.61■■□□□ 1.05
IRF3-212ENST00000596756 ARHGEF5Q12774 1597 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms