RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 FER1L4A9Z1Z3 1794 aa21.82■■□□□ 1.08
H3F3B-213ENST00000593254 HECW1Q76N89 1606 aa21.8■■□□□ 1.08
H3F3B-213ENST00000593254 UBTFP17480 764 aaKnown RBP21.8■■□□□ 1.08
H3F3B-213ENST00000593254 PLPPR3Q6T4P5 718 aa21.79■■□□□ 1.08
H3F3B-213ENST00000593254 EHMT2Q96KQ7 1210 aa21.78■■□□□ 1.08
H3F3B-213ENST00000593254 ARHGEF12Q9NZN5 1544 aa21.76■■□□□ 1.07
H3F3B-213ENST00000593254 MLECQ14165 292 aa21.74■■□□□ 1.07
H3F3B-213ENST00000593254 PREX1Q8TCU6 1659 aa21.74■■□□□ 1.07
H3F3B-213ENST00000593254 SCAPERQ9BY12 1400 aa21.73■■□□□ 1.07
H3F3B-213ENST00000593254 ARHGAP35Q9NRY4 1499 aa21.73■■□□□ 1.07
H3F3B-213ENST00000593254 PLCH2O75038 1416 aa21.72■■□□□ 1.07
H3F3B-213ENST00000593254 ATP10AO60312 1499 aa21.71■■□□□ 1.07
H3F3B-213ENST00000593254 CDK13Q14004 1512 aaKnown RBP21.7■■□□□ 1.07
H3F3B-213ENST00000593254 STRCQ7RTU9 1775 aa21.69■■□□□ 1.06
H3F3B-213ENST00000593254 C9orf84Q5VXU9 1444 aa21.69■■□□□ 1.06
H3F3B-213ENST00000593254 FMN1Q68DA7 1419 aa21.69■■□□□ 1.06
H3F3B-213ENST00000593254 SETD1BQ9UPS6 1966 aaKnown RBP21.67■■□□□ 1.06
H3F3B-213ENST00000593254 MYO5CQ9NQX4 1742 aa21.64■■□□□ 1.06
H3F3B-213ENST00000593254 CEBPAP49715 358 aaPredicted RBP21.63■■□□□ 1.05
H3F3B-213ENST00000593254 ILDR2Q71H61 639 aa21.63■■□□□ 1.05
H3F3B-213ENST00000593254 DMRT2Q9Y5R5 561 aa21.62■■□□□ 1.05
H3F3B-213ENST00000593254 DISP3Q9P2K9 1392 aa21.61■■□□□ 1.05
H3F3B-213ENST00000593254 EFCAB2Q5VUJ9 269 aa21.61■■□□□ 1.05
H3F3B-213ENST00000593254 KDM5CP41229 1560 aa21.6■■□□□ 1.05
H3F3B-213ENST00000593254 ZNF518AQ6AHZ1 1483 aa21.59■■□□□ 1.05
H3F3B-213ENST00000593254 UHRF1BP1Q6BDS2 1440 aa21.59■■□□□ 1.05
H3F3B-213ENST00000593254 SOCS7O14512 581 aa21.58■■□□□ 1.05
H3F3B-213ENST00000593254 KIF14Q15058 1648 aa21.56■■□□□ 1.04
H3F3B-213ENST00000593254 LRRIQ1Q96JM4 1722 aa21.56■■□□□ 1.04
H3F3B-213ENST00000593254 REREQ9P2R6 1566 aa21.56■■□□□ 1.04
H3F3B-213ENST00000593254 DIP2CQ9Y2E4 1556 aa21.54■■□□□ 1.04
H3F3B-213ENST00000593254 PTPRTO14522 1441 aa21.54■■□□□ 1.04
H3F3B-213ENST00000593254 AFAP1Q8N556 730 aa21.53■■□□□ 1.04
H3F3B-213ENST00000593254 ATP1B4Q9UN42 357 aaPredicted RBP21.53■■□□□ 1.04
H3F3B-213ENST00000593254 C3P01024 1663 aa21.53■■□□□ 1.04
H3F3B-213ENST00000593254 ARHGAP5Q13017 1502 aa21.5■■□□□ 1.03
H3F3B-213ENST00000593254 CDK11AQ9UQ88 783 aaPredicted RBP21.5■■□□□ 1.03
H3F3B-213ENST00000593254 TROQ12816 1431 aaPredicted RBP21.49■■□□□ 1.03
H3F3B-213ENST00000593254 ABCA6Q8N139 1617 aa21.49■■□□□ 1.03
H3F3B-213ENST00000593254 LTBP4Q8N2S1 1624 aa21.49■■□□□ 1.03
H3F3B-213ENST00000593254 MLH3Q9UHC1 1453 aa21.49■■□□□ 1.03
H3F3B-213ENST00000593254 SPATA31D1Q6ZQQ2 1576 aa21.48■■□□□ 1.03
H3F3B-213ENST00000593254 CASKIN1Q8WXD9 1431 aa21.48■■□□□ 1.03
H3F3B-213ENST00000593254 AGLP35573 1532 aa21.48■■□□□ 1.03
H3F3B-213ENST00000593254 CDC42BPBQ9Y5S2 1711 aa21.47■■□□□ 1.03
H3F3B-213ENST00000593254 CLIP1P30622 1438 aa21.46■■□□□ 1.03
H3F3B-213ENST00000593254 IQSEC2Q5JU85 1478 aa21.45■■□□□ 1.03
H3F3B-213ENST00000593254 TRAPPC8Q9Y2L5 1435 aa21.45■■□□□ 1.02
H3F3B-213ENST00000593254 CCDC18Q5T9S5 1454 aa21.45■■□□□ 1.02
H3F3B-213ENST00000593254 FYCO1Q9BQS8 1478 aa21.43■■□□□ 1.02
H3F3B-213ENST00000593254 NCOA1Q15788 1441 aa21.42■■□□□ 1.02
H3F3B-213ENST00000593254 MYT1LQ9UL68 1186 aa21.41■■□□□ 1.02
H3F3B-213ENST00000593254 ABCC1P33527 1531 aa21.4■■□□□ 1.02
H3F3B-213ENST00000593254 PREX2Q70Z35 1606 aa21.4■■□□□ 1.02
H3F3B-213ENST00000593254 KIDINS220Q9ULH0 1771 aa21.39■■□□□ 1.01
H3F3B-213ENST00000593254 ITSN2Q9NZM3 1697 aa21.39■■□□□ 1.01
H3F3B-213ENST00000593254 CNTLNQ9NXG0 1405 aa21.38■■□□□ 1.01
H3F3B-213ENST00000593254 ESF1Q9H501 851 aaKnown RBP21.36■■□□□ 1.01
H3F3B-213ENST00000593254 MROH2AA6NES4 1674 aa21.34■■□□□ 1.01
H3F3B-213ENST00000593254 CAMSAP1Q5T5Y3 1602 aa21.33■■□□□ 1.01
H3F3B-213ENST00000593254 NPATQ14207 1427 aa21.33■■□□□ 1.01
H3F3B-213ENST00000593254 CDC42BPAQ5VT25 1732 aa21.31■■□□□ 1
H3F3B-213ENST00000593254 CEP162Q5TB80 1403 aa21.29■■□□□ 1
H3F3B-213ENST00000593254 SAMD9LQ8IVG5 1584 aa21.28■■□□□ 1
H3F3B-213ENST00000593254 ZMYM3Q14202 1370 aa21.27■■□□□ 1
H3F3B-213ENST00000593254 ZNF142P52746 1687 aaPredicted RBP21.25■□□□□ 0.99
H3F3B-213ENST00000593254 PLA2R1Q13018 1463 aa21.24■□□□□ 0.99
H3F3B-213ENST00000593254 ZNF335Q9H4Z2 1342 aaPredicted RBP21.24■□□□□ 0.99
H3F3B-213ENST00000593254 NCKAP5LQ9HCH0 1330 aa21.24■□□□□ 0.99
H3F3B-213ENST00000593254 MYO3AQ8NEV4 1616 aa21.22■□□□□ 0.99
H3F3B-213ENST00000593254 SUPT6HQ7KZ85 1726 aaKnown RBP21.22■□□□□ 0.99
H3F3B-213ENST00000593254 TCOF1Q13428 1488 aaKnown RBP21.21■□□□□ 0.99
H3F3B-213ENST00000593254 PLXNC1O60486 1568 aa21.21■□□□□ 0.99
H3F3B-213ENST00000593254 CLTCQ00610 1675 aaKnown RBP21.21■□□□□ 0.99
H3F3B-213ENST00000593254 SYCP2Q9BX26 1530 aa21.2■□□□□ 0.98
H3F3B-213ENST00000593254 UBAP1LF5GYI3 381 aa21.2■□□□□ 0.98
H3F3B-213ENST00000593254 PKD2Q13563 968 aa21.2■□□□□ 0.98
H3F3B-213ENST00000593254 CEP170BQ9Y4F5 1589 aaPredicted RBP21.19■□□□□ 0.98
H3F3B-213ENST00000593254 PTPRKQ15262 1439 aa21.19■□□□□ 0.98
H3F3B-213ENST00000593254 SPAG9O60271 1321 aaKnown RBP21.18■□□□□ 0.98
H3F3B-213ENST00000593254 ATP7AQ04656 1500 aa21.18■□□□□ 0.98
H3F3B-213ENST00000593254 GPATCH8Q9UKJ3 1502 aaKnown RBP21.18■□□□□ 0.98
H3F3B-213ENST00000593254 INO80Q9ULG1 1556 aaPredicted RBP21.17■□□□□ 0.98
H3F3B-213ENST00000593254 MTUS2Q5JR59 1369 aa21.16■□□□□ 0.98
H3F3B-213ENST00000593254 ZNF777Q9ULD5 760 aaPredicted RBP21.15■□□□□ 0.98
H3F3B-213ENST00000593254 KIAA1107Q9UPP5 1409 aa21.14■□□□□ 0.98
H3F3B-213ENST00000593254 HNRNPMP52272 730 aaKnown RBP eCLIP21.14■□□□□ 0.97
H3F3B-213ENST00000593254 EHBP1L1Q8N3D4 1523 aa21.14■□□□□ 0.97
H3F3B-213ENST00000593254 A2MP01023 1474 aa21.13■□□□□ 0.97
H3F3B-213ENST00000593254 LOC105371045A0A1W2PR82 267 aa21.13■□□□□ 0.97
H3F3B-213ENST00000593254 PLEKHH2Q8IVE3 1493 aa21.1■□□□□ 0.97
H3F3B-213ENST00000593254 CCNB3Q8WWL7 1395 aa21.1■□□□□ 0.97
H3F3B-213ENST00000593254 PPP6R1Q9UPN7 881 aa21.09■□□□□ 0.97
H3F3B-213ENST00000593254 TIAM1Q13009 1591 aa21.09■□□□□ 0.97
H3F3B-213ENST00000593254 DNMT1P26358 1616 aaKnown RBP21.08■□□□□ 0.97
H3F3B-213ENST00000593254 ADGBQ8N7X0 1667 aa21.08■□□□□ 0.96
H3F3B-213ENST00000593254 A2ML1A8K2U0 1454 aa21.07■□□□□ 0.96
H3F3B-213ENST00000593254 GGT6Q6P531 493 aa21.07■□□□□ 0.96
H3F3B-213ENST00000593254 VPS8Q8N3P4 1428 aa21.06■□□□□ 0.96
H3F3B-213ENST00000593254 CFDP1Q9UEE9 299 aaPredicted RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms