RNA–Protein interactions for RNA: ENST00000588329.5

RAD23A-204, Transcript of RAD23 homolog A, nucleotide excision repair protein, humanhuman

TSL 5

Gene RAD23A, Length 1,034 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23A-204ENST00000588329 CCDC18Q5T9S5 1454 aa28.95■■■□□ 2.22
RAD23A-204ENST00000588329 ARHGAP5Q13017 1502 aa28.94■■■□□ 2.22
RAD23A-204ENST00000588329 YEATS2Q9ULM3 1422 aa28.94■■■□□ 2.22
RAD23A-204ENST00000588329 FYCO1Q9BQS8 1478 aa28.92■■■□□ 2.22
RAD23A-204ENST00000588329 LOC105371045A0A1W2PR82 267 aa28.92■■■□□ 2.22
RAD23A-204ENST00000588329 PTPRMP28827 1452 aa28.91■■■□□ 2.22
RAD23A-204ENST00000588329 ARHGEF40Q8TER5 1519 aa28.9■■■□□ 2.22
RAD23A-204ENST00000588329 POGZQ7Z3K3 1410 aa28.89■■■□□ 2.22
RAD23A-204ENST00000588329 MYT1LQ9UL68 1186 aa28.89■■■□□ 2.22
RAD23A-204ENST00000588329 PLPPR3Q6T4P5 718 aa28.88■■■□□ 2.21
RAD23A-204ENST00000588329 ZFYVE16Q7Z3T8 1539 aa28.88■■■□□ 2.21
RAD23A-204ENST00000588329 MLECQ14165 292 aa28.87■■■□□ 2.21
RAD23A-204ENST00000588329 AFAP1Q8N556 730 aa28.86■■■□□ 2.21
RAD23A-204ENST00000588329 ZMYM4Q5VZL5 1548 aa28.85■■■□□ 2.21
RAD23A-204ENST00000588329 CEP162Q5TB80 1403 aa28.85■■■□□ 2.21
RAD23A-204ENST00000588329 BCORL1Q5H9F3 1711 aa28.83■■■□□ 2.21
RAD23A-204ENST00000588329 ZNF777Q9ULD5 760 aaPredicted RBP28.83■■■□□ 2.21
RAD23A-204ENST00000588329 MADDQ8WXG6 1647 aa28.8■■■□□ 2.2
RAD23A-204ENST00000588329 CDC42BPBQ9Y5S2 1711 aa28.8■■■□□ 2.2
RAD23A-204ENST00000588329 MAGI2Q86UL8 1455 aa28.78■■■□□ 2.2
RAD23A-204ENST00000588329 SIGLEC1Q9BZZ2 1709 aa28.77■■■□□ 2.2
RAD23A-204ENST00000588329 PREX2Q70Z35 1606 aa28.75■■■□□ 2.19
RAD23A-204ENST00000588329 ZNF518AQ6AHZ1 1483 aa28.74■■■□□ 2.19
RAD23A-204ENST00000588329 MTUS2Q5JR59 1369 aa28.74■■■□□ 2.19
RAD23A-204ENST00000588329 LMTK3Q96Q04 1460 aa28.73■■■□□ 2.19
RAD23A-204ENST00000588329 TRAPPC8Q9Y2L5 1435 aa28.72■■■□□ 2.19
RAD23A-204ENST00000588329 ARHGEF12Q9NZN5 1544 aa28.72■■■□□ 2.19
RAD23A-204ENST00000588329 ATP10AO60312 1499 aa28.72■■■□□ 2.19
RAD23A-204ENST00000588329 RIMS1Q86UR5 1692 aaKnown RBP28.71■■■□□ 2.19
RAD23A-204ENST00000588329 CDC42BPAQ5VT25 1732 aa28.71■■■□□ 2.19
RAD23A-204ENST00000588329 ABCC1P33527 1531 aa28.68■■■□□ 2.18
RAD23A-204ENST00000588329 GPATCH8Q9UKJ3 1502 aaKnown RBP28.68■■■□□ 2.18
RAD23A-204ENST00000588329 C9orf84Q5VXU9 1444 aa28.68■■■□□ 2.18
RAD23A-204ENST00000588329 CCNB3Q8WWL7 1395 aa28.66■■■□□ 2.18
RAD23A-204ENST00000588329 HNRNPMP52272 730 aaKnown RBP eCLIP28.66■■■□□ 2.18
RAD23A-204ENST00000588329 CFDP1Q9UEE9 299 aaPredicted RBP28.66■■■□□ 2.18
RAD23A-204ENST00000588329 KDM5CP41229 1560 aa28.65■■■□□ 2.18
RAD23A-204ENST00000588329 ITSN2Q9NZM3 1697 aa28.62■■■□□ 2.17
RAD23A-204ENST00000588329 SAMD9LQ8IVG5 1584 aa28.6■■■□□ 2.17
RAD23A-204ENST00000588329 SYCP2Q9BX26 1530 aa28.59■■■□□ 2.17
RAD23A-204ENST00000588329 DIP2CQ9Y2E4 1556 aa28.58■■■□□ 2.17
RAD23A-204ENST00000588329 ABCA6Q8N139 1617 aa28.58■■■□□ 2.17
RAD23A-204ENST00000588329 MLH3Q9UHC1 1453 aa28.57■■■□□ 2.16
RAD23A-204ENST00000588329 CEBPAP49715 358 aaPredicted RBP28.56■■■□□ 2.16
RAD23A-204ENST00000588329 ZNF644Q9H582 1327 aaPredicted RBP28.56■■■□□ 2.16
RAD23A-204ENST00000588329 FER1L4A9Z1Z3 1794 aa28.55■■■□□ 2.16
RAD23A-204ENST00000588329 EHBP1L1Q8N3D4 1523 aa28.54■■■□□ 2.16
RAD23A-204ENST00000588329 SPAG9O60271 1321 aaKnown RBP28.53■■■□□ 2.16
RAD23A-204ENST00000588329 HSPA2P54652 639 aa28.52■■■□□ 2.16
RAD23A-204ENST00000588329 KIDINS220Q9ULH0 1771 aa28.5■■■□□ 2.15
RAD23A-204ENST00000588329 TIAM1Q13009 1591 aa28.5■■■□□ 2.15
RAD23A-204ENST00000588329 VPS8Q8N3P4 1428 aa28.48■■■□□ 2.15
RAD23A-204ENST00000588329 ESF1Q9H501 851 aaKnown RBP28.45■■■□□ 2.14
RAD23A-204ENST00000588329 PLEKHH2Q8IVE3 1493 aa28.45■■■□□ 2.14
RAD23A-204ENST00000588329 KIAA1107Q9UPP5 1409 aa28.44■■■□□ 2.14
RAD23A-204ENST00000588329 NCOA2Q15596 1464 aa28.44■■■□□ 2.14
RAD23A-204ENST00000588329 REREQ9P2R6 1566 aa28.41■■■□□ 2.14
RAD23A-204ENST00000588329 CERKQ8TCT0 537 aa28.41■■■□□ 2.14
RAD23A-204ENST00000588329 KANK4Q5T7N3 995 aaPredicted RBP28.4■■■□□ 2.14
RAD23A-204ENST00000588329 ATP7AQ04656 1500 aa28.39■■■□□ 2.14
RAD23A-204ENST00000588329 SUPT6HQ7KZ85 1726 aaKnown RBP28.38■■■□□ 2.13
RAD23A-204ENST00000588329 AGLP35573 1532 aa28.37■■■□□ 2.13
RAD23A-204ENST00000588329 LRRC9Q6ZRR7 1453 aa28.34■■■□□ 2.13
RAD23A-204ENST00000588329 MBD5Q9P267 1494 aa28.34■■■□□ 2.13
RAD23A-204ENST00000588329 INO80Q9ULG1 1556 aaPredicted RBP28.33■■■□□ 2.12
RAD23A-204ENST00000588329 GGT6Q6P531 493 aa28.32■■■□□ 2.12
RAD23A-204ENST00000588329 A2MP01023 1474 aa28.31■■■□□ 2.12
RAD23A-204ENST00000588329 PREX1Q8TCU6 1659 aa28.3■■■□□ 2.12
RAD23A-204ENST00000588329 CAMSAP2Q08AD1 1489 aa28.3■■■□□ 2.12
RAD23A-204ENST00000588329 APLP2Q06481 763 aa28.26■■■□□ 2.11
RAD23A-204ENST00000588329 C3P01024 1663 aa28.26■■■□□ 2.11
RAD23A-204ENST00000588329 ILDR2Q71H61 639 aa28.25■■■□□ 2.11
RAD23A-204ENST00000588329 STRCQ7RTU9 1775 aa28.24■■■□□ 2.11
RAD23A-204ENST00000588329 CCDC141Q6ZP82 1450 aa28.23■■■□□ 2.11
RAD23A-204ENST00000588329 DISP3Q9P2K9 1392 aa28.23■■■□□ 2.11
RAD23A-204ENST00000588329 UHRF1BP1Q6BDS2 1440 aa28.22■■■□□ 2.11
RAD23A-204ENST00000588329 PLXNC1O60486 1568 aa28.21■■■□□ 2.11
RAD23A-204ENST00000588329 CNTLNQ9NXG0 1405 aa28.21■■■□□ 2.11
RAD23A-204ENST00000588329 ZMYM3Q14202 1370 aa28.19■■■□□ 2.1
RAD23A-204ENST00000588329 RTEL1-TNFRSF6BF6WH68 1400 aa28.18■■■□□ 2.1
RAD23A-204ENST00000588329 TSPY4P0CV99 314 aa28.18■■■□□ 2.1
RAD23A-204ENST00000588329 TSPY10P0CW01 314 aa28.18■■■□□ 2.1
RAD23A-204ENST00000588329 MAP3K1Q13233 1512 aa28.18■■■□□ 2.1
RAD23A-204ENST00000588329 ADGBQ8N7X0 1667 aa28.17■■■□□ 2.1
RAD23A-204ENST00000588329 KIF3BO15066 747 aa28.17■■■□□ 2.1
RAD23A-204ENST00000588329 RSPH4AQ5TD94 716 aa28.16■■■□□ 2.1
RAD23A-204ENST00000588329 CLTCQ00610 1675 aaKnown RBP28.16■■■□□ 2.1
RAD23A-204ENST00000588329 DHX29Q7Z478 1369 aaKnown RBP28.15■■■□□ 2.1
RAD23A-204ENST00000588329 SOCS7O14512 581 aa28.14■■■□□ 2.1
RAD23A-204ENST00000588329 MYOM3Q5VTT5 1437 aa28.13■■■□□ 2.09
RAD23A-204ENST00000588329 SETD1BQ9UPS6 1966 aaKnown RBP28.12■■■□□ 2.09
RAD23A-204ENST00000588329 SPATA31D1Q6ZQQ2 1576 aa28.11■■■□□ 2.09
RAD23A-204ENST00000588329 ARHGEF5Q12774 1597 aa28.09■■■□□ 2.09
RAD23A-204ENST00000588329 MROH2AA6NES4 1674 aa28.07■■■□□ 2.08
RAD23A-204ENST00000588329 MIA2Q96PC5 1412 aa28.05■■■□□ 2.08
RAD23A-204ENST00000588329 NPATQ14207 1427 aa28.02■■■□□ 2.08
RAD23A-204ENST00000588329 PPP6R1Q9UPN7 881 aa28.02■■■□□ 2.08
RAD23A-204ENST00000588329 PTPRKQ15262 1439 aa28.01■■■□□ 2.08
RAD23A-204ENST00000588329 WASHC2CQ9Y4E1 1318 aa28.01■■■□□ 2.07
RAD23A-204ENST00000588329 DMRT2Q9Y5R5 561 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms