RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 ZFYVE16Q7Z3T8 1539 aa34.39■■■■□ 3.1
R3HDM4-206ENST00000590454 YEATS2Q9ULM3 1422 aa34.38■■■■□ 3.09
R3HDM4-206ENST00000590454 MLECQ14165 292 aa34.35■■■■□ 3.09
R3HDM4-206ENST00000590454 TTC37Q6PGP7 1564 aa34.35■■■■□ 3.09
R3HDM4-206ENST00000590454 SCAPERQ9BY12 1400 aa34.3■■■■□ 3.08
R3HDM4-206ENST00000590454 CERKQ8TCT0 537 aa34.29■■■■□ 3.08
R3HDM4-206ENST00000590454 PLCH2O75038 1416 aa34.29■■■■□ 3.08
R3HDM4-206ENST00000590454 ATP1B4Q9UN42 357 aaPredicted RBP34.28■■■■□ 3.08
R3HDM4-206ENST00000590454 HECW1Q76N89 1606 aa34.28■■■■□ 3.08
R3HDM4-206ENST00000590454 SIGLEC1Q9BZZ2 1709 aa34.27■■■■□ 3.08
R3HDM4-206ENST00000590454 CASKIN1Q8WXD9 1431 aa34.25■■■■□ 3.07
R3HDM4-206ENST00000590454 CDK13Q14004 1512 aaKnown RBP34.24■■■■□ 3.07
R3HDM4-206ENST00000590454 LRRIQ1Q96JM4 1722 aa34.21■■■■□ 3.07
R3HDM4-206ENST00000590454 ATP10AO60312 1499 aa34.2■■■■□ 3.07
R3HDM4-206ENST00000590454 EFCAB2Q5VUJ9 269 aa34.2■■■■□ 3.07
R3HDM4-206ENST00000590454 FER1L4A9Z1Z3 1794 aa34.18■■■■□ 3.06
R3HDM4-206ENST00000590454 FYCO1Q9BQS8 1478 aa34.17■■■■□ 3.06
R3HDM4-206ENST00000590454 C9orf84Q5VXU9 1444 aa34.16■■■■□ 3.06
R3HDM4-206ENST00000590454 ARHGEF12Q9NZN5 1544 aa34.15■■■■□ 3.06
R3HDM4-206ENST00000590454 CDK11AQ9UQ88 783 aaPredicted RBP34.13■■■■□ 3.05
R3HDM4-206ENST00000590454 VPS8Q8N3P4 1428 aa34.12■■■■□ 3.05
R3HDM4-206ENST00000590454 CEBPAP49715 358 aaPredicted RBP34.1■■■■□ 3.05
R3HDM4-206ENST00000590454 DMRT2Q9Y5R5 561 aa34.07■■■■□ 3.04
R3HDM4-206ENST00000590454 PREX1Q8TCU6 1659 aa34.04■■■■□ 3.04
R3HDM4-206ENST00000590454 ZNF518AQ6AHZ1 1483 aa34.03■■■■□ 3.04
R3HDM4-206ENST00000590454 MYO5CQ9NQX4 1742 aa34.03■■■■□ 3.04
R3HDM4-206ENST00000590454 AFAP1Q8N556 730 aa34.02■■■■□ 3.04
R3HDM4-206ENST00000590454 CCDC18Q5T9S5 1454 aa34.01■■■■□ 3.04
R3HDM4-206ENST00000590454 MYT1LQ9UL68 1186 aa34■■■■□ 3.03
R3HDM4-206ENST00000590454 UHRF1BP1Q6BDS2 1440 aa33.97■■■■□ 3.03
R3HDM4-206ENST00000590454 TROQ12816 1431 aaPredicted RBP33.96■■■■□ 3.03
R3HDM4-206ENST00000590454 ARHGAP5Q13017 1502 aa33.95■■■■□ 3.03
R3HDM4-206ENST00000590454 KIF14Q15058 1648 aa33.94■■■■□ 3.02
R3HDM4-206ENST00000590454 KDM5CP41229 1560 aa33.94■■■■□ 3.02
R3HDM4-206ENST00000590454 STRCQ7RTU9 1775 aa33.88■■■■□ 3.01
R3HDM4-206ENST00000590454 ESF1Q9H501 851 aaKnown RBP33.86■■■■□ 3.01
R3HDM4-206ENST00000590454 DISP3Q9P2K9 1392 aa33.85■■■■□ 3.01
R3HDM4-206ENST00000590454 REREQ9P2R6 1566 aa33.85■■■■□ 3.01
R3HDM4-206ENST00000590454 DIP2CQ9Y2E4 1556 aa33.85■■■■□ 3.01
R3HDM4-206ENST00000590454 SETD1BQ9UPS6 1966 aaKnown RBP33.85■■■■□ 3.01
R3HDM4-206ENST00000590454 MLH3Q9UHC1 1453 aa33.84■■■■□ 3.01
R3HDM4-206ENST00000590454 TIAM1Q13009 1591 aa33.83■■■■□ 3.01
R3HDM4-206ENST00000590454 PTPRTO14522 1441 aa33.82■■■■□ 3
R3HDM4-206ENST00000590454 AGLP35573 1532 aa33.78■■■■□ 3
R3HDM4-206ENST00000590454 ILDR2Q71H61 639 aa33.77■■■■□ 3
R3HDM4-206ENST00000590454 TRAPPC8Q9Y2L5 1435 aa33.77■■■■□ 3
R3HDM4-206ENST00000590454 ABCA6Q8N139 1617 aa33.76■■■■□ 3
R3HDM4-206ENST00000590454 C3P01024 1663 aa33.74■■■□□ 2.99
R3HDM4-206ENST00000590454 MTUS2Q5JR59 1369 aa33.73■■■□□ 2.99
R3HDM4-206ENST00000590454 CDC42BPBQ9Y5S2 1711 aa33.73■■■□□ 2.99
R3HDM4-206ENST00000590454 KANK4Q5T7N3 995 aaPredicted RBP33.73■■■□□ 2.99
R3HDM4-206ENST00000590454 MAP3K1Q13233 1512 aa33.72■■■□□ 2.99
R3HDM4-206ENST00000590454 SOCS7O14512 581 aa33.71■■■□□ 2.99
R3HDM4-206ENST00000590454 ABCC1P33527 1531 aa33.7■■■□□ 2.99
R3HDM4-206ENST00000590454 CNTLNQ9NXG0 1405 aa33.7■■■□□ 2.98
R3HDM4-206ENST00000590454 EHBP1L1Q8N3D4 1523 aa33.69■■■□□ 2.98
R3HDM4-206ENST00000590454 LRRC9Q6ZRR7 1453 aa33.68■■■□□ 2.98
R3HDM4-206ENST00000590454 PREX2Q70Z35 1606 aa33.67■■■□□ 2.98
R3HDM4-206ENST00000590454 APLP2Q06481 763 aa33.64■■■□□ 2.98
R3HDM4-206ENST00000590454 NCOA1Q15788 1441 aa33.63■■■□□ 2.97
R3HDM4-206ENST00000590454 ITSN2Q9NZM3 1697 aa33.62■■■□□ 2.97
R3HDM4-206ENST00000590454 LTBP4Q8N2S1 1624 aa33.62■■■□□ 2.97
R3HDM4-206ENST00000590454 IQSEC2Q5JU85 1478 aa33.61■■■□□ 2.97
R3HDM4-206ENST00000590454 KIDINS220Q9ULH0 1771 aa33.6■■■□□ 2.97
R3HDM4-206ENST00000590454 NPATQ14207 1427 aa33.57■■■□□ 2.96
R3HDM4-206ENST00000590454 ZNF777Q9ULD5 760 aaPredicted RBP33.56■■■□□ 2.96
R3HDM4-206ENST00000590454 ZMYM3Q14202 1370 aa33.55■■■□□ 2.96
R3HDM4-206ENST00000590454 SPATA31D1Q6ZQQ2 1576 aa33.54■■■□□ 2.96
R3HDM4-206ENST00000590454 SUPT6HQ7KZ85 1726 aaKnown RBP33.53■■■□□ 2.96
R3HDM4-206ENST00000590454 NCOA2Q15596 1464 aa33.53■■■□□ 2.96
R3HDM4-206ENST00000590454 CDC42BPAQ5VT25 1732 aa33.53■■■□□ 2.96
R3HDM4-206ENST00000590454 SPAG9O60271 1321 aaKnown RBP33.52■■■□□ 2.96
R3HDM4-206ENST00000590454 SAMD9LQ8IVG5 1584 aa33.51■■■□□ 2.96
R3HDM4-206ENST00000590454 CAMSAP1Q5T5Y3 1602 aa33.51■■■□□ 2.96
R3HDM4-206ENST00000590454 GPATCH8Q9UKJ3 1502 aaKnown RBP33.5■■■□□ 2.95
R3HDM4-206ENST00000590454 MROH2AA6NES4 1674 aa33.48■■■□□ 2.95
R3HDM4-206ENST00000590454 CCNB3Q8WWL7 1395 aa33.47■■■□□ 2.95
R3HDM4-206ENST00000590454 HNRNPMP52272 730 aaKnown RBP eCLIP33.47■■■□□ 2.95
R3HDM4-206ENST00000590454 NCKAP5LQ9HCH0 1330 aa33.47■■■□□ 2.95
R3HDM4-206ENST00000590454 PPARGC1BQ86YN6 1023 aaKnown RBP33.46■■■□□ 2.95
R3HDM4-206ENST00000590454 SYCP2Q9BX26 1530 aa33.43■■■□□ 2.94
R3HDM4-206ENST00000590454 PKD2Q13563 968 aa33.42■■■□□ 2.94
R3HDM4-206ENST00000590454 ZNF335Q9H4Z2 1342 aaPredicted RBP33.41■■■□□ 2.94
R3HDM4-206ENST00000590454 KIAA1107Q9UPP5 1409 aa33.39■■■□□ 2.94
R3HDM4-206ENST00000590454 UBAP1LF5GYI3 381 aa33.38■■■□□ 2.93
R3HDM4-206ENST00000590454 CFDP1Q9UEE9 299 aaPredicted RBP33.38■■■□□ 2.93
R3HDM4-206ENST00000590454 ATP7AQ04656 1500 aa33.37■■■□□ 2.93
R3HDM4-206ENST00000590454 A2MP01023 1474 aa33.37■■■□□ 2.93
R3HDM4-206ENST00000590454 PLA2R1Q13018 1463 aa33.37■■■□□ 2.93
R3HDM4-206ENST00000590454 PLEKHH2Q8IVE3 1493 aa33.37■■■□□ 2.93
R3HDM4-206ENST00000590454 GGT6Q6P531 493 aa33.36■■■□□ 2.93
R3HDM4-206ENST00000590454 PTPRKQ15262 1439 aa33.34■■■□□ 2.93
R3HDM4-206ENST00000590454 PPP6R1Q9UPN7 881 aa33.33■■■□□ 2.93
R3HDM4-206ENST00000590454 CLTCQ00610 1675 aaKnown RBP33.33■■■□□ 2.93
R3HDM4-206ENST00000590454 PLXNC1O60486 1568 aa33.32■■■□□ 2.92
R3HDM4-206ENST00000590454 ZNF644Q9H582 1327 aaPredicted RBP33.3■■■□□ 2.92
R3HDM4-206ENST00000590454 TCOF1Q13428 1488 aaKnown RBP33.3■■■□□ 2.92
R3HDM4-206ENST00000590454 MYO3AQ8NEV4 1616 aa33.29■■■□□ 2.92
R3HDM4-206ENST00000590454 INO80Q9ULG1 1556 aaPredicted RBP33.29■■■□□ 2.92
R3HDM4-206ENST00000590454 CEP170BQ9Y4F5 1589 aaPredicted RBP33.29■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms