RNA–Protein interactions for RNA: ENST00000593236.1

LDLRAD4-219, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 4

Gene LDLRAD4, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-219ENST00000593236 RIMS1Q86UR5 1692 aaKnown RBP20.22■□□□□ 0.83
LDLRAD4-219ENST00000593236 YEATS2Q9ULM3 1422 aa20.21■□□□□ 0.83
LDLRAD4-219ENST00000593236 CCDC18Q5T9S5 1454 aa20.21■□□□□ 0.83
LDLRAD4-219ENST00000593236 ZMYM4Q5VZL5 1548 aa20.21■□□□□ 0.83
LDLRAD4-219ENST00000593236 PLCH2O75038 1416 aa20.2■□□□□ 0.82
LDLRAD4-219ENST00000593236 LMTK3Q96Q04 1460 aa20.2■□□□□ 0.82
LDLRAD4-219ENST00000593236 SIGLEC1Q9BZZ2 1709 aa20.2■□□□□ 0.82
LDLRAD4-219ENST00000593236 ZFYVE16Q7Z3T8 1539 aa20.18■□□□□ 0.82
LDLRAD4-219ENST00000593236 FBXO41Q8TF61 875 aa20.18■□□□□ 0.82
LDLRAD4-219ENST00000593236 SCAPERQ9BY12 1400 aa20.18■□□□□ 0.82
LDLRAD4-219ENST00000593236 MAGI2Q86UL8 1455 aa20.18■□□□□ 0.82
LDLRAD4-219ENST00000593236 POGZQ7Z3K3 1410 aa20.16■□□□□ 0.82
LDLRAD4-219ENST00000593236 PLPPR3Q6T4P5 718 aa20.14■□□□□ 0.81
LDLRAD4-219ENST00000593236 MLECQ14165 292 aa20.13■□□□□ 0.81
LDLRAD4-219ENST00000593236 EFCAB2Q5VUJ9 269 aa20.12■□□□□ 0.81
LDLRAD4-219ENST00000593236 TIAM1Q13009 1591 aa20.12■□□□□ 0.81
LDLRAD4-219ENST00000593236 HSPA2P54652 639 aa20.11■□□□□ 0.81
LDLRAD4-219ENST00000593236 CDK11AQ9UQ88 783 aaPredicted RBP20.11■□□□□ 0.81
LDLRAD4-219ENST00000593236 MYO5CQ9NQX4 1742 aa20.1■□□□□ 0.81
LDLRAD4-219ENST00000593236 KIF14Q15058 1648 aa20.09■□□□□ 0.81
LDLRAD4-219ENST00000593236 APLP2Q06481 763 aa20.09■□□□□ 0.81
LDLRAD4-219ENST00000593236 ATP10AO60312 1499 aa20.08■□□□□ 0.81
LDLRAD4-219ENST00000593236 TROQ12816 1431 aaPredicted RBP20.08■□□□□ 0.8
LDLRAD4-219ENST00000593236 FER1L4A9Z1Z3 1794 aa20.06■□□□□ 0.8
LDLRAD4-219ENST00000593236 MTUS2Q5JR59 1369 aa20.06■□□□□ 0.8
LDLRAD4-219ENST00000593236 MAP3K1Q13233 1512 aa20.05■□□□□ 0.8
LDLRAD4-219ENST00000593236 C9orf84Q5VXU9 1444 aa20.04■□□□□ 0.8
LDLRAD4-219ENST00000593236 AFAP1Q8N556 730 aa20.04■□□□□ 0.8
LDLRAD4-219ENST00000593236 EHBP1L1Q8N3D4 1523 aa20.03■□□□□ 0.8
LDLRAD4-219ENST00000593236 ARHGEF12Q9NZN5 1544 aa20.03■□□□□ 0.8
LDLRAD4-219ENST00000593236 KANK4Q5T7N3 995 aaPredicted RBP20.02■□□□□ 0.8
LDLRAD4-219ENST00000593236 LRRC9Q6ZRR7 1453 aa20.02■□□□□ 0.8
LDLRAD4-219ENST00000593236 ARHGAP5Q13017 1502 aa20.02■□□□□ 0.79
LDLRAD4-219ENST00000593236 ZNF518AQ6AHZ1 1483 aa20■□□□□ 0.79
LDLRAD4-219ENST00000593236 CEBPAP49715 358 aaPredicted RBP20■□□□□ 0.79
LDLRAD4-219ENST00000593236 KDM5CP41229 1560 aa19.99■□□□□ 0.79
LDLRAD4-219ENST00000593236 CDC42BPBQ9Y5S2 1711 aa19.98■□□□□ 0.79
LDLRAD4-219ENST00000593236 PPARGC1BQ86YN6 1023 aaKnown RBP19.96■□□□□ 0.79
LDLRAD4-219ENST00000593236 MYT1LQ9UL68 1186 aa19.96■□□□□ 0.79
LDLRAD4-219ENST00000593236 DIP2CQ9Y2E4 1556 aa19.94■□□□□ 0.78
LDLRAD4-219ENST00000593236 PREX1Q8TCU6 1659 aa19.93■□□□□ 0.78
LDLRAD4-219ENST00000593236 SUPT6HQ7KZ85 1726 aaKnown RBP19.93■□□□□ 0.78
LDLRAD4-219ENST00000593236 NCOA2Q15596 1464 aa19.92■□□□□ 0.78
LDLRAD4-219ENST00000593236 MLH3Q9UHC1 1453 aa19.92■□□□□ 0.78
LDLRAD4-219ENST00000593236 CERKQ8TCT0 537 aa19.92■□□□□ 0.78
LDLRAD4-219ENST00000593236 TRAPPC8Q9Y2L5 1435 aa19.92■□□□□ 0.78
LDLRAD4-219ENST00000593236 REREQ9P2R6 1566 aa19.91■□□□□ 0.78
LDLRAD4-219ENST00000593236 PREX2Q70Z35 1606 aa19.91■□□□□ 0.78
LDLRAD4-219ENST00000593236 ABCA6Q8N139 1617 aa19.9■□□□□ 0.78
LDLRAD4-219ENST00000593236 ABCC1P33527 1531 aa19.89■□□□□ 0.77
LDLRAD4-219ENST00000593236 ITSN2Q9NZM3 1697 aa19.87■□□□□ 0.77
LDLRAD4-219ENST00000593236 CCNB3Q8WWL7 1395 aa19.87■□□□□ 0.77
LDLRAD4-219ENST00000593236 SETD1BQ9UPS6 1966 aaKnown RBP19.87■□□□□ 0.77
LDLRAD4-219ENST00000593236 CDC42BPAQ5VT25 1732 aa19.86■□□□□ 0.77
LDLRAD4-219ENST00000593236 AGLP35573 1532 aa19.86■□□□□ 0.77
LDLRAD4-219ENST00000593236 STRCQ7RTU9 1775 aa19.85■□□□□ 0.77
LDLRAD4-219ENST00000593236 GPATCH8Q9UKJ3 1502 aaKnown RBP19.84■□□□□ 0.77
LDLRAD4-219ENST00000593236 KIDINS220Q9ULH0 1771 aa19.84■□□□□ 0.77
LDLRAD4-219ENST00000593236 C3P01024 1663 aa19.84■□□□□ 0.77
LDLRAD4-219ENST00000593236 UHRF1BP1Q6BDS2 1440 aa19.84■□□□□ 0.77
LDLRAD4-219ENST00000593236 DMRT2Q9Y5R5 561 aa19.82■□□□□ 0.76
LDLRAD4-219ENST00000593236 ESF1Q9H501 851 aaKnown RBP19.81■□□□□ 0.76
LDLRAD4-219ENST00000593236 ZNF777Q9ULD5 760 aaPredicted RBP19.81■□□□□ 0.76
LDLRAD4-219ENST00000593236 SAMD9LQ8IVG5 1584 aa19.78■□□□□ 0.76
LDLRAD4-219ENST00000593236 HNRNPMP52272 730 aaKnown RBP eCLIP19.78■□□□□ 0.76
LDLRAD4-219ENST00000593236 CFDP1Q9UEE9 299 aaPredicted RBP19.78■□□□□ 0.76
LDLRAD4-219ENST00000593236 MYOM3Q5VTT5 1437 aa19.77■□□□□ 0.76
LDLRAD4-219ENST00000593236 SYCP2Q9BX26 1530 aa19.75■□□□□ 0.75
LDLRAD4-219ENST00000593236 SPAG9O60271 1321 aaKnown RBP19.75■□□□□ 0.75
LDLRAD4-219ENST00000593236 CNTLNQ9NXG0 1405 aa19.74■□□□□ 0.75
LDLRAD4-219ENST00000593236 PTPRTO14522 1441 aa19.73■□□□□ 0.75
LDLRAD4-219ENST00000593236 ZNF644Q9H582 1327 aaPredicted RBP19.72■□□□□ 0.75
LDLRAD4-219ENST00000593236 FGD6Q6ZV73 1430 aa19.71■□□□□ 0.75
LDLRAD4-219ENST00000593236 KIAA1107Q9UPP5 1409 aa19.71■□□□□ 0.75
LDLRAD4-219ENST00000593236 ZMYM3Q14202 1370 aa19.7■□□□□ 0.74
LDLRAD4-219ENST00000593236 CAMSAP2Q08AD1 1489 aa19.7■□□□□ 0.74
LDLRAD4-219ENST00000593236 MIA2Q96PC5 1412 aa19.69■□□□□ 0.74
LDLRAD4-219ENST00000593236 MROH2AA6NES4 1674 aa19.68■□□□□ 0.74
LDLRAD4-219ENST00000593236 ATP7AQ04656 1500 aa19.68■□□□□ 0.74
LDLRAD4-219ENST00000593236 NCOA1Q15788 1441 aa19.68■□□□□ 0.74
LDLRAD4-219ENST00000593236 PLEKHH2Q8IVE3 1493 aa19.67■□□□□ 0.74
LDLRAD4-219ENST00000593236 PTPN23Q9H3S7 1636 aa19.67■□□□□ 0.74
LDLRAD4-219ENST00000593236 NPATQ14207 1427 aa19.67■□□□□ 0.74
LDLRAD4-219ENST00000593236 INO80Q9ULG1 1556 aaPredicted RBP19.66■□□□□ 0.74
LDLRAD4-219ENST00000593236 A2MP01023 1474 aa19.66■□□□□ 0.74
LDLRAD4-219ENST00000593236 PLXNC1O60486 1568 aa19.65■□□□□ 0.74
LDLRAD4-219ENST00000593236 LTBP4Q8N2S1 1624 aa19.65■□□□□ 0.74
LDLRAD4-219ENST00000593236 CLTCQ00610 1675 aaKnown RBP19.64■□□□□ 0.73
LDLRAD4-219ENST00000593236 CAMSAP1Q5T5Y3 1602 aa19.63■□□□□ 0.73
LDLRAD4-219ENST00000593236 TCOF1Q13428 1488 aaKnown RBP19.63■□□□□ 0.73
LDLRAD4-219ENST00000593236 FAM50AQ14320 339 aaKnown RBP19.63■□□□□ 0.73
LDLRAD4-219ENST00000593236 GGT6Q6P531 493 aa19.63■□□□□ 0.73
LDLRAD4-219ENST00000593236 NCKAP5LQ9HCH0 1330 aa19.6■□□□□ 0.73
LDLRAD4-219ENST00000593236 MBD5Q9P267 1494 aa19.6■□□□□ 0.73
LDLRAD4-219ENST00000593236 PTPRKQ15262 1439 aa19.59■□□□□ 0.73
LDLRAD4-219ENST00000593236 RRBP1Q9P2E9 1410 aaKnown RBP19.59■□□□□ 0.73
LDLRAD4-219ENST00000593236 ADGBQ8N7X0 1667 aa19.58■□□□□ 0.72
LDLRAD4-219ENST00000593236 PPP6R1Q9UPN7 881 aa19.57■□□□□ 0.72
LDLRAD4-219ENST00000593236 CCDC141Q6ZP82 1450 aa19.56■□□□□ 0.72
LDLRAD4-219ENST00000593236 ARHGEF5Q12774 1597 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms