RNA–Protein interactions for RNA: ENST00000593990.1

FARP1-209, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-209ENST00000593990 NCAPD3P42695 1498 aa13.92□□□□□ -0.18
FARP1-209ENST00000593990 MROH2BQ7Z745 1585 aa13.91□□□□□ -0.18
FARP1-209ENST00000593990 L3MBTL3Q96JM7 780 aaPredicted RBP13.88□□□□□ -0.19
FARP1-209ENST00000593990 TSHZ2Q9NRE2 1034 aa13.88□□□□□ -0.19
FARP1-209ENST00000593990 PCDH10Q9P2E7 1040 aa13.88□□□□□ -0.19
FARP1-209ENST00000593990 GTPBP6O43824 516 aaPredicted RBP13.87□□□□□ -0.19
FARP1-209ENST00000593990 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.87□□□□□ -0.19
FARP1-209ENST00000593990 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.87□□□□□ -0.19
FARP1-209ENST00000593990 BAZ1AQ9NRL2 1556 aaPredicted RBP13.86□□□□□ -0.19
FARP1-209ENST00000593990 HMGXB3Q12766 1538 aa13.85□□□□□ -0.19
FARP1-209ENST00000593990 PDCD7Q8N8D1 485 aaKnown RBP13.85□□□□□ -0.19
FARP1-209ENST00000593990 NESP48681 1621 aa13.85□□□□□ -0.19
FARP1-209ENST00000593990 SMARCA2P51531 1590 aa13.84□□□□□ -0.19
FARP1-209ENST00000593990 KDM2AQ9Y2K7 1162 aa13.83□□□□□ -0.2
FARP1-209ENST00000593990 PEG3Q9GZU2 1588 aa13.83□□□□□ -0.2
FARP1-209ENST00000593990 CABP2Q9NPB3 220 aa13.82□□□□□ -0.2
FARP1-209ENST00000593990 LCE2DQ5TA82 110 aaPredicted RBP13.81□□□□□ -0.2
FARP1-209ENST00000593990 WIZO95785 1651 aa13.8□□□□□ -0.2
FARP1-209ENST00000593990 SNPHO15079 494 aa13.79□□□□□ -0.2
FARP1-209ENST00000593990 C3orf67Q6ZVT6 689 aa13.79□□□□□ -0.2
FARP1-209ENST00000593990 ILDR1Q86SU0 546 aaPredicted RBP13.79□□□□□ -0.2
FARP1-209ENST00000593990 BAZ1BQ9UIG0 1483 aaKnown RBP13.78□□□□□ -0.2
FARP1-209ENST00000593990 RYDENQ9NUL5 291 aaKnown RBP13.77□□□□□ -0.21
FARP1-209ENST00000593990 PLSCR2Q9NRY7 297 aa13.75□□□□□ -0.21
FARP1-209ENST00000593990 G3V3G9 751 aa13.73□□□□□ -0.21
FARP1-209ENST00000593990 KIF21AQ7Z4S6 1674 aa13.72□□□□□ -0.21
FARP1-209ENST00000593990 ST18O60284 1047 aa13.69□□□□□ -0.22
FARP1-209ENST00000593990 ERCC6Q03468 1493 aa13.68□□□□□ -0.22
FARP1-209ENST00000593990 THOC2Q8NI27 1593 aaKnown RBP13.68□□□□□ -0.22
FARP1-209ENST00000593990 TMEM121BQ9BXQ6 578 aaPredicted RBP13.68□□□□□ -0.22
FARP1-209ENST00000593990 BOLA1Q9Y3E2 137 aa13.67□□□□□ -0.22
FARP1-209ENST00000593990 EFCAB3Q8N7B9 438 aa13.66□□□□□ -0.22
FARP1-209ENST00000593990 MFRPQ9BY79 579 aa13.66□□□□□ -0.22
FARP1-209ENST00000593990 DPY19L2Q6NUT2 758 aa13.64□□□□□ -0.23
FARP1-209ENST00000593990 SOX12O15370 315 aa13.63□□□□□ -0.23
FARP1-209ENST00000593990 CUX2O14529 1486 aa13.61□□□□□ -0.23
FARP1-209ENST00000593990 LAMC3Q9Y6N6 1575 aa13.61□□□□□ -0.23
FARP1-209ENST00000593990 BCANQ96GW7 911 aa13.59□□□□□ -0.23
FARP1-209ENST00000593990 RSF1Q96T23 1441 aaPredicted RBP13.57□□□□□ -0.24
FARP1-209ENST00000593990 FBXO22Q8NEZ5 403 aa13.57□□□□□ -0.24
FARP1-209ENST00000593990 NLRP6P59044 892 aa13.56□□□□□ -0.24
FARP1-209ENST00000593990 CDAN1Q8IWY9 1227 aa13.56□□□□□ -0.24
FARP1-209ENST00000593990 PHF8Q9UPP1 1060 aa13.56□□□□□ -0.24
FARP1-209ENST00000593990 PPP1R37O75864 691 aa13.51□□□□□ -0.25
FARP1-209ENST00000593990 TOP2AP11388 1531 aaKnown RBP13.5□□□□□ -0.25
FARP1-209ENST00000593990 CADPSQ9ULU8 1353 aa13.48□□□□□ -0.25
FARP1-209ENST00000593990 CADPS2Q86UW7 1296 aa13.48□□□□□ -0.25
FARP1-209ENST00000593990 MS4A4AQ96JQ5 239 aa13.46□□□□□ -0.25
FARP1-209ENST00000593990 MICALL2Q8IY33 904 aa13.45□□□□□ -0.26
FARP1-209ENST00000593990 MARVELD3Q96A59 401 aa13.44□□□□□ -0.26
FARP1-209ENST00000593990 EMP3P54852 163 aa13.43□□□□□ -0.26
FARP1-209ENST00000593990 DOK7Q18PE1 504 aa13.43□□□□□ -0.26
FARP1-209ENST00000593990 PDS5BQ9NTI5 1447 aa13.42□□□□□ -0.26
FARP1-209ENST00000593990 WDR62O43379 1518 aa13.42□□□□□ -0.26
FARP1-209ENST00000593990 PRDM2Q13029 1718 aa13.42□□□□□ -0.26
FARP1-209ENST00000593990 MRC2Q9UBG0 1479 aa13.41□□□□□ -0.26
FARP1-209ENST00000593990 ZNF710Q8N1W2 664 aa13.4□□□□□ -0.26
FARP1-209ENST00000593990 RIMBP2O15034 1052 aa13.39□□□□□ -0.27
FARP1-209ENST00000593990 CFTRP13569 1480 aa13.39□□□□□ -0.27
FARP1-209ENST00000593990 FANCD2Q9BXW9 1451 aa13.38□□□□□ -0.27
FARP1-209ENST00000593990 HOXB3P14651 431 aaPredicted RBP13.38□□□□□ -0.27
FARP1-209ENST00000593990 CCDC88BA6NC98 1476 aa13.36□□□□□ -0.27
FARP1-209ENST00000593990 CEP164Q9UPV0 1460 aa13.36□□□□□ -0.27
FARP1-209ENST00000593990 URB2Q14146 1524 aaKnown RBP13.36□□□□□ -0.27
FARP1-209ENST00000593990 WDR70Q9NW82 654 aa13.35□□□□□ -0.27
FARP1-209ENST00000593990 HOXB1P14653 301 aaPredicted RBP13.33□□□□□ -0.28
FARP1-209ENST00000593990 NBR1Q14596 966 aa13.33□□□□□ -0.28
FARP1-209ENST00000593990 FAM205CA6NFA0 338 aa13.31□□□□□ -0.28
FARP1-209ENST00000593990 ZSWIM6Q9HCJ5 1215 aa13.31□□□□□ -0.28
FARP1-209ENST00000593990 TMEM92Q6UXU6 159 aa13.3□□□□□ -0.28
FARP1-209ENST00000593990 HS3ST6Q96QI5 342 aa13.3□□□□□ -0.28
FARP1-209ENST00000593990 P3H3Q8IVL6 736 aa13.29□□□□□ -0.28
FARP1-209ENST00000593990 NCKAP5LQ9HCH0 1330 aa13.27□□□□□ -0.29
FARP1-209ENST00000593990 KCNV2Q8TDN2 545 aa13.25□□□□□ -0.29
FARP1-209ENST00000593990 ERBB3P21860 1342 aa13.22□□□□□ -0.29
FARP1-209ENST00000593990 PDE4AP27815 886 aa13.22□□□□□ -0.29
FARP1-209ENST00000593990 CRISPLD2Q9H0B8 497 aa13.22□□□□□ -0.29
FARP1-209ENST00000593990 SPNS2Q8IVW8 549 aa13.21□□□□□ -0.29
FARP1-209ENST00000593990 LARP6Q9BRS8 491 aaKnown RBP13.21□□□□□ -0.29
FARP1-209ENST00000593990 POTEB3A0JP26 581 aa13.2□□□□□ -0.3
FARP1-209ENST00000593990 POTEBQ6S5H4 581 aa13.2□□□□□ -0.3
FARP1-209ENST00000593990 ZNF608Q9ULD9 1512 aaPredicted RBP13.19□□□□□ -0.3
FARP1-209ENST00000593990 TOPBP1Q92547 1522 aa13.18□□□□□ -0.3
FARP1-209ENST00000593990 E2F4Q16254 413 aa13.18□□□□□ -0.3
FARP1-209ENST00000593990 PRKCSHP14314 528 aaPredicted RBP13.17□□□□□ -0.3
FARP1-209ENST00000593990 MFSD10Q14728 455 aa13.17□□□□□ -0.3
FARP1-209ENST00000593990 MMRN1Q13201 1228 aa13.16□□□□□ -0.3
FARP1-209ENST00000593990 GPR153Q6NV75 609 aa13.16□□□□□ -0.3
FARP1-209ENST00000593990 DDX27Q96GQ7 796 aaKnown RBP13.15□□□□□ -0.3
FARP1-209ENST00000593990 KRTAP3-3Q9BYR6 98 aa13.15□□□□□ -0.3
FARP1-209ENST00000593990 KRTAP3-2Q9BYR7 98 aa13.15□□□□□ -0.3
FARP1-209ENST00000593990 KIF3CO14782 793 aa13.14□□□□□ -0.31
FARP1-209ENST00000593990 TPRNQ4KMQ1 711 aa13.13□□□□□ -0.31
FARP1-209ENST00000593990 EIF4G3O43432 1585 aaKnown RBP13.12□□□□□ -0.31
FARP1-209ENST00000593990 DNMBPQ6XZF7 1577 aa13.12□□□□□ -0.31
FARP1-209ENST00000593990 TMC2Q8TDI7 906 aa13.12□□□□□ -0.31
FARP1-209ENST00000593990 ARHGEF1Q92888 912 aaKnown RBP13.12□□□□□ -0.31
FARP1-209ENST00000593990 TARBP1Q13395 1621 aaKnown RBP13.12□□□□□ -0.31
FARP1-209ENST00000593990 C2orf72A6NCS6 295 aa13.11□□□□□ -0.31
FARP1-209ENST00000593990 VARS2Q5ST30 1063 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms