RNA–Protein interactions for RNA: ENST00000589925.1

SAFB2-204, Transcript of scaffold attachment factor B2, humanhuman

TSL 3

Gene SAFB2, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-204ENST00000589925 SCAPERQ9BY12 1400 aa26.75■■□□□ 1.87
SAFB2-204ENST00000589925 MTUS2Q5JR59 1369 aa26.75■■□□□ 1.87
SAFB2-204ENST00000589925 POGZQ7Z3K3 1410 aa26.73■■□□□ 1.87
SAFB2-204ENST00000589925 AEBP2Q6ZN18 517 aaPredicted RBP26.73■■□□□ 1.87
SAFB2-204ENST00000589925 CDC42BPBQ9Y5S2 1711 aa26.73■■□□□ 1.87
SAFB2-204ENST00000589925 ZMYM4Q5VZL5 1548 aa26.71■■□□□ 1.87
SAFB2-204ENST00000589925 EHBP1L1Q8N3D4 1523 aa26.71■■□□□ 1.87
SAFB2-204ENST00000589925 CDC42BPAQ5VT25 1732 aa26.69■■□□□ 1.86
SAFB2-204ENST00000589925 GPATCH8Q9UKJ3 1502 aaKnown RBP26.69■■□□□ 1.86
SAFB2-204ENST00000589925 TIAM1Q13009 1591 aa26.68■■□□□ 1.86
SAFB2-204ENST00000589925 ARHGEF40Q8TER5 1519 aa26.66■■□□□ 1.86
SAFB2-204ENST00000589925 MAGI2Q86UL8 1455 aa26.64■■□□□ 1.86
SAFB2-204ENST00000589925 ABCC1P33527 1531 aa26.64■■□□□ 1.85
SAFB2-204ENST00000589925 ZNF518AQ6AHZ1 1483 aa26.63■■□□□ 1.85
SAFB2-204ENST00000589925 CCNB3Q8WWL7 1395 aa26.63■■□□□ 1.85
SAFB2-204ENST00000589925 ZFYVE16Q7Z3T8 1539 aa26.61■■□□□ 1.85
SAFB2-204ENST00000589925 ARHGEF12Q9NZN5 1544 aa26.61■■□□□ 1.85
SAFB2-204ENST00000589925 YEATS2Q9ULM3 1422 aa26.61■■□□□ 1.85
SAFB2-204ENST00000589925 MAP3K1Q13233 1512 aa26.6■■□□□ 1.85
SAFB2-204ENST00000589925 KDM5CP41229 1560 aa26.6■■□□□ 1.85
SAFB2-204ENST00000589925 SAMD9LQ8IVG5 1584 aa26.58■■□□□ 1.85
SAFB2-204ENST00000589925 LRRC9Q6ZRR7 1453 aa26.58■■□□□ 1.85
SAFB2-204ENST00000589925 AFAP1Q8N556 730 aa26.58■■□□□ 1.85
SAFB2-204ENST00000589925 CFDP1Q9UEE9 299 aaPredicted RBP26.57■■□□□ 1.84
SAFB2-204ENST00000589925 TRAPPC8Q9Y2L5 1435 aa26.56■■□□□ 1.84
SAFB2-204ENST00000589925 NCOA2Q15596 1464 aa26.55■■□□□ 1.84
SAFB2-204ENST00000589925 ITSN2Q9NZM3 1697 aa26.55■■□□□ 1.84
SAFB2-204ENST00000589925 SUPT6HQ7KZ85 1726 aaKnown RBP26.54■■□□□ 1.84
SAFB2-204ENST00000589925 ZNF777Q9ULD5 760 aaPredicted RBP26.54■■□□□ 1.84
SAFB2-204ENST00000589925 SYCP2Q9BX26 1530 aa26.51■■□□□ 1.83
SAFB2-204ENST00000589925 KIAA1107Q9UPP5 1409 aa26.51■■□□□ 1.83
SAFB2-204ENST00000589925 KANK4Q5T7N3 995 aaPredicted RBP26.51■■□□□ 1.83
SAFB2-204ENST00000589925 HECW2Q9P2P5 1572 aa26.5■■□□□ 1.83
SAFB2-204ENST00000589925 MLH3Q9UHC1 1453 aa26.5■■□□□ 1.83
SAFB2-204ENST00000589925 PLEKHH2Q8IVE3 1493 aa26.49■■□□□ 1.83
SAFB2-204ENST00000589925 ATP10AO60312 1499 aa26.48■■□□□ 1.83
SAFB2-204ENST00000589925 SIGLEC1Q9BZZ2 1709 aa26.48■■□□□ 1.83
SAFB2-204ENST00000589925 ARID4BQ4LE39 1312 aaPredicted RBP26.47■■□□□ 1.83
SAFB2-204ENST00000589925 HNRNPMP52272 730 aaKnown RBP eCLIP26.46■■□□□ 1.831e-7■■■■■ 27.3
SAFB2-204ENST00000589925 C9orf84Q5VXU9 1444 aa26.46■■□□□ 1.83
SAFB2-204ENST00000589925 BCORL1Q5H9F3 1711 aa26.45■■□□□ 1.83
SAFB2-204ENST00000589925 ZNF644Q9H582 1327 aaPredicted RBP26.45■■□□□ 1.83
SAFB2-204ENST00000589925 ADAMTSL3P82987 1691 aa26.45■■□□□ 1.82
SAFB2-204ENST00000589925 DIP2CQ9Y2E4 1556 aa26.44■■□□□ 1.82
SAFB2-204ENST00000589925 ABCA6Q8N139 1617 aa26.41■■□□□ 1.82
SAFB2-204ENST00000589925 MBD5Q9P267 1494 aa26.41■■□□□ 1.82
SAFB2-204ENST00000589925 APLP2Q06481 763 aa26.4■■□□□ 1.82
SAFB2-204ENST00000589925 KIDINS220Q9ULH0 1771 aa26.39■■□□□ 1.82
SAFB2-204ENST00000589925 MYT1LQ9UL68 1186 aa26.39■■□□□ 1.82
SAFB2-204ENST00000589925 REREQ9P2R6 1566 aa26.38■■□□□ 1.81
SAFB2-204ENST00000589925 CAMSAP2Q08AD1 1489 aa26.37■■□□□ 1.81
SAFB2-204ENST00000589925 MADDQ8WXG6 1647 aa26.36■■□□□ 1.81
SAFB2-204ENST00000589925 SPAG9O60271 1321 aaKnown RBP26.36■■□□□ 1.81
SAFB2-204ENST00000589925 INO80Q9ULG1 1556 aaPredicted RBP26.35■■□□□ 1.81
SAFB2-204ENST00000589925 PTPRMP28827 1452 aa26.34■■□□□ 1.81
SAFB2-204ENST00000589925 MYOM3Q5VTT5 1437 aa26.33■■□□□ 1.81
SAFB2-204ENST00000589925 ATP7AQ04656 1500 aa26.33■■□□□ 1.81
SAFB2-204ENST00000589925 MIA2Q96PC5 1412 aa26.31■■□□□ 1.8
SAFB2-204ENST00000589925 AGLP35573 1532 aa26.29■■□□□ 1.8
SAFB2-204ENST00000589925 MLECQ14165 292 aa26.29■■□□□ 1.8
SAFB2-204ENST00000589925 CCDC141Q6ZP82 1450 aa26.29■■□□□ 1.8
SAFB2-204ENST00000589925 RTEL1-TNFRSF6BF6WH68 1400 aa26.26■■□□□ 1.79
SAFB2-204ENST00000589925 ARHGEF5Q12774 1597 aa26.25■■□□□ 1.79
SAFB2-204ENST00000589925 RSPH4AQ5TD94 716 aa26.25■■□□□ 1.79
SAFB2-204ENST00000589925 RIMS1Q86UR5 1692 aaKnown RBP26.25■■□□□ 1.79
SAFB2-204ENST00000589925 PLXNC1O60486 1568 aa26.23■■□□□ 1.79
SAFB2-204ENST00000589925 A2MP01023 1474 aa26.21■■□□□ 1.79
SAFB2-204ENST00000589925 FER1L4A9Z1Z3 1794 aa26.2■■□□□ 1.79
SAFB2-204ENST00000589925 FGD6Q6ZV73 1430 aa26.17■■□□□ 1.78
SAFB2-204ENST00000589925 ADGBQ8N7X0 1667 aa26.16■■□□□ 1.78
SAFB2-204ENST00000589925 PTPN23Q9H3S7 1636 aa26.14■■□□□ 1.78
SAFB2-204ENST00000589925 TSPY4P0CV99 314 aa26.13■■□□□ 1.77
SAFB2-204ENST00000589925 TSPY10P0CW01 314 aa26.13■■□□□ 1.77
SAFB2-204ENST00000589925 MAST1Q9Y2H9 1570 aa26.12■■□□□ 1.77
SAFB2-204ENST00000589925 TCOF1Q13428 1488 aaKnown RBP26.12■■□□□ 1.77
SAFB2-204ENST00000589925 DHX29Q7Z478 1369 aaKnown RBP26.11■■□□□ 1.77
SAFB2-204ENST00000589925 ABCC5O15440 1437 aa26.06■■□□□ 1.76
SAFB2-204ENST00000589925 PLPPR3Q6T4P5 718 aa26.06■■□□□ 1.76
SAFB2-204ENST00000589925 CNTLNQ9NXG0 1405 aa26.05■■□□□ 1.76
SAFB2-204ENST00000589925 SHANK2Q9UPX8 1470 aa26.04■■□□□ 1.76
SAFB2-204ENST00000589925 CEBPAP49715 358 aaPredicted RBP26.04■■□□□ 1.76
SAFB2-204ENST00000589925 ESF1Q9H501 851 aaKnown RBP26.03■■□□□ 1.76
SAFB2-204ENST00000589925 DAPK1P53355 1430 aa26.03■■□□□ 1.76
SAFB2-204ENST00000589925 LMTK3Q96Q04 1460 aa26.03■■□□□ 1.76
SAFB2-204ENST00000589925 DNMT1P26358 1616 aaKnown RBP26.03■■□□□ 1.76
SAFB2-204ENST00000589925 CROCC2H7BZ55 1655 aa26.02■■□□□ 1.76
SAFB2-204ENST00000589925 GGT6Q6P531 493 aa26.01■■□□□ 1.75
SAFB2-204ENST00000589925 C3P01024 1663 aa25.99■■□□□ 1.75
SAFB2-204ENST00000589925 PPP6R1Q9UPN7 881 aa25.98■■□□□ 1.75
SAFB2-204ENST00000589925 MROH2AA6NES4 1674 aa25.97■■□□□ 1.75
SAFB2-204ENST00000589925 KIF3BO15066 747 aa25.97■■□□□ 1.75
SAFB2-204ENST00000589925 ZMYM3Q14202 1370 aa25.95■■□□□ 1.74
SAFB2-204ENST00000589925 CLTCQ00610 1675 aaKnown RBP25.94■■□□□ 1.74
SAFB2-204ENST00000589925 PPARGC1BQ86YN6 1023 aaKnown RBP25.94■■□□□ 1.74
SAFB2-204ENST00000589925 DUOX2Q9NRD8 1548 aa25.93■■□□□ 1.74
SAFB2-204ENST00000589925 KIF15Q9NS87 1388 aa25.93■■□□□ 1.74
SAFB2-204ENST00000589925 FAM50AQ14320 339 aaKnown RBP25.92■■□□□ 1.74
SAFB2-204ENST00000589925 EIF2AK4Q9P2K8 1649 aaKnown RBP25.91■■□□□ 1.74
SAFB2-204ENST00000589925 PREX1Q8TCU6 1659 aa25.9■■□□□ 1.74
SAFB2-204ENST00000589925 FAM135AQ9P2D6 1515 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms