RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 GCC2Q8IWJ2 1684 aa23.74■■□□□ 1.39
ARHGEF1-213ENST00000595897 CNGB1Q14028 1251 aaPredicted RBP23.74■■□□□ 1.39
ARHGEF1-213ENST00000595897 ABCA5Q8WWZ7 1642 aa23.73■■□□□ 1.39
ARHGEF1-213ENST00000595897 KIF7Q2M1P5 1343 aa23.72■■□□□ 1.39
ARHGEF1-213ENST00000595897 MIA2Q96PC5 1412 aa23.72■■□□□ 1.39
ARHGEF1-213ENST00000595897 SLC4A1APQ9BWU0 796 aaKnown RBP23.71■■□□□ 1.39
ARHGEF1-213ENST00000595897 EPRSP07814 1512 aaKnown RBP23.7■■□□□ 1.38
ARHGEF1-213ENST00000595897 ANKRD30BQ9BXX2 1392 aa23.69■■□□□ 1.38
ARHGEF1-213ENST00000595897 POLR3GLQ9BT43 218 aa23.68■■□□□ 1.38
ARHGEF1-213ENST00000595897 CDK13Q14004 1512 aaKnown RBP23.66■■□□□ 1.38
ARHGEF1-213ENST00000595897 RPRD2Q5VT52 1461 aaKnown RBP23.66■■□□□ 1.38
ARHGEF1-213ENST00000595897 LAMC3Q9Y6N6 1575 aa23.64■■□□□ 1.37
ARHGEF1-213ENST00000595897 KIF21AQ7Z4S6 1674 aa23.63■■□□□ 1.37
ARHGEF1-213ENST00000595897 ZNF326Q5BKZ1 582 aaKnown RBP23.61■■□□□ 1.37
ARHGEF1-213ENST00000595897 PDS5BQ9NTI5 1447 aa23.6■■□□□ 1.37
ARHGEF1-213ENST00000595897 TEX14Q8IWB6 1497 aa23.6■■□□□ 1.37
ARHGEF1-213ENST00000595897 DAPK1P53355 1430 aa23.6■■□□□ 1.37
ARHGEF1-213ENST00000595897 SPATA31E1Q6ZUB1 1445 aa23.59■■□□□ 1.37
ARHGEF1-213ENST00000595897 ZNF644Q9H582 1327 aaPredicted RBP23.59■■□□□ 1.37
ARHGEF1-213ENST00000595897 ROCK1Q13464 1354 aa23.59■■□□□ 1.37
ARHGEF1-213ENST00000595897 MYT1LQ9UL68 1186 aa23.58■■□□□ 1.37
ARHGEF1-213ENST00000595897 CCDC136Q96JN2 1154 aa23.56■■□□□ 1.36
ARHGEF1-213ENST00000595897 IQGAP2Q13576 1575 aa23.55■■□□□ 1.36
ARHGEF1-213ENST00000595897 ABCC5O15440 1437 aa23.55■■□□□ 1.36
ARHGEF1-213ENST00000595897 NUDCQ9Y266 331 aa23.54■■□□□ 1.36
ARHGEF1-213ENST00000595897 SENP3-EIF4A1A0A087X0R7 540 aa23.54■■□□□ 1.36
ARHGEF1-213ENST00000595897 NOP58Q9Y2X3 529 aaKnown RBP23.54■■□□□ 1.36
ARHGEF1-213ENST00000595897 SMG6Q86US8 1419 aaKnown RBP23.53■■□□□ 1.36
ARHGEF1-213ENST00000595897 WDR62O43379 1518 aa23.51■■□□□ 1.35
ARHGEF1-213ENST00000595897 USP47Q96K76 1375 aa23.49■■□□□ 1.35
ARHGEF1-213ENST00000595897 NBR1Q14596 966 aa23.48■■□□□ 1.35
ARHGEF1-213ENST00000595897 DHX29Q7Z478 1369 aaKnown RBP23.48■■□□□ 1.35
ARHGEF1-213ENST00000595897 DEKP35659 375 aaKnown RBP23.48■■□□□ 1.35
ARHGEF1-213ENST00000595897 TMC1Q8TDI8 760 aa23.47■■□□□ 1.35
ARHGEF1-213ENST00000595897 ANP32AP39687 249 aaKnown RBP23.45■■□□□ 1.34
ARHGEF1-213ENST00000595897 DNMT1P26358 1616 aaKnown RBP23.44■■□□□ 1.34
ARHGEF1-213ENST00000595897 CFDP1Q9UEE9 299 aaPredicted RBP23.44■■□□□ 1.34
ARHGEF1-213ENST00000595897 ZNF777Q9ULD5 760 aaPredicted RBP23.44■■□□□ 1.34
ARHGEF1-213ENST00000595897 PAK3O75914 559 aaPredicted RBP23.43■■□□□ 1.34
ARHGEF1-213ENST00000595897 TARBP1Q13395 1621 aaKnown RBP23.43■■□□□ 1.34
ARHGEF1-213ENST00000595897 PKD2Q13563 968 aa23.42■■□□□ 1.34
ARHGEF1-213ENST00000595897 RNF123Q5XPI4 1314 aa23.4■■□□□ 1.34
ARHGEF1-213ENST00000595897 PZPP20742 1482 aa23.39■■□□□ 1.34
ARHGEF1-213ENST00000595897 PNISRQ8TF01 805 aaKnown RBP23.39■■□□□ 1.34
ARHGEF1-213ENST00000595897 DNAJC5BQ9UF47 199 aa23.39■■□□□ 1.34
ARHGEF1-213ENST00000595897 POLR1AO95602 1720 aaPredicted RBP23.38■■□□□ 1.33
ARHGEF1-213ENST00000595897 ARID4BQ4LE39 1312 aaPredicted RBP23.37■■□□□ 1.33
ARHGEF1-213ENST00000595897 KIAA1107Q9UPP5 1409 aa23.37■■□□□ 1.33
ARHGEF1-213ENST00000595897 ADAMTS12P58397 1594 aa23.36■■□□□ 1.33
ARHGEF1-213ENST00000595897 CARD11Q9BXL7 1154 aa23.36■■□□□ 1.33
ARHGEF1-213ENST00000595897 IPO9Q96P70 1041 aaKnown RBP23.36■■□□□ 1.33
ARHGEF1-213ENST00000595897 PBRM1Q86U86 1689 aa23.35■■□□□ 1.33
ARHGEF1-213ENST00000595897 NUP153P49790 1475 aaKnown RBP23.35■■□□□ 1.33
ARHGEF1-213ENST00000595897 ZBTB47Q9UFB7 747 aaPredicted RBP23.34■■□□□ 1.33
ARHGEF1-213ENST00000595897 ROCK2O75116 1388 aaKnown RBP23.34■■□□□ 1.33
ARHGEF1-213ENST00000595897 MBD5Q9P267 1494 aa23.32■■□□□ 1.32
ARHGEF1-213ENST00000595897 PRG4Q92954 1404 aaPredicted RBP23.31■■□□□ 1.32
ARHGEF1-213ENST00000595897 BCORL1Q5H9F3 1711 aa23.31■■□□□ 1.32
ARHGEF1-213ENST00000595897 CAMSAP2Q08AD1 1489 aa23.31■■□□□ 1.32
ARHGEF1-213ENST00000595897 KDM2AQ9Y2K7 1162 aa23.31■■□□□ 1.32
ARHGEF1-213ENST00000595897 RTL5Q5HYW3 569 aaPredicted RBP23.29■■□□□ 1.32
ARHGEF1-213ENST00000595897 ANKRD30AQ9BXX3 1397 aa23.29■■□□□ 1.32
ARHGEF1-213ENST00000595897 KIF15Q9NS87 1388 aa23.29■■□□□ 1.32
ARHGEF1-213ENST00000595897 DISP1Q96F81 1524 aa23.27■■□□□ 1.32
ARHGEF1-213ENST00000595897 TROQ12816 1431 aaPredicted RBP23.27■■□□□ 1.32
ARHGEF1-213ENST00000595897 ST20-MTHFSA0A0A6YYL1 179 aa23.27■■□□□ 1.32
ARHGEF1-213ENST00000595897 SALL2Q9Y467 1007 aaPredicted RBP23.27■■□□□ 1.32
ARHGEF1-213ENST00000595897 KIAA0586Q9BVV6 1533 aa23.27■■□□□ 1.31
ARHGEF1-213ENST00000595897 KIAA0556O60303 1618 aa23.26■■□□□ 1.31
ARHGEF1-213ENST00000595897 NUP155O75694 1391 aa23.25■■□□□ 1.31
ARHGEF1-213ENST00000595897 ANKRD50Q9ULJ7 1429 aa23.25■■□□□ 1.31
ARHGEF1-213ENST00000595897 MYBBP1AQ9BQG0 1328 aaKnown RBP23.25■■□□□ 1.31
ARHGEF1-213ENST00000595897 KIF14Q15058 1648 aa23.25■■□□□ 1.31
ARHGEF1-213ENST00000595897 KDM5CP41229 1560 aa23.24■■□□□ 1.31
ARHGEF1-213ENST00000595897 RAPGEF6Q8TEU7 1601 aa23.24■■□□□ 1.31
ARHGEF1-213ENST00000595897 RALBP1Q15311 655 aa23.23■■□□□ 1.31
ARHGEF1-213ENST00000595897 RRP1P56182 461 aaKnown RBP23.23■■□□□ 1.31
ARHGEF1-213ENST00000595897 NPM2Q86SE8 214 aaKnown RBP23.23■■□□□ 1.31
ARHGEF1-213ENST00000595897 BRD4O60885 1362 aaPredicted RBP23.22■■□□□ 1.31
ARHGEF1-213ENST00000595897 GPATCH8Q9UKJ3 1502 aaKnown RBP23.22■■□□□ 1.31
ARHGEF1-213ENST00000595897 DCAF11Q8TEB1 546 aa23.22■■□□□ 1.31
ARHGEF1-213ENST00000595897 EXOC6Q8TAG9 804 aa23.21■■□□□ 1.31
ARHGEF1-213ENST00000595897 RCAN3Q9UKA8 241 aa23.2■■□□□ 1.3
ARHGEF1-213ENST00000595897 RALGAPBQ86X10 1494 aa23.2■■□□□ 1.3
ARHGEF1-213ENST00000595897 LRPPRCP42704 1394 aaKnown RBP23.2■■□□□ 1.3
ARHGEF1-213ENST00000595897 UHRF1BP1Q6BDS2 1440 aa23.19■■□□□ 1.3
ARHGEF1-213ENST00000595897 ADGRL2O95490 1459 aa23.19■■□□□ 1.3
ARHGEF1-213ENST00000595897 ZNF608Q9ULD9 1512 aaPredicted RBP23.18■■□□□ 1.3
ARHGEF1-213ENST00000595897 KTN1Q86UP2 1357 aaKnown RBP23.17■■□□□ 1.3
ARHGEF1-213ENST00000595897 TSPY4P0CV99 314 aa23.15■■□□□ 1.3
ARHGEF1-213ENST00000595897 TSPY10P0CW01 314 aa23.15■■□□□ 1.3
ARHGEF1-213ENST00000595897 PLB1Q6P1J6 1458 aa23.15■■□□□ 1.3
ARHGEF1-213ENST00000595897 ADGBQ8N7X0 1667 aa23.15■■□□□ 1.3
ARHGEF1-213ENST00000595897 TCERG1O14776 1098 aaKnown RBP23.15■■□□□ 1.3
ARHGEF1-213ENST00000595897 MRC2Q9UBG0 1479 aa23.15■■□□□ 1.3
ARHGEF1-213ENST00000595897 ITSN2Q9NZM3 1697 aa23.14■■□□□ 1.29
ARHGEF1-213ENST00000595897 NLRP13Q86W25 1043 aa23.13■■□□□ 1.29
ARHGEF1-213ENST00000595897 PLEKHD1A6NEE1 506 aa23.11■■□□□ 1.29
ARHGEF1-213ENST00000595897 GRIN2AQ12879 1464 aa23.1■■□□□ 1.29
ARHGEF1-213ENST00000595897 PDE4AP27815 886 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms