RNA–Protein interactions for RNA: ENST00000596655.1

C19orf48-207, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 2

Gene C19orf48, Length 1,639 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-207ENST00000596655 ADGRL1O94910 1474 aa29.65■■■□□ 2.34
C19orf48-207ENST00000596655 PPARGC1BQ86YN6 1023 aaKnown RBP29.63■■■□□ 2.33
C19orf48-207ENST00000596655 CDC42BPBQ9Y5S2 1711 aa29.63■■■□□ 2.33
C19orf48-207ENST00000596655 ARHGAP5Q13017 1502 aa29.62■■■□□ 2.33
C19orf48-207ENST00000596655 PREX2Q70Z35 1606 aa29.61■■■□□ 2.33
C19orf48-207ENST00000596655 CDC42BPAQ5VT25 1732 aa29.59■■■□□ 2.33
C19orf48-207ENST00000596655 EFCAB2Q5VUJ9 269 aa29.59■■■□□ 2.33
C19orf48-207ENST00000596655 SCAPERQ9BY12 1400 aa29.57■■■□□ 2.32
C19orf48-207ENST00000596655 ZMYM4Q5VZL5 1548 aa29.56■■■□□ 2.32
C19orf48-207ENST00000596655 ARHGEF40Q8TER5 1519 aa29.55■■■□□ 2.32
C19orf48-207ENST00000596655 POGZQ7Z3K3 1410 aa29.54■■■□□ 2.32
C19orf48-207ENST00000596655 MTUS2Q5JR59 1369 aa29.52■■■□□ 2.32
C19orf48-207ENST00000596655 EHBP1L1Q8N3D4 1523 aa29.49■■■□□ 2.31
C19orf48-207ENST00000596655 ZFYVE16Q7Z3T8 1539 aa29.47■■■□□ 2.31
C19orf48-207ENST00000596655 ABCC1P33527 1531 aa29.45■■■□□ 2.3
C19orf48-207ENST00000596655 MAGI2Q86UL8 1455 aa29.44■■■□□ 2.3
C19orf48-207ENST00000596655 GPATCH8Q9UKJ3 1502 aaKnown RBP29.44■■■□□ 2.3
C19orf48-207ENST00000596655 YEATS2Q9ULM3 1422 aa29.44■■■□□ 2.3
C19orf48-207ENST00000596655 ZNF518AQ6AHZ1 1483 aa29.44■■■□□ 2.3
C19orf48-207ENST00000596655 TIAM1Q13009 1591 aa29.43■■■□□ 2.3
C19orf48-207ENST00000596655 ITSN2Q9NZM3 1697 aa29.43■■■□□ 2.3
C19orf48-207ENST00000596655 KDM5CP41229 1560 aa29.41■■■□□ 2.3
C19orf48-207ENST00000596655 ZEB1P37275 1124 aaPredicted RBP29.4■■■□□ 2.3
C19orf48-207ENST00000596655 SAMD9LQ8IVG5 1584 aa29.4■■■□□ 2.3
C19orf48-207ENST00000596655 CCNB3Q8WWL7 1395 aa29.39■■■□□ 2.29
C19orf48-207ENST00000596655 ARHGEF12Q9NZN5 1544 aa29.38■■■□□ 2.29
C19orf48-207ENST00000596655 BCORL1Q5H9F3 1711 aa29.38■■■□□ 2.29
C19orf48-207ENST00000596655 APLP2Q06481 763 aa29.38■■■□□ 2.29
C19orf48-207ENST00000596655 SIGLEC1Q9BZZ2 1709 aa29.37■■■□□ 2.29
C19orf48-207ENST00000596655 ADAMTSL3P82987 1691 aa29.36■■■□□ 2.29
C19orf48-207ENST00000596655 AFAP1Q8N556 730 aa29.36■■■□□ 2.29
C19orf48-207ENST00000596655 HECW2Q9P2P5 1572 aa29.36■■■□□ 2.29
C19orf48-207ENST00000596655 SUPT6HQ7KZ85 1726 aaKnown RBP29.35■■■□□ 2.29
C19orf48-207ENST00000596655 ARID4BQ4LE39 1312 aaPredicted RBP29.35■■■□□ 2.29
C19orf48-207ENST00000596655 TRAPPC8Q9Y2L5 1435 aa29.34■■■□□ 2.29
C19orf48-207ENST00000596655 ZNF777Q9ULD5 760 aaPredicted RBP29.34■■■□□ 2.29
C19orf48-207ENST00000596655 MAP3K1Q13233 1512 aa29.32■■■□□ 2.28
C19orf48-207ENST00000596655 SYCP2Q9BX26 1530 aa29.32■■■□□ 2.28
C19orf48-207ENST00000596655 CFDP1Q9UEE9 299 aaPredicted RBP29.31■■■□□ 2.28
C19orf48-207ENST00000596655 NCOA2Q15596 1464 aa29.29■■■□□ 2.28
C19orf48-207ENST00000596655 ATP10AO60312 1499 aa29.29■■■□□ 2.28
C19orf48-207ENST00000596655 LRRC9Q6ZRR7 1453 aa29.28■■■□□ 2.28
C19orf48-207ENST00000596655 MADDQ8WXG6 1647 aa29.28■■■□□ 2.28
C19orf48-207ENST00000596655 DIP2CQ9Y2E4 1556 aa29.27■■■□□ 2.28
C19orf48-207ENST00000596655 MLH3Q9UHC1 1453 aa29.27■■■□□ 2.28
C19orf48-207ENST00000596655 ABCA6Q8N139 1617 aa29.26■■■□□ 2.27
C19orf48-207ENST00000596655 C9orf84Q5VXU9 1444 aa29.26■■■□□ 2.27
C19orf48-207ENST00000596655 PLEKHH2Q8IVE3 1493 aa29.25■■■□□ 2.27
C19orf48-207ENST00000596655 MYT1LQ9UL68 1186 aa29.25■■■□□ 2.27
C19orf48-207ENST00000596655 KIDINS220Q9ULH0 1771 aa29.24■■■□□ 2.27
C19orf48-207ENST00000596655 KIAA1107Q9UPP5 1409 aa29.23■■■□□ 2.27
C19orf48-207ENST00000596655 HNRNPMP52272 730 aaKnown RBP eCLIP29.21■■■□□ 2.27
C19orf48-207ENST00000596655 RIMS1Q86UR5 1692 aaKnown RBP29.2■■■□□ 2.26
C19orf48-207ENST00000596655 PTPRMP28827 1452 aa29.19■■■□□ 2.26
C19orf48-207ENST00000596655 KANK4Q5T7N3 995 aaPredicted RBP29.18■■■□□ 2.26
C19orf48-207ENST00000596655 REREQ9P2R6 1566 aa29.18■■■□□ 2.26
C19orf48-207ENST00000596655 ZNF644Q9H582 1327 aaPredicted RBP29.17■■■□□ 2.26
C19orf48-207ENST00000596655 FER1L4A9Z1Z3 1794 aa29.15■■■□□ 2.26
C19orf48-207ENST00000596655 INO80Q9ULG1 1556 aaPredicted RBP29.14■■■□□ 2.25
C19orf48-207ENST00000596655 MLECQ14165 292 aa29.13■■■□□ 2.25
C19orf48-207ENST00000596655 ATP7AQ04656 1500 aa29.13■■■□□ 2.25
C19orf48-207ENST00000596655 SPAG9O60271 1321 aaKnown RBP29.12■■■□□ 2.25
C19orf48-207ENST00000596655 CAMSAP2Q08AD1 1489 aa29.12■■■□□ 2.25
C19orf48-207ENST00000596655 MBD5Q9P267 1494 aa29.11■■■□□ 2.25
C19orf48-207ENST00000596655 RRBP1Q9P2E9 1410 aaKnown RBP29.08■■■□□ 2.25
C19orf48-207ENST00000596655 AGLP35573 1532 aa29.07■■■□□ 2.24
C19orf48-207ENST00000596655 MYOM3Q5VTT5 1437 aa29.02■■■□□ 2.24
C19orf48-207ENST00000596655 CCDC141Q6ZP82 1450 aa29.01■■■□□ 2.24
C19orf48-207ENST00000596655 ADGBQ8N7X0 1667 aa29■■■□□ 2.23
C19orf48-207ENST00000596655 ARHGEF5Q12774 1597 aa29■■■□□ 2.23
C19orf48-207ENST00000596655 PLXNC1O60486 1568 aa28.98■■■□□ 2.23
C19orf48-207ENST00000596655 A2MP01023 1474 aa28.97■■■□□ 2.23
C19orf48-207ENST00000596655 MIA2Q96PC5 1412 aa28.97■■■□□ 2.23
C19orf48-207ENST00000596655 RTEL1-TNFRSF6BF6WH68 1400 aa28.96■■■□□ 2.23
C19orf48-207ENST00000596655 PLPPR3Q6T4P5 718 aa28.95■■■□□ 2.23
C19orf48-207ENST00000596655 CCER1Q8TC90 406 aaPredicted RBP28.94■■■□□ 2.22
C19orf48-207ENST00000596655 RSPH4AQ5TD94 716 aa28.93■■■□□ 2.22
C19orf48-207ENST00000596655 PTPN23Q9H3S7 1636 aa28.88■■■□□ 2.21
C19orf48-207ENST00000596655 C3P01024 1663 aa28.86■■■□□ 2.21
C19orf48-207ENST00000596655 LMTK3Q96Q04 1460 aa28.85■■■□□ 2.21
C19orf48-207ENST00000596655 MAST1Q9Y2H9 1570 aa28.84■■■□□ 2.21
C19orf48-207ENST00000596655 CEBPAP49715 358 aaPredicted RBP28.84■■■□□ 2.21
C19orf48-207ENST00000596655 TSPY4P0CV99 314 aa28.83■■■□□ 2.21
C19orf48-207ENST00000596655 TSPY10P0CW01 314 aa28.83■■■□□ 2.21
C19orf48-207ENST00000596655 ESF1Q9H501 851 aaKnown RBP28.83■■■□□ 2.21
C19orf48-207ENST00000596655 FGD6Q6ZV73 1430 aa28.83■■■□□ 2.2
C19orf48-207ENST00000596655 DHX29Q7Z478 1369 aaKnown RBP28.81■■■□□ 2.2
C19orf48-207ENST00000596655 CNTLNQ9NXG0 1405 aa28.81■■■□□ 2.2
C19orf48-207ENST00000596655 MROH2AA6NES4 1674 aa28.81■■■□□ 2.2
C19orf48-207ENST00000596655 CROCC2H7BZ55 1655 aa28.8■■■□□ 2.2
C19orf48-207ENST00000596655 CLTCQ00610 1675 aaKnown RBP28.79■■■□□ 2.2
C19orf48-207ENST00000596655 PREX1Q8TCU6 1659 aa28.79■■■□□ 2.2
C19orf48-207ENST00000596655 TCOF1Q13428 1488 aaKnown RBP28.78■■■□□ 2.2
C19orf48-207ENST00000596655 GGT6Q6P531 493 aa28.76■■■□□ 2.19
C19orf48-207ENST00000596655 DNMT1P26358 1616 aaKnown RBP28.75■■■□□ 2.19
C19orf48-207ENST00000596655 SETD1BQ9UPS6 1966 aaKnown RBP28.75■■■□□ 2.19
C19orf48-207ENST00000596655 ABCC5O15440 1437 aa28.72■■■□□ 2.19
C19orf48-207ENST00000596655 SHANK2Q9UPX8 1470 aa28.72■■■□□ 2.19
C19orf48-207ENST00000596655 KIF3BO15066 747 aa28.7■■■□□ 2.19
C19orf48-207ENST00000596655 DAPK1P53355 1430 aa28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms