RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 ZNF777Q9ULD5 760 aaPredicted RBP24.46■■□□□ 1.51
SHKBP1-205ENST00000594973 DAPK1P53355 1430 aa24.45■■□□□ 1.51
SHKBP1-205ENST00000594973 TRIM52Q96A61 297 aa24.44■■□□□ 1.5
SHKBP1-205ENST00000594973 ABCC5O15440 1437 aa24.43■■□□□ 1.5
SHKBP1-205ENST00000594973 GPATCH8Q9UKJ3 1502 aaKnown RBP24.43■■□□□ 1.5
SHKBP1-205ENST00000594973 AKNAQ7Z591 1439 aa24.42■■□□□ 1.5
SHKBP1-205ENST00000594973 GCC2Q8IWJ2 1684 aa24.41■■□□□ 1.5
SHKBP1-205ENST00000594973 KDM6BO15054 1643 aa24.41■■□□□ 1.5
SHKBP1-205ENST00000594973 CAMSAP2Q08AD1 1489 aa24.39■■□□□ 1.49
SHKBP1-205ENST00000594973 DNMT1P26358 1616 aaKnown RBP24.39■■□□□ 1.49
SHKBP1-205ENST00000594973 ADCY10Q96PN6 1610 aa24.39■■□□□ 1.49
SHKBP1-205ENST00000594973 TIMELESSQ9UNS1 1208 aa24.38■■□□□ 1.49
SHKBP1-205ENST00000594973 ITSN2Q9NZM3 1697 aa24.36■■□□□ 1.49
SHKBP1-205ENST00000594973 SHROOM2Q13796 1616 aa24.35■■□□□ 1.49
SHKBP1-205ENST00000594973 ERCC6L2Q5T890 1561 aa24.35■■□□□ 1.49
SHKBP1-205ENST00000594973 ROCK1Q13464 1354 aa24.35■■□□□ 1.49
SHKBP1-205ENST00000594973 TONSLQ96HA7 1378 aa24.34■■□□□ 1.49
SHKBP1-205ENST00000594973 PPP1R15AO75807 674 aaPredicted RBP24.32■■□□□ 1.48
SHKBP1-205ENST00000594973 ABCC10Q5T3U5 1492 aa24.3■■□□□ 1.48
SHKBP1-205ENST00000594973 MPHOSPH9Q99550 1183 aa24.29■■□□□ 1.48
SHKBP1-205ENST00000594973 SUPT16HQ9Y5B9 1047 aaKnown RBP24.28■■□□□ 1.48
SHKBP1-205ENST00000594973 DENND4BO75064 1496 aaPredicted RBP24.28■■□□□ 1.48
SHKBP1-205ENST00000594973 FOXD1Q16676 465 aa24.26■■□□□ 1.47
SHKBP1-205ENST00000594973 CDC42BPAQ5VT25 1732 aa24.25■■□□□ 1.47
SHKBP1-205ENST00000594973 TSHZ2Q9NRE2 1034 aa24.24■■□□□ 1.47
SHKBP1-205ENST00000594973 NCOA1Q15788 1441 aa24.23■■□□□ 1.47
SHKBP1-205ENST00000594973 CLASP1Q7Z460 1538 aa24.22■■□□□ 1.47
SHKBP1-205ENST00000594973 HIRIP3Q9BW71 556 aaPredicted RBP24.19■■□□□ 1.46
SHKBP1-205ENST00000594973 ABCC2Q92887 1545 aa24.19■■□□□ 1.46
SHKBP1-205ENST00000594973 HNRNPMP52272 730 aaKnown RBP eCLIP24.18■■□□□ 1.46
SHKBP1-205ENST00000594973 SLC4A1APQ9BWU0 796 aaKnown RBP24.18■■□□□ 1.46
SHKBP1-205ENST00000594973 ANKRD30AQ9BXX3 1397 aa24.17■■□□□ 1.46
SHKBP1-205ENST00000594973 CROCC2H7BZ55 1655 aa24.15■■□□□ 1.46
SHKBP1-205ENST00000594973 KCNH8Q96L42 1107 aa24.15■■□□□ 1.46
SHKBP1-205ENST00000594973 ADGBQ8N7X0 1667 aa24.15■■□□□ 1.46
SHKBP1-205ENST00000594973 ADGRL2O95490 1459 aa24.15■■□□□ 1.46
SHKBP1-205ENST00000594973 TSPY4P0CV99 314 aa24.14■■□□□ 1.45
SHKBP1-205ENST00000594973 TSPY10P0CW01 314 aa24.14■■□□□ 1.45
SHKBP1-205ENST00000594973 C9orf84Q5VXU9 1444 aa24.13■■□□□ 1.45
SHKBP1-205ENST00000594973 KDM5BQ9UGL1 1544 aa24.09■■□□□ 1.45
SHKBP1-205ENST00000594973 ANKRD50Q9ULJ7 1429 aa24.09■■□□□ 1.45
SHKBP1-205ENST00000594973 TTC37Q6PGP7 1564 aa24.08■■□□□ 1.45
SHKBP1-205ENST00000594973 ANKRD30BQ9BXX2 1392 aa24.08■■□□□ 1.45
SHKBP1-205ENST00000594973 CDC42BPBQ9Y5S2 1711 aa24.07■■□□□ 1.44
SHKBP1-205ENST00000594973 SHANK2Q9UPX8 1470 aa24.07■■□□□ 1.44
SHKBP1-205ENST00000594973 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.07■■□□□ 1.44
SHKBP1-205ENST00000594973 PREX2Q70Z35 1606 aa24.07■■□□□ 1.44
SHKBP1-205ENST00000594973 MBD5Q9P267 1494 aa24.06■■□□□ 1.44
SHKBP1-205ENST00000594973 SAMD9LQ8IVG5 1584 aa24.06■■□□□ 1.44
SHKBP1-205ENST00000594973 DDX10Q13206 875 aaKnown RBP24.06■■□□□ 1.44
SHKBP1-205ENST00000594973 PZPP20742 1482 aa24.06■■□□□ 1.44
SHKBP1-205ENST00000594973 ARHGAP5Q13017 1502 aa24.05■■□□□ 1.44
SHKBP1-205ENST00000594973 L3MBTL2Q969R5 705 aa24.05■■□□□ 1.44
SHKBP1-205ENST00000594973 ZCCHC11Q5TAX3 1644 aaKnown RBP24.02■■□□□ 1.44
SHKBP1-205ENST00000594973 KIF15Q9NS87 1388 aa24.02■■□□□ 1.44
SHKBP1-205ENST00000594973 UHRF1BP1LA0JNW5 1464 aa24.02■■□□□ 1.44
SHKBP1-205ENST00000594973 CCDC141Q6ZP82 1450 aa24.01■■□□□ 1.43
SHKBP1-205ENST00000594973 ARHGEF5Q12774 1597 aa24.01■■□□□ 1.43
SHKBP1-205ENST00000594973 PKD2Q13563 968 aa24■■□□□ 1.43
SHKBP1-205ENST00000594973 SYCP2Q9BX26 1530 aa23.99■■□□□ 1.43
SHKBP1-205ENST00000594973 RPRD2Q5VT52 1461 aaKnown RBP23.99■■□□□ 1.43
SHKBP1-205ENST00000594973 NUP155O75694 1391 aa23.98■■□□□ 1.43
SHKBP1-205ENST00000594973 RSPH4AQ5TD94 716 aa23.97■■□□□ 1.43
SHKBP1-205ENST00000594973 KIAA1107Q9UPP5 1409 aa23.94■■□□□ 1.42
SHKBP1-205ENST00000594973 MYO5CQ9NQX4 1742 aa23.94■■□□□ 1.42
SHKBP1-205ENST00000594973 PLCH2O75038 1416 aa23.91■■□□□ 1.42
SHKBP1-205ENST00000594973 TEX14Q8IWB6 1497 aa23.9■■□□□ 1.42
SHKBP1-205ENST00000594973 OSCARQ8IYS5 282 aa23.89■■□□□ 1.42
SHKBP1-205ENST00000594973 EFCAB2Q5VUJ9 269 aa23.89■■□□□ 1.41
SHKBP1-205ENST00000594973 HSPA5P11021 654 aaKnown RBP23.88■■□□□ 1.41
SHKBP1-205ENST00000594973 NBPF8Q3BBV2 869 aa23.88■■□□□ 1.41
SHKBP1-205ENST00000594973 PLEKHH2Q8IVE3 1493 aa23.87■■□□□ 1.41
SHKBP1-205ENST00000594973 ARHGEF12Q9NZN5 1544 aa23.86■■□□□ 1.41
SHKBP1-205ENST00000594973 EIF4G2P78344 907 aaKnown RBP eCLIP23.84■■□□□ 1.41
SHKBP1-205ENST00000594973 KDM5DQ9BY66 1539 aa23.81■■□□□ 1.4
SHKBP1-205ENST00000594973 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.81■■□□□ 1.4
SHKBP1-205ENST00000594973 WDR7Q9Y4E6 1490 aa23.81■■□□□ 1.4
SHKBP1-205ENST00000594973 MAST1Q9Y2H9 1570 aa23.8■■□□□ 1.4
SHKBP1-205ENST00000594973 ZNF326Q5BKZ1 582 aaKnown RBP23.79■■□□□ 1.4
SHKBP1-205ENST00000594973 TRAPPC8Q9Y2L5 1435 aa23.77■■□□□ 1.4
SHKBP1-205ENST00000594973 ABCC1P33527 1531 aa23.76■■□□□ 1.39
SHKBP1-205ENST00000594973 FAM135AQ9P2D6 1515 aa23.76■■□□□ 1.39
SHKBP1-205ENST00000594973 WASHC2AQ641Q2 1341 aa23.75■■□□□ 1.39
SHKBP1-205ENST00000594973 ANP32CO43423 234 aa23.75■■□□□ 1.39
SHKBP1-205ENST00000594973 AFAP1Q8N556 730 aa23.75■■□□□ 1.39
SHKBP1-205ENST00000594973 PLXNC1O60486 1568 aa23.73■■□□□ 1.39
SHKBP1-205ENST00000594973 ASXL2Q76L83 1435 aa23.73■■□□□ 1.39
SHKBP1-205ENST00000594973 SPAG9O60271 1321 aaKnown RBP23.7■■□□□ 1.39
SHKBP1-205ENST00000594973 DUOX2Q9NRD8 1548 aa23.7■■□□□ 1.38
SHKBP1-205ENST00000594973 NPM1P06748 294 aaKnown RBP eCLIP23.7■■□□□ 1.38
SHKBP1-205ENST00000594973 FANCAO15360 1455 aa23.68■■□□□ 1.38
SHKBP1-205ENST00000594973 C11orf95C9JLR9 678 aaPredicted RBP23.68■■□□□ 1.38
SHKBP1-205ENST00000594973 KDM2AQ9Y2K7 1162 aa23.67■■□□□ 1.38
SHKBP1-205ENST00000594973 ARAP3Q8WWN8 1544 aa23.67■■□□□ 1.38
SHKBP1-205ENST00000594973 UNC13BO14795 1591 aa23.67■■□□□ 1.38
SHKBP1-205ENST00000594973 ERBINQ96RT1 1412 aa23.65■■□□□ 1.38
SHKBP1-205ENST00000594973 RBM19Q9Y4C8 960 aaKnown RBP23.65■■□□□ 1.38
SHKBP1-205ENST00000594973 DCAF11Q8TEB1 546 aa23.64■■□□□ 1.38
SHKBP1-205ENST00000594973 ABCA9Q8IUA7 1624 aa23.64■■□□□ 1.37
SHKBP1-205ENST00000594973 MYT1LQ9UL68 1186 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms