RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 MYT1Q01538 1121 aa19.49■□□□□ 0.71
RETREG3-208ENST00000589797 CCER2I3L3R5 266 aa19.49■□□□□ 0.71
RETREG3-208ENST00000589797 PPM1GO15355 546 aaPredicted RBP19.47■□□□□ 0.71
RETREG3-208ENST00000589797 ARID4BQ4LE39 1312 aaPredicted RBP19.45■□□□□ 0.7
RETREG3-208ENST00000589797 GRIN2BQ13224 1484 aa19.44■□□□□ 0.7
RETREG3-208ENST00000589797 NEFMP07197 916 aa19.44■□□□□ 0.7
RETREG3-208ENST00000589797 STK26Q9P289 416 aa19.44■□□□□ 0.7
RETREG3-208ENST00000589797 ROCK2O75116 1388 aaKnown RBP19.43■□□□□ 0.7
RETREG3-208ENST00000589797 PRG4Q92954 1404 aaPredicted RBP19.43■□□□□ 0.7
RETREG3-208ENST00000589797 RTL5Q5HYW3 569 aaPredicted RBP19.42■□□□□ 0.7
RETREG3-208ENST00000589797 SPAG9O60271 1321 aaKnown RBP19.41■□□□□ 0.7
RETREG3-208ENST00000589797 URB2Q14146 1524 aaKnown RBP19.41■□□□□ 0.7
RETREG3-208ENST00000589797 PRDM2Q13029 1718 aa19.4■□□□□ 0.7
RETREG3-208ENST00000589797 DNMBPQ6XZF7 1577 aa19.4■□□□□ 0.7
RETREG3-208ENST00000589797 TMF1P82094 1093 aa19.4■□□□□ 0.7
RETREG3-208ENST00000589797 ABCA10Q8WWZ4 1543 aa19.39■□□□□ 0.69
RETREG3-208ENST00000589797 AFAP1Q8N556 730 aa19.39■□□□□ 0.69
RETREG3-208ENST00000589797 TIAM1Q13009 1591 aa19.39■□□□□ 0.69
RETREG3-208ENST00000589797 NBPF8Q3BBV2 869 aa19.38■□□□□ 0.69
RETREG3-208ENST00000589797 CYB5RLQ6IPT4 315 aa19.38■□□□□ 0.69
RETREG3-208ENST00000589797 ANP32AP39687 249 aaKnown RBP19.37■□□□□ 0.69
RETREG3-208ENST00000589797 FYCO1Q9BQS8 1478 aa19.37■□□□□ 0.69
RETREG3-208ENST00000589797 UACAQ9BZF9 1416 aa19.36■□□□□ 0.69
RETREG3-208ENST00000589797 CDK13Q14004 1512 aaKnown RBP19.36■□□□□ 0.69
RETREG3-208ENST00000589797 ZNF608Q9ULD9 1512 aaPredicted RBP19.36■□□□□ 0.69
RETREG3-208ENST00000589797 PRKRIP1Q9H875 184 aaPredicted RBP19.36■□□□□ 0.69
RETREG3-208ENST00000589797 SNAPC4Q5SXM2 1469 aa19.35■□□□□ 0.69
RETREG3-208ENST00000589797 WASHC2AQ641Q2 1341 aa19.34■□□□□ 0.69
RETREG3-208ENST00000589797 MRC2Q9UBG0 1479 aa19.34■□□□□ 0.69
RETREG3-208ENST00000589797 NBR1Q14596 966 aa19.34■□□□□ 0.69
RETREG3-208ENST00000589797 POGKQ9P215 609 aa19.33■□□□□ 0.68
RETREG3-208ENST00000589797 PCF11O94913 1555 aaKnown RBP19.3■□□□□ 0.68
RETREG3-208ENST00000589797 CDCA8Q53HL2 280 aa19.3■□□□□ 0.68
RETREG3-208ENST00000589797 CCDC184Q52MB2 194 aa19.29■□□□□ 0.68
RETREG3-208ENST00000589797 KIF15Q9NS87 1388 aa19.29■□□□□ 0.68
RETREG3-208ENST00000589797 TRAK1Q9UPV9 953 aa19.28■□□□□ 0.68
RETREG3-208ENST00000589797 SOX12O15370 315 aa19.28■□□□□ 0.68
RETREG3-208ENST00000589797 USP47Q96K76 1375 aa19.28■□□□□ 0.68
RETREG3-208ENST00000589797 BIVM-ERCC5R4GMW8 1640 aa19.27■□□□□ 0.68
RETREG3-208ENST00000589797 PPP4R2Q9NY27 417 aa19.27■□□□□ 0.68
RETREG3-208ENST00000589797 KIF7Q2M1P5 1343 aa19.27■□□□□ 0.68
RETREG3-208ENST00000589797 KANK1Q14678 1352 aa19.27■□□□□ 0.68
RETREG3-208ENST00000589797 RSPH4AQ5TD94 716 aa19.26■□□□□ 0.67
RETREG3-208ENST00000589797 U2SURPO15042 1029 aaKnown RBP19.26■□□□□ 0.67
RETREG3-208ENST00000589797 SRPK2P78362 688 aaKnown RBP19.26■□□□□ 0.67
RETREG3-208ENST00000589797 PANK3Q9H999 370 aa19.26■□□□□ 0.67
RETREG3-208ENST00000589797 ANKRD50Q9ULJ7 1429 aa19.26■□□□□ 0.67
RETREG3-208ENST00000589797 WDR97A6NE52 1622 aa19.26■□□□□ 0.67
RETREG3-208ENST00000589797 ZBTB7CA1YPR0 619 aa19.25■□□□□ 0.67
RETREG3-208ENST00000589797 NBPF1Q3BBV0 1214 aa19.25■□□□□ 0.67
RETREG3-208ENST00000589797 FRAT1Q92837 279 aaPredicted RBP19.25■□□□□ 0.67
RETREG3-208ENST00000589797 NAIPQ13075 1403 aa19.25■□□□□ 0.67
RETREG3-208ENST00000589797 WASHC2CQ9Y4E1 1318 aa19.24■□□□□ 0.67
RETREG3-208ENST00000589797 PLB1Q6P1J6 1458 aa19.24■□□□□ 0.67
RETREG3-208ENST00000589797 C14orf37Q86TY3 774 aa19.24■□□□□ 0.67
RETREG3-208ENST00000589797 CCDC144AA2RUR9 1427 aa19.23■□□□□ 0.67
RETREG3-208ENST00000589797 CCDC146Q8IYE0 955 aa19.22■□□□□ 0.67
RETREG3-208ENST00000589797 LAS1LQ9Y4W2 734 aaKnown RBP19.22■□□□□ 0.67
RETREG3-208ENST00000589797 IFT140Q96RY7 1462 aa19.22■□□□□ 0.67
RETREG3-208ENST00000589797 C11orf95C9JLR9 678 aaPredicted RBP19.22■□□□□ 0.67
RETREG3-208ENST00000589797 ZBTB47Q9UFB7 747 aaPredicted RBP19.21■□□□□ 0.67
RETREG3-208ENST00000589797 HFM1A2PYH4 1435 aa19.21■□□□□ 0.67
RETREG3-208ENST00000589797 EPRSP07814 1512 aaKnown RBP19.21■□□□□ 0.67
RETREG3-208ENST00000589797 OSCARQ8IYS5 282 aa19.2■□□□□ 0.66
RETREG3-208ENST00000589797 TSHZ2Q9NRE2 1034 aa19.2■□□□□ 0.66
RETREG3-208ENST00000589797 EFCAB5A4FU69 1503 aa19.2■□□□□ 0.66
RETREG3-208ENST00000589797 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.2■□□□□ 0.66
RETREG3-208ENST00000589797 TRHP20396 242 aaPredicted RBP19.19■□□□□ 0.66
RETREG3-208ENST00000589797 RGS3P49796 1198 aa19.19■□□□□ 0.66
RETREG3-208ENST00000589797 RBM19Q9Y4C8 960 aaKnown RBP19.19■□□□□ 0.66
RETREG3-208ENST00000589797 LAMC3Q9Y6N6 1575 aa19.19■□□□□ 0.66
RETREG3-208ENST00000589797 KTN1Q86UP2 1357 aaKnown RBP19.19■□□□□ 0.66
RETREG3-208ENST00000589797 PTPRKQ15262 1439 aa19.18■□□□□ 0.66
RETREG3-208ENST00000589797 MORC1Q86VD1 984 aa19.18■□□□□ 0.66
RETREG3-208ENST00000589797 CCDC7Q96M83 1385 aa19.17■□□□□ 0.66
RETREG3-208ENST00000589797 NUTM2FA1L443 756 aa19.17■□□□□ 0.66
RETREG3-208ENST00000589797 CFAP53Q96M91 514 aa19.15■□□□□ 0.66
RETREG3-208ENST00000589797 KIAA0586Q9BVV6 1533 aa19.13■□□□□ 0.65
RETREG3-208ENST00000589797 TROQ12816 1431 aaPredicted RBP19.13■□□□□ 0.65
RETREG3-208ENST00000589797 PLIN1O60240 522 aa19.13■□□□□ 0.65
RETREG3-208ENST00000589797 NLRP13Q86W25 1043 aa19.12■□□□□ 0.65
RETREG3-208ENST00000589797 RALBP1Q15311 655 aa19.12■□□□□ 0.65
RETREG3-208ENST00000589797 TMEM132EQ6IEE7 984 aa19.11■□□□□ 0.65
RETREG3-208ENST00000589797 RCAN3Q9UKA8 241 aa19.11■□□□□ 0.65
RETREG3-208ENST00000589797 RRP7AQ9Y3A4 280 aaKnown RBP19.1■□□□□ 0.65
RETREG3-208ENST00000589797 DAPK1P53355 1430 aa19.09■□□□□ 0.65
RETREG3-208ENST00000589797 IQGAP2Q13576 1575 aa19.09■□□□□ 0.65
RETREG3-208ENST00000589797 ARHGEF11O15085 1522 aa19.08■□□□□ 0.64
RETREG3-208ENST00000589797 U2AF1L5P0DN76 240 aaPredicted RBP19.07■□□□□ 0.64
RETREG3-208ENST00000589797 U2AF1Q01081 240 aaKnown RBP eCLIP19.07■□□□□ 0.64
RETREG3-208ENST00000589797 EHBP1L1Q8N3D4 1523 aa19.07■□□□□ 0.64
RETREG3-208ENST00000589797 NUDCQ9Y266 331 aa19.07■□□□□ 0.64
RETREG3-208ENST00000589797 CFAP70Q5T0N1 1121 aa19.07■□□□□ 0.64
RETREG3-208ENST00000589797 LMOD2Q6P5Q4 547 aa19.07■□□□□ 0.64
RETREG3-208ENST00000589797 MIA2Q96PC5 1412 aa19.06■□□□□ 0.64
RETREG3-208ENST00000589797 C9orf84Q5VXU9 1444 aa19.05■□□□□ 0.64
RETREG3-208ENST00000589797 GRIN2AQ12879 1464 aa19.04■□□□□ 0.64
RETREG3-208ENST00000589797 ABCC5O15440 1437 aa19.04■□□□□ 0.64
RETREG3-208ENST00000589797 SYNJ2O15056 1496 aa19.04■□□□□ 0.64
RETREG3-208ENST00000589797 RAPGEF3O95398 923 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms