RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 RWDD1Q9H446 243 aaPredicted RBP18.53■□□□□ 0.56
SMARCA4-214ENST00000589677 RAB3GAP2Q9H2M9 1393 aa18.53■□□□□ 0.56
SMARCA4-214ENST00000589677 GOLGA6L4A6NEF3 574 aa18.53■□□□□ 0.56
SMARCA4-214ENST00000589677 ESF1Q9H501 851 aaKnown RBP18.53■□□□□ 0.56
SMARCA4-214ENST00000589677 TMF1P82094 1093 aa18.53■□□□□ 0.56
SMARCA4-214ENST00000589677 MCCP23508 829 aa18.53■□□□□ 0.56
SMARCA4-214ENST00000589677 SYAP1Q96A49 352 aaPredicted RBP18.53■□□□□ 0.56
SMARCA4-214ENST00000589677 AMER1Q5JTC6 1135 aaPredicted RBP18.52■□□□□ 0.56
SMARCA4-214ENST00000589677 DRC7Q8IY82 874 aa18.52■□□□□ 0.55
SMARCA4-214ENST00000589677 DDX11L8A8MPP1 907 aa18.5■□□□□ 0.55
SMARCA4-214ENST00000589677 PMFBP1Q8TBY8 1022 aa18.5■□□□□ 0.55
SMARCA4-214ENST00000589677 PLEKHD1A6NEE1 506 aa18.5■□□□□ 0.55
SMARCA4-214ENST00000589677 TNNT3P45378 269 aaPredicted RBP18.49■□□□□ 0.55
SMARCA4-214ENST00000589677 ARID3AQ99856 593 aa18.49■□□□□ 0.55
SMARCA4-214ENST00000589677 SOGA1O94964 1423 aa18.48■□□□□ 0.55
SMARCA4-214ENST00000589677 TOP2AP11388 1531 aaKnown RBP18.47■□□□□ 0.55
SMARCA4-214ENST00000589677 CFDP1Q9UEE9 299 aaPredicted RBP18.47■□□□□ 0.55
SMARCA4-214ENST00000589677 KCNH8Q96L42 1107 aa18.46■□□□□ 0.55
SMARCA4-214ENST00000589677 CALD1Q05682 793 aaKnown RBP18.46■□□□□ 0.55
SMARCA4-214ENST00000589677 CUX2O14529 1486 aa18.45■□□□□ 0.54
SMARCA4-214ENST00000589677 FAM161AQ3B820 660 aa18.45■□□□□ 0.54
SMARCA4-214ENST00000589677 ZBED9Q6R2W3 1325 aa18.45■□□□□ 0.54
SMARCA4-214ENST00000589677 CARMIL1Q5VZK9 1371 aa18.44■□□□□ 0.54
SMARCA4-214ENST00000589677 SKOR2Q2VWA4 1001 aaPredicted RBP18.42■□□□□ 0.54
SMARCA4-214ENST00000589677 CENPQQ7L2Z9 268 aaPredicted RBP18.42■□□□□ 0.54
SMARCA4-214ENST00000589677 DHX57Q6P158 1386 aaKnown RBP18.42■□□□□ 0.54
SMARCA4-214ENST00000589677 IPO8O15397 1037 aaKnown RBP18.42■□□□□ 0.54
SMARCA4-214ENST00000589677 ARHGAP35Q9NRY4 1499 aa18.41■□□□□ 0.54
SMARCA4-214ENST00000589677 KANK4Q5T7N3 995 aaPredicted RBP18.4■□□□□ 0.54
SMARCA4-214ENST00000589677 WIZO95785 1651 aa18.4■□□□□ 0.54
SMARCA4-214ENST00000589677 MFAP1P55081 439 aaKnown RBP18.39■□□□□ 0.53
SMARCA4-214ENST00000589677 DCAF11Q8TEB1 546 aa18.39■□□□□ 0.53
SMARCA4-214ENST00000589677 ABCC8Q09428 1581 aa18.38■□□□□ 0.53
SMARCA4-214ENST00000589677 ROCK2O75116 1388 aaKnown RBP18.37■□□□□ 0.53
SMARCA4-214ENST00000589677 ZBTB7CA1YPR0 619 aa18.37■□□□□ 0.53
SMARCA4-214ENST00000589677 KCNJ4P48050 445 aa18.37■□□□□ 0.53
SMARCA4-214ENST00000589677 PHLDB1Q86UU1 1377 aa18.37■□□□□ 0.53
SMARCA4-214ENST00000589677 GOLGA2Q08379 1002 aa18.36■□□□□ 0.53
SMARCA4-214ENST00000589677 FGD1P98174 961 aa18.35■□□□□ 0.53
SMARCA4-214ENST00000589677 PHF14O94880 888 aa18.35■□□□□ 0.53
SMARCA4-214ENST00000589677 NLRP13Q86W25 1043 aa18.35■□□□□ 0.53
SMARCA4-214ENST00000589677 PRKCSHP14314 528 aaPredicted RBP18.35■□□□□ 0.53
SMARCA4-214ENST00000589677 RRP1P56182 461 aaKnown RBP18.35■□□□□ 0.53
SMARCA4-214ENST00000589677 HAP1P54257 671 aaPredicted RBP18.34■□□□□ 0.53
SMARCA4-214ENST00000589677 U2SURPO15042 1029 aaKnown RBP18.34■□□□□ 0.53
SMARCA4-214ENST00000589677 SLC4A3P48751 1232 aa18.34■□□□□ 0.53
SMARCA4-214ENST00000589677 ANO8Q9HCE9 1232 aaPredicted RBP18.33■□□□□ 0.52
SMARCA4-214ENST00000589677 PDS5BQ9NTI5 1447 aa18.33■□□□□ 0.52
SMARCA4-214ENST00000589677 PKNOX2Q96KN3 472 aa18.32■□□□□ 0.52
SMARCA4-214ENST00000589677 HTATSF1O43719 755 aaKnown RBP18.31■□□□□ 0.52
SMARCA4-214ENST00000589677 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.31■□□□□ 0.52
SMARCA4-214ENST00000589677 CSPP1Q1MSJ5 1256 aa18.3■□□□□ 0.52
SMARCA4-214ENST00000589677 EXOC6Q8TAG9 804 aa18.3■□□□□ 0.52
SMARCA4-214ENST00000589677 MORC1Q86VD1 984 aa18.3■□□□□ 0.52
SMARCA4-214ENST00000589677 PRKRIP1Q9H875 184 aaPredicted RBP18.3■□□□□ 0.52
SMARCA4-214ENST00000589677 FMN1Q68DA7 1419 aa18.29■□□□□ 0.52
SMARCA4-214ENST00000589677 OS9Q13438 667 aaPredicted RBP18.29■□□□□ 0.52
SMARCA4-214ENST00000589677 MPHOSPH9Q99550 1183 aa18.29■□□□□ 0.52
SMARCA4-214ENST00000589677 SMARCA4P51532 1647 aa18.29■□□□□ 0.52
SMARCA4-214ENST00000589677 ITPRIPQ8IWB1 547 aa18.29■□□□□ 0.52
SMARCA4-214ENST00000589677 NFKBIBQ15653 356 aa18.28■□□□□ 0.52
SMARCA4-214ENST00000589677 FAM43AQ8N2R8 423 aa18.28■□□□□ 0.52
SMARCA4-214ENST00000589677 MAP7D2Q96T17 732 aa18.28■□□□□ 0.52
SMARCA4-214ENST00000589677 ATAD2BQ9ULI0 1458 aa18.27■□□□□ 0.52
SMARCA4-214ENST00000589677 KIF15Q9NS87 1388 aa18.27■□□□□ 0.52
SMARCA4-214ENST00000589677 DDX49Q9Y6V7 483 aaKnown RBP18.27■□□□□ 0.51
SMARCA4-214ENST00000589677 MYBBP1AQ9BQG0 1328 aaKnown RBP18.26■□□□□ 0.51
SMARCA4-214ENST00000589677 MTERF4Q7Z6M4 381 aaKnown RBP18.25■□□□□ 0.51
SMARCA4-214ENST00000589677 EIF4G1Q04637 1599 aaKnown RBP18.25■□□□□ 0.51
SMARCA4-214ENST00000589677 CENPJQ9HC77 1338 aaPredicted RBP18.25■□□□□ 0.51
SMARCA4-214ENST00000589677 KIAA1211Q6ZU35 1233 aa18.24■□□□□ 0.51
SMARCA4-214ENST00000589677 CHMP5Q9NZZ3 219 aa18.24■□□□□ 0.51
SMARCA4-214ENST00000589677 CADPSQ9ULU8 1353 aa18.24■□□□□ 0.51
SMARCA4-214ENST00000589677 L3MBTL2Q969R5 705 aa18.23■□□□□ 0.51
SMARCA4-214ENST00000589677 FAM13BQ9NYF5 915 aa18.23■□□□□ 0.51
SMARCA4-214ENST00000589677 ST18O60284 1047 aa18.23■□□□□ 0.51
SMARCA4-214ENST00000589677 TPM4P67936 248 aa18.23■□□□□ 0.51
SMARCA4-214ENST00000589677 GOLGA6L1Q8N7Z2 621 aa18.22■□□□□ 0.51
SMARCA4-214ENST00000589677 PKD2Q13563 968 aa18.21■□□□□ 0.51
SMARCA4-214ENST00000589677 TPM2P07951 284 aa18.21■□□□□ 0.51
SMARCA4-214ENST00000589677 PLPPR3Q6T4P5 718 aa18.21■□□□□ 0.51
SMARCA4-214ENST00000589677 ZNF771Q7L3S4 317 aaPredicted RBP18.21■□□□□ 0.51
SMARCA4-214ENST00000589677 CRBNQ96SW2 442 aa18.21■□□□□ 0.51
SMARCA4-214ENST00000589677 MRE11P49959 708 aa18.2■□□□□ 0.5
SMARCA4-214ENST00000589677 NAP1L2Q9ULW6 460 aaPredicted RBP18.2■□□□□ 0.5
SMARCA4-214ENST00000589677 IL27Q8NEV9 243 aa18.19■□□□□ 0.5
SMARCA4-214ENST00000589677 FOXD4L1Q9NU39 408 aa18.19■□□□□ 0.5
SMARCA4-214ENST00000589677 CGNL1Q0VF96 1302 aa18.19■□□□□ 0.5
SMARCA4-214ENST00000589677 FOXD1Q16676 465 aa18.18■□□□□ 0.5
SMARCA4-214ENST00000589677 TRHP20396 242 aaPredicted RBP18.18■□□□□ 0.5
SMARCA4-214ENST00000589677 SMC4Q9NTJ3 1288 aa18.17■□□□□ 0.5
SMARCA4-214ENST00000589677 BRPF3Q9ULD4 1205 aa18.16■□□□□ 0.5
SMARCA4-214ENST00000589677 POGKQ9P215 609 aa18.15■□□□□ 0.5
SMARCA4-214ENST00000589677 KIF16BQ96L93 1317 aa18.14■□□□□ 0.49
SMARCA4-214ENST00000589677 PLIN1O60240 522 aa18.14■□□□□ 0.49
SMARCA4-214ENST00000589677 U2AF1L5P0DN76 240 aaPredicted RBP18.13■□□□□ 0.49
SMARCA4-214ENST00000589677 U2AF1Q01081 240 aaKnown RBP eCLIP18.13■□□□□ 0.49
SMARCA4-214ENST00000589677 TDRD9Q8NDG6 1382 aaKnown RBP18.13■□□□□ 0.49
SMARCA4-214ENST00000589677 APBB1O00213 710 aa18.12■□□□□ 0.49
SMARCA4-214ENST00000589677 CLUAP1Q96AJ1 413 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms