RNA–Protein interactions for RNA: ENST00000590523.1

LINC00662-206, long intergenic non-protein coding RNA 662, humanhuman

TSL 1 (best) BASIC

Gene LINC00662, Length 2,053 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-206ENST00000590523 HSPA5P11021 654 aaKnown RBP17.71■□□□□ 0.43
LINC00662-206ENST00000590523 KIAA0556O60303 1618 aa17.71■□□□□ 0.43
LINC00662-206ENST00000590523 DAPK1P53355 1430 aa17.7■□□□□ 0.42
LINC00662-206ENST00000590523 CNTLNQ9NXG0 1405 aa17.69■□□□□ 0.42
LINC00662-206ENST00000590523 WASHC2AQ641Q2 1341 aa17.68■□□□□ 0.42
LINC00662-206ENST00000590523 FBLN2P98095 1184 aa17.68■□□□□ 0.42
LINC00662-206ENST00000590523 BCANQ96GW7 911 aa17.68■□□□□ 0.42
LINC00662-206ENST00000590523 CDK11AQ9UQ88 783 aaPredicted RBP17.68■□□□□ 0.42
LINC00662-206ENST00000590523 RPRD2Q5VT52 1461 aaKnown RBP17.68■□□□□ 0.42
LINC00662-206ENST00000590523 RBM19Q9Y4C8 960 aaKnown RBP17.68■□□□□ 0.42
LINC00662-206ENST00000590523 RAPGEF6Q8TEU7 1601 aa17.67■□□□□ 0.42
LINC00662-206ENST00000590523 CHMP7Q8WUX9 453 aaPredicted RBP17.67■□□□□ 0.42
LINC00662-206ENST00000590523 POLR1AO95602 1720 aaPredicted RBP17.66■□□□□ 0.42
LINC00662-206ENST00000590523 ANKRD30BQ9BXX2 1392 aa17.66■□□□□ 0.42
LINC00662-206ENST00000590523 DISP1Q96F81 1524 aa17.66■□□□□ 0.42
LINC00662-206ENST00000590523 NCOA1Q15788 1441 aa17.65■□□□□ 0.42
LINC00662-206ENST00000590523 ABCC5O15440 1437 aa17.65■□□□□ 0.42
LINC00662-206ENST00000590523 MAGI1Q96QZ7 1491 aaPredicted RBP17.64■□□□□ 0.42
LINC00662-206ENST00000590523 L3MBTL2Q969R5 705 aa17.64■□□□□ 0.41
LINC00662-206ENST00000590523 NUP153P49790 1475 aaKnown RBP17.64■□□□□ 0.41
LINC00662-206ENST00000590523 ITSN2Q9NZM3 1697 aa17.63■□□□□ 0.41
LINC00662-206ENST00000590523 ERICH6BQ5W0A0 696 aa17.63■□□□□ 0.41
LINC00662-206ENST00000590523 MYT1LQ9UL68 1186 aa17.62■□□□□ 0.41
LINC00662-206ENST00000590523 TEX14Q8IWB6 1497 aa17.62■□□□□ 0.41
LINC00662-206ENST00000590523 HNRNPUQ00839 825 aaKnown RBP eCLIP17.62■□□□□ 0.41
LINC00662-206ENST00000590523 ADGBQ8N7X0 1667 aa17.61■□□□□ 0.41
LINC00662-206ENST00000590523 CCDC7Q96M83 1385 aa17.61■□□□□ 0.41
LINC00662-206ENST00000590523 GRIN2AQ12879 1464 aa17.61■□□□□ 0.41
LINC00662-206ENST00000590523 SYNJ2O15056 1496 aa17.6■□□□□ 0.41
LINC00662-206ENST00000590523 FANCIQ9NVI1 1328 aa17.59■□□□□ 0.41
LINC00662-206ENST00000590523 TROQ12816 1431 aaPredicted RBP17.59■□□□□ 0.41
LINC00662-206ENST00000590523 ADCY10Q96PN6 1610 aa17.58■□□□□ 0.41
LINC00662-206ENST00000590523 SLC4A1APQ9BWU0 796 aaKnown RBP17.56■□□□□ 0.4
LINC00662-206ENST00000590523 SPATA31E1Q6ZUB1 1445 aa17.55■□□□□ 0.4
LINC00662-206ENST00000590523 ADGRL2O95490 1459 aa17.55■□□□□ 0.4
LINC00662-206ENST00000590523 CROCC2H7BZ55 1655 aa17.54■□□□□ 0.4
LINC00662-206ENST00000590523 CAMSAP2Q08AD1 1489 aa17.54■□□□□ 0.4
LINC00662-206ENST00000590523 PRKRIP1Q9H875 184 aaPredicted RBP17.54■□□□□ 0.4
LINC00662-206ENST00000590523 PZPP20742 1482 aa17.52■□□□□ 0.4
LINC00662-206ENST00000590523 ARID3CA6NKF2 412 aa17.51■□□□□ 0.39
LINC00662-206ENST00000590523 FOXD1Q16676 465 aa17.51■□□□□ 0.39
LINC00662-206ENST00000590523 NBPF8Q3BBV2 869 aa17.51■□□□□ 0.39
LINC00662-206ENST00000590523 GPATCH8Q9UKJ3 1502 aaKnown RBP17.5■□□□□ 0.39
LINC00662-206ENST00000590523 MBD5Q9P267 1494 aa17.5■□□□□ 0.39
LINC00662-206ENST00000590523 KIAA1107Q9UPP5 1409 aa17.49■□□□□ 0.39
LINC00662-206ENST00000590523 CFDP1Q9UEE9 299 aaPredicted RBP17.49■□□□□ 0.39
LINC00662-206ENST00000590523 ZBED9Q6R2W3 1325 aa17.49■□□□□ 0.39
LINC00662-206ENST00000590523 ZNF644Q9H582 1327 aaPredicted RBP17.49■□□□□ 0.39
LINC00662-206ENST00000590523 CARMIL2Q6F5E8 1435 aa17.49■□□□□ 0.39
LINC00662-206ENST00000590523 ARID4BQ4LE39 1312 aaPredicted RBP17.48■□□□□ 0.39
LINC00662-206ENST00000590523 ANKRD30AQ9BXX3 1397 aa17.48■□□□□ 0.39
LINC00662-206ENST00000590523 PRG4Q92954 1404 aaPredicted RBP17.48■□□□□ 0.39
LINC00662-206ENST00000590523 C11orf95C9JLR9 678 aaPredicted RBP17.48■□□□□ 0.39
LINC00662-206ENST00000590523 KIF7Q2M1P5 1343 aa17.47■□□□□ 0.39
LINC00662-206ENST00000590523 KIF14Q15058 1648 aa17.47■□□□□ 0.39
LINC00662-206ENST00000590523 MRS2Q9HD23 443 aa17.46■□□□□ 0.39
LINC00662-206ENST00000590523 SHANK2Q9UPX8 1470 aa17.45■□□□□ 0.38
LINC00662-206ENST00000590523 CEP170Q5SW79 1584 aa17.45■□□□□ 0.38
LINC00662-206ENST00000590523 MSH5O43196 834 aa17.44■□□□□ 0.38
LINC00662-206ENST00000590523 PPP4R2Q9NY27 417 aa17.44■□□□□ 0.38
LINC00662-206ENST00000590523 NUP160Q12769 1436 aa17.43■□□□□ 0.38
LINC00662-206ENST00000590523 PLB1Q6P1J6 1458 aa17.42■□□□□ 0.38
LINC00662-206ENST00000590523 ARHGEF12Q9NZN5 1544 aa17.41■□□□□ 0.38
LINC00662-206ENST00000590523 UHRF1BP1Q6BDS2 1440 aa17.41■□□□□ 0.38
LINC00662-206ENST00000590523 CCDC184Q52MB2 194 aa17.4■□□□□ 0.38
LINC00662-206ENST00000590523 ERICH6Q7L0X2 663 aa17.4■□□□□ 0.38
LINC00662-206ENST00000590523 ROCK2O75116 1388 aaKnown RBP17.4■□□□□ 0.38
LINC00662-206ENST00000590523 ANKRD50Q9ULJ7 1429 aa17.4■□□□□ 0.38
LINC00662-206ENST00000590523 KDM5DQ9BY66 1539 aa17.4■□□□□ 0.38
LINC00662-206ENST00000590523 JPH4Q96JJ6 628 aa17.4■□□□□ 0.38
LINC00662-206ENST00000590523 CHD1O14646 1710 aa17.39■□□□□ 0.38
LINC00662-206ENST00000590523 CDC42BPAQ5VT25 1732 aa17.39■□□□□ 0.38
LINC00662-206ENST00000590523 KDM5CP41229 1560 aa17.39■□□□□ 0.37
LINC00662-206ENST00000590523 USP47Q96K76 1375 aa17.39■□□□□ 0.37
LINC00662-206ENST00000590523 FAM9BQ8IZU0 186 aa17.39■□□□□ 0.37
LINC00662-206ENST00000590523 ABCA8O94911 1581 aa17.37■□□□□ 0.37
LINC00662-206ENST00000590523 RALGAPBQ86X10 1494 aa17.37■□□□□ 0.37
LINC00662-206ENST00000590523 PKD2Q13563 968 aa17.37■□□□□ 0.37
LINC00662-206ENST00000590523 DHX29Q7Z478 1369 aaKnown RBP17.36■□□□□ 0.37
LINC00662-206ENST00000590523 ABCC10Q5T3U5 1492 aa17.36■□□□□ 0.37
LINC00662-206ENST00000590523 PLEKHD1A6NEE1 506 aa17.35■□□□□ 0.37
LINC00662-206ENST00000590523 BCORL1Q5H9F3 1711 aa17.35■□□□□ 0.37
LINC00662-206ENST00000590523 C9orf84Q5VXU9 1444 aa17.35■□□□□ 0.37
LINC00662-206ENST00000590523 ARHGEF5Q12774 1597 aa17.34■□□□□ 0.37
LINC00662-206ENST00000590523 ZNF777Q9ULD5 760 aaPredicted RBP17.34■□□□□ 0.37
LINC00662-206ENST00000590523 SMG6Q86US8 1419 aaKnown RBP17.33■□□□□ 0.37
LINC00662-206ENST00000590523 IRX6P78412 446 aaPredicted RBP17.32■□□□□ 0.36
LINC00662-206ENST00000590523 KTN1Q86UP2 1357 aaKnown RBP17.32■□□□□ 0.36
LINC00662-206ENST00000590523 NUP155O75694 1391 aa17.3■□□□□ 0.36
LINC00662-206ENST00000590523 PTPRGP23470 1445 aa17.3■□□□□ 0.36
LINC00662-206ENST00000590523 ATP10BO94823 1461 aa17.3■□□□□ 0.36
LINC00662-206ENST00000590523 TSPY4P0CV99 314 aa17.3■□□□□ 0.36
LINC00662-206ENST00000590523 TSPY10P0CW01 314 aa17.3■□□□□ 0.36
LINC00662-206ENST00000590523 RSPH4AQ5TD94 716 aa17.26■□□□□ 0.35
LINC00662-206ENST00000590523 KIF15Q9NS87 1388 aa17.26■□□□□ 0.35
LINC00662-206ENST00000590523 ZNF326Q5BKZ1 582 aaKnown RBP17.25■□□□□ 0.35
LINC00662-206ENST00000590523 NUDCQ9Y266 331 aa17.25■□□□□ 0.35
LINC00662-206ENST00000590523 CARD11Q9BXL7 1154 aa17.24■□□□□ 0.35
LINC00662-206ENST00000590523 RNF123Q5XPI4 1314 aa17.24■□□□□ 0.35
LINC00662-206ENST00000590523 CCDC141Q6ZP82 1450 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms