RNA–Protein interactions for RNA: ENST00000593504.5

SYMPK-202, Transcript of symplekin, humanhuman

TSL 2

Gene SYMPK, Length 5,107 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-202ENST00000593504 FYCO1Q9BQS8 1478 aa20.15■□□□□ 0.82
SYMPK-202ENST00000593504 MRC2Q9UBG0 1479 aa20.15■□□□□ 0.82
SYMPK-202ENST00000593504 GGT6Q6P531 493 aa20.14■□□□□ 0.82
SYMPK-202ENST00000593504 RRBP1Q9P2E9 1410 aaKnown RBP20.13■□□□□ 0.81
SYMPK-202ENST00000593504 ROCK2O75116 1388 aaKnown RBP20.13■□□□□ 0.81
SYMPK-202ENST00000593504 EFCAB5A4FU69 1503 aa20.12■□□□□ 0.81
SYMPK-202ENST00000593504 CFAP53Q96M91 514 aa20.12■□□□□ 0.81
SYMPK-202ENST00000593504 NCOA2Q15596 1464 aa20.12■□□□□ 0.81
SYMPK-202ENST00000593504 SPAG9O60271 1321 aaKnown RBP20.1■□□□□ 0.81
SYMPK-202ENST00000593504 PRDM2Q13029 1718 aa20.09■□□□□ 0.81
SYMPK-202ENST00000593504 POGKQ9P215 609 aa20.09■□□□□ 0.81
SYMPK-202ENST00000593504 ZNF644Q9H582 1327 aaPredicted RBP20.08■□□□□ 0.8
SYMPK-202ENST00000593504 KIF3BO15066 747 aa20.07■□□□□ 0.8
SYMPK-202ENST00000593504 IFT140Q96RY7 1462 aa20.07■□□□□ 0.8
SYMPK-202ENST00000593504 ABCA10Q8WWZ4 1543 aa20.05■□□□□ 0.8
SYMPK-202ENST00000593504 TNNT2P45379 298 aaPredicted RBP20.03■□□□□ 0.8
SYMPK-202ENST00000593504 TIAM1Q13009 1591 aa20.03■□□□□ 0.8
SYMPK-202ENST00000593504 MLECQ14165 292 aa20.02■□□□□ 0.8
SYMPK-202ENST00000593504 LAMC3Q9Y6N6 1575 aa20.02■□□□□ 0.8
SYMPK-202ENST00000593504 UACAQ9BZF9 1416 aa20.02■□□□□ 0.8
SYMPK-202ENST00000593504 PPP4R2Q9NY27 417 aa20■□□□□ 0.79
SYMPK-202ENST00000593504 UPF2Q9HAU5 1272 aaKnown RBP20■□□□□ 0.79
SYMPK-202ENST00000593504 KTN1Q86UP2 1357 aaKnown RBP20■□□□□ 0.79
SYMPK-202ENST00000593504 PPM1GO15355 546 aaPredicted RBP20■□□□□ 0.79
SYMPK-202ENST00000593504 NEUROD2Q15784 382 aa20■□□□□ 0.79
SYMPK-202ENST00000593504 DNAJC5BQ9UF47 199 aa20■□□□□ 0.79
SYMPK-202ENST00000593504 BIVM-ERCC5R4GMW8 1640 aa19.99■□□□□ 0.79
SYMPK-202ENST00000593504 CCDC144AA2RUR9 1427 aa19.96■□□□□ 0.79
SYMPK-202ENST00000593504 SNAPC4Q5SXM2 1469 aa19.95■□□□□ 0.78
SYMPK-202ENST00000593504 SAFB2Q14151 953 aaKnown RBP eCLIP19.95■□□□□ 0.78
SYMPK-202ENST00000593504 RALBP1Q15311 655 aa19.94■□□□□ 0.78
SYMPK-202ENST00000593504 C14orf37Q86TY3 774 aa19.94■□□□□ 0.78
SYMPK-202ENST00000593504 EHBP1L1Q8N3D4 1523 aa19.94■□□□□ 0.78
SYMPK-202ENST00000593504 NUDCQ9Y266 331 aa19.94■□□□□ 0.78
SYMPK-202ENST00000593504 SRPK2P78362 688 aaKnown RBP19.92■□□□□ 0.78
SYMPK-202ENST00000593504 MAPK8IP3Q9UPT6 1336 aa19.91■□□□□ 0.78
SYMPK-202ENST00000593504 STK26Q9P289 416 aa19.9■□□□□ 0.78
SYMPK-202ENST00000593504 ST20-MTHFSA0A0A6YYL1 179 aa19.9■□□□□ 0.78
SYMPK-202ENST00000593504 MORC1Q86VD1 984 aa19.9■□□□□ 0.78
SYMPK-202ENST00000593504 ZBTB7CA1YPR0 619 aa19.89■□□□□ 0.77
SYMPK-202ENST00000593504 B4GALNT3Q6L9W6 998 aa19.89■□□□□ 0.77
SYMPK-202ENST00000593504 KIF15Q9NS87 1388 aa19.89■□□□□ 0.77
SYMPK-202ENST00000593504 CUL7Q14999 1698 aa19.89■□□□□ 0.77
SYMPK-202ENST00000593504 PLEKHG5O94827 1062 aa19.89■□□□□ 0.77
SYMPK-202ENST00000593504 PRG4Q92954 1404 aaPredicted RBP19.88■□□□□ 0.77
SYMPK-202ENST00000593504 HECW1Q76N89 1606 aa19.88■□□□□ 0.77
SYMPK-202ENST00000593504 WASHC2CQ9Y4E1 1318 aa19.88■□□□□ 0.77
SYMPK-202ENST00000593504 EIF3AQ14152 1382 aaKnown RBP19.88■□□□□ 0.77
SYMPK-202ENST00000593504 U2SURPO15042 1029 aaKnown RBP19.87■□□□□ 0.77
SYMPK-202ENST00000593504 PCF11O94913 1555 aaKnown RBP19.87■□□□□ 0.77
SYMPK-202ENST00000593504 OSCARQ8IYS5 282 aa19.87■□□□□ 0.77
SYMPK-202ENST00000593504 USP47Q96K76 1375 aa19.86■□□□□ 0.77
SYMPK-202ENST00000593504 ANKRD50Q9ULJ7 1429 aa19.86■□□□□ 0.77
SYMPK-202ENST00000593504 URB2Q14146 1524 aaKnown RBP19.86■□□□□ 0.77
SYMPK-202ENST00000593504 HDGFP51858 240 aaKnown RBP19.85■□□□□ 0.77
SYMPK-202ENST00000593504 SYNJ2O15056 1496 aa19.84■□□□□ 0.77
SYMPK-202ENST00000593504 HSP90AA1P07900 732 aaKnown RBP19.84■□□□□ 0.77
SYMPK-202ENST00000593504 MIA2Q96PC5 1412 aa19.84■□□□□ 0.77
SYMPK-202ENST00000593504 MYH16Q9H6N6 1097 aa19.83■□□□□ 0.77
SYMPK-202ENST00000593504 KIAA0586Q9BVV6 1533 aa19.82■□□□□ 0.76
SYMPK-202ENST00000593504 LAS1LQ9Y4W2 734 aaKnown RBP19.81■□□□□ 0.76
SYMPK-202ENST00000593504 IQGAP2Q13576 1575 aa19.81■□□□□ 0.76
SYMPK-202ENST00000593504 GLIPR1L2Q4G1C9 344 aa19.81■□□□□ 0.76
SYMPK-202ENST00000593504 FRAT1Q92837 279 aaPredicted RBP19.81■□□□□ 0.76
SYMPK-202ENST00000593504 HFM1A2PYH4 1435 aa19.81■□□□□ 0.76
SYMPK-202ENST00000593504 TRHP20396 242 aaPredicted RBP19.81■□□□□ 0.76
SYMPK-202ENST00000593504 FTSJ3Q8IY81 847 aaKnown RBP19.81■□□□□ 0.76
SYMPK-202ENST00000593504 SUPT6HQ7KZ85 1726 aaKnown RBP19.8■□□□□ 0.76
SYMPK-202ENST00000593504 NBR1Q14596 966 aa19.8■□□□□ 0.76
SYMPK-202ENST00000593504 PRKRIP1Q9H875 184 aaPredicted RBP19.8■□□□□ 0.76
SYMPK-202ENST00000593504 TROQ12816 1431 aaPredicted RBP19.8■□□□□ 0.76
SYMPK-202ENST00000593504 NUTM2DQ5VT03 806 aaPredicted RBP19.8■□□□□ 0.76
SYMPK-202ENST00000593504 NLRP13Q86W25 1043 aa19.79■□□□□ 0.76
SYMPK-202ENST00000593504 EPRSP07814 1512 aaKnown RBP19.78■□□□□ 0.76
SYMPK-202ENST00000593504 CDK13Q14004 1512 aaKnown RBP19.78■□□□□ 0.76
SYMPK-202ENST00000593504 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.78■□□□□ 0.763e-6■■■■□ 26.4
SYMPK-202ENST00000593504 ARHGAP5Q13017 1502 aa19.76■□□□□ 0.75
SYMPK-202ENST00000593504 MAP3K1Q13233 1512 aa19.76■□□□□ 0.75
SYMPK-202ENST00000593504 HDGFL2Q7Z4V5 671 aaPredicted RBP19.75■□□□□ 0.75
SYMPK-202ENST00000593504 PNNQ9H307 717 aaKnown RBP19.75■□□□□ 0.75
SYMPK-202ENST00000593504 CYB5RLQ6IPT4 315 aa19.74■□□□□ 0.75
SYMPK-202ENST00000593504 EIF5BO60841 1220 aaKnown RBP19.74■□□□□ 0.75
SYMPK-202ENST00000593504 PANK3Q9H999 370 aa19.74■□□□□ 0.75
SYMPK-202ENST00000593504 MYBBP1AQ9BQG0 1328 aaKnown RBP19.73■□□□□ 0.75
SYMPK-202ENST00000593504 TRAK1Q9UPV9 953 aa19.73■□□□□ 0.75
SYMPK-202ENST00000593504 ERICH6BQ5W0A0 696 aa19.72■□□□□ 0.75
SYMPK-202ENST00000593504 RCAN3Q9UKA8 241 aa19.72■□□□□ 0.75
SYMPK-202ENST00000593504 CCDC7Q96M83 1385 aa19.72■□□□□ 0.75
SYMPK-202ENST00000593504 DAPK1P53355 1430 aa19.71■□□□□ 0.75
SYMPK-202ENST00000593504 DDRGK1Q96HY6 314 aa19.7■□□□□ 0.74
SYMPK-202ENST00000593504 KIF7Q2M1P5 1343 aa19.7■□□□□ 0.74
SYMPK-202ENST00000593504 RGS3P49796 1198 aa19.7■□□□□ 0.74
SYMPK-202ENST00000593504 C9orf84Q5VXU9 1444 aa19.7■□□□□ 0.74
SYMPK-202ENST00000593504 NAIPQ13075 1403 aa19.68■□□□□ 0.74
SYMPK-202ENST00000593504 AFAP1Q8N556 730 aa19.67■□□□□ 0.74
SYMPK-202ENST00000593504 GRIN2AQ12879 1464 aa19.67■□□□□ 0.74
SYMPK-202ENST00000593504 U2AF1L5P0DN76 240 aaPredicted RBP19.67■□□□□ 0.74
SYMPK-202ENST00000593504 U2AF1Q01081 240 aaKnown RBP eCLIP19.67■□□□□ 0.74
SYMPK-202ENST00000593504 SOX12O15370 315 aa19.67■□□□□ 0.74
SYMPK-202ENST00000593504 LMOD2Q6P5Q4 547 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms