RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 MFRPQ9BY79 579 aa8.28□□□□□ -1.08
LINC01538-201ENST00000588074 ERICH6BQ5W0A0 696 aa8.27□□□□□ -1.09
LINC01538-201ENST00000588074 TRAK2O60296 914 aa8.26□□□□□ -1.09
LINC01538-201ENST00000588074 MLLT3P42568 568 aaPredicted RBP8.25□□□□□ -1.09
LINC01538-201ENST00000588074 GPIHBP1Q8IV16 184 aa8.25□□□□□ -1.09
LINC01538-201ENST00000588074 MYT1LQ9UL68 1186 aa8.24□□□□□ -1.09
LINC01538-201ENST00000588074 TRAIPQ9BWF2 469 aa8.23□□□□□ -1.09
LINC01538-201ENST00000588074 MNX1P50219 401 aaPredicted RBP8.23□□□□□ -1.09
LINC01538-201ENST00000588074 NCKAP5LQ9HCH0 1330 aa8.23□□□□□ -1.09
LINC01538-201ENST00000588074 CACNB1Q02641 598 aaPredicted RBP8.22□□□□□ -1.09
LINC01538-201ENST00000588074 FLIIQ13045 1269 aa8.22□□□□□ -1.09
LINC01538-201ENST00000588074 SMYD5Q6GMV2 418 aa8.22□□□□□ -1.09
LINC01538-201ENST00000588074 RBM25P49756 843 aaKnown RBP8.21□□□□□ -1.09
LINC01538-201ENST00000588074 ZNF777Q9ULD5 760 aaPredicted RBP8.21□□□□□ -1.1
LINC01538-201ENST00000588074 CCDC180Q9P1Z9 1646 aa8.2□□□□□ -1.1
LINC01538-201ENST00000588074 SHROOM4Q9ULL8 1493 aa8.19□□□□□ -1.1
LINC01538-201ENST00000588074 A6NJR5 290 aa8.19□□□□□ -1.1
LINC01538-201ENST00000588074 NEFLP07196 543 aa8.19□□□□□ -1.1
LINC01538-201ENST00000588074 MFAP1P55081 439 aaKnown RBP8.19□□□□□ -1.1
LINC01538-201ENST00000588074 CLSPNQ9HAW4 1339 aa8.19□□□□□ -1.1
LINC01538-201ENST00000588074 GZF1Q9H116 711 aaPredicted RBP8.18□□□□□ -1.1
LINC01538-201ENST00000588074 TMCO4Q5TGY1 634 aa8.18□□□□□ -1.1
LINC01538-201ENST00000588074 RETREG2Q8NC44 543 aa8.17□□□□□ -1.1
LINC01538-201ENST00000588074 IRF5Q13568 498 aa8.17□□□□□ -1.1
LINC01538-201ENST00000588074 LARP6Q9BRS8 491 aaKnown RBP8.15□□□□□ -1.1
LINC01538-201ENST00000588074 DCAF1Q9Y4B6 1507 aa8.15□□□□□ -1.1
LINC01538-201ENST00000588074 CREBZFQ9NS37 354 aa8.15□□□□□ -1.1
LINC01538-201ENST00000588074 POM121Q96HA1 1249 aa8.14□□□□□ -1.11
LINC01538-201ENST00000588074 GPR37O15354 613 aa8.13□□□□□ -1.11
LINC01538-201ENST00000588074 MCM6Q14566 821 aa8.13□□□□□ -1.11
LINC01538-201ENST00000588074 PARP9Q8IXQ6 854 aa8.13□□□□□ -1.11
LINC01538-201ENST00000588074 FBXO22Q8NEZ5 403 aa8.12□□□□□ -1.11
LINC01538-201ENST00000588074 DDRGK1Q96HY6 314 aa8.12□□□□□ -1.11
LINC01538-201ENST00000588074 RNF39Q9H2S5 420 aa8.11□□□□□ -1.11
LINC01538-201ENST00000588074 PCDHB8Q9UN66 801 aa8.11□□□□□ -1.11
LINC01538-201ENST00000588074 SALL2Q9Y467 1007 aaPredicted RBP8.11□□□□□ -1.11
LINC01538-201ENST00000588074 PCDHB13Q9Y5F0 798 aa8.11□□□□□ -1.11
LINC01538-201ENST00000588074 MYO15BQ96JP2 1530 aa8.11□□□□□ -1.11
LINC01538-201ENST00000588074 ARIH1Q9Y4X5 557 aaPredicted RBP8.1□□□□□ -1.11
LINC01538-201ENST00000588074 FNBP4Q8N3X1 1017 aaPredicted RBP8.1□□□□□ -1.11
LINC01538-201ENST00000588074 DSG3P32926 999 aa8.09□□□□□ -1.11
LINC01538-201ENST00000588074 PROSER2Q86WR7 435 aaPredicted RBP8.09□□□□□ -1.11
LINC01538-201ENST00000588074 MFSD10Q14728 455 aa8.08□□□□□ -1.12
LINC01538-201ENST00000588074 CCDC102AQ96A19 550 aa8.08□□□□□ -1.12
LINC01538-201ENST00000588074 PHF8Q9UPP1 1060 aa8.08□□□□□ -1.12
LINC01538-201ENST00000588074 PDE4CQ08493 712 aa8.07□□□□□ -1.12
LINC01538-201ENST00000588074 PDAP1Q13442 181 aaKnown RBP8.07□□□□□ -1.12
LINC01538-201ENST00000588074 CAMK2BQ13554 666 aa8.06□□□□□ -1.12
LINC01538-201ENST00000588074 CCDC97Q96F63 343 aaPredicted RBP8.06□□□□□ -1.12
LINC01538-201ENST00000588074 DDX27Q96GQ7 796 aaKnown RBP8.05□□□□□ -1.12
LINC01538-201ENST00000588074 CRISPLD2Q9H0B8 497 aa8.05□□□□□ -1.12
LINC01538-201ENST00000588074 EFCAB3Q8N7B9 438 aa8.04□□□□□ -1.12
LINC01538-201ENST00000588074 SERPINA10Q9UK55 444 aa8.04□□□□□ -1.12
LINC01538-201ENST00000588074 AMHR2Q16671 573 aa8.03□□□□□ -1.12
LINC01538-201ENST00000588074 FBXW7Q969H0 707 aa8.03□□□□□ -1.12
LINC01538-201ENST00000588074 PLSCR2Q9NRY7 297 aa8.02□□□□□ -1.13
LINC01538-201ENST00000588074 MS4A1P11836 297 aa8.02□□□□□ -1.13
LINC01538-201ENST00000588074 ZNF467Q7Z7K2 595 aaPredicted RBP8.02□□□□□ -1.13
LINC01538-201ENST00000588074 PSEN1P49768 467 aa8.01□□□□□ -1.13
LINC01538-201ENST00000588074 GOPCQ9HD26 462 aa8.01□□□□□ -1.13
LINC01538-201ENST00000588074 FECHP22830 423 aa8.01□□□□□ -1.13
LINC01538-201ENST00000588074 PDE4AP27815 886 aa8.01□□□□□ -1.13
LINC01538-201ENST00000588074 CCDC136Q96JN2 1154 aa8□□□□□ -1.13
LINC01538-201ENST00000588074 E9PSI1 815 aa8□□□□□ -1.13
LINC01538-201ENST00000588074 CDK11BP21127 795 aaKnown RBP8□□□□□ -1.13
LINC01538-201ENST00000588074 CDK11AQ9UQ88 783 aaPredicted RBP8□□□□□ -1.13
LINC01538-201ENST00000588074 IRF6O14896 467 aa7.99□□□□□ -1.13
LINC01538-201ENST00000588074 MINK1Q8N4C8 1332 aaPredicted RBP7.99□□□□□ -1.13
LINC01538-201ENST00000588074 GLIPR1L2Q4G1C9 344 aa7.99□□□□□ -1.13
LINC01538-201ENST00000588074 REPIN1Q9BWE0 567 aaKnown RBP7.99□□□□□ -1.13
LINC01538-201ENST00000588074 DPYSL4O14531 572 aa7.98□□□□□ -1.13
LINC01538-201ENST00000588074 FGD1P98174 961 aa7.98□□□□□ -1.13
LINC01538-201ENST00000588074 MAP2K5Q13163 448 aa7.98□□□□□ -1.13
LINC01538-201ENST00000588074 NLRP6P59044 892 aa7.98□□□□□ -1.13
LINC01538-201ENST00000588074 PCMTD1Q96MG8 357 aaPredicted RBP7.98□□□□□ -1.13
LINC01538-201ENST00000588074 TTLL12Q14166 644 aaPredicted RBP7.97□□□□□ -1.13
LINC01538-201ENST00000588074 MS4A4AQ96JQ5 239 aa7.97□□□□□ -1.13
LINC01538-201ENST00000588074 CABP2Q9NPB3 220 aa7.97□□□□□ -1.13
LINC01538-201ENST00000588074 HSP90B1P14625 803 aaKnown RBP7.97□□□□□ -1.13
LINC01538-201ENST00000588074 TAF7LQ5H9L4 462 aa7.97□□□□□ -1.13
LINC01538-201ENST00000588074 USP35Q9P2H5 1018 aa7.97□□□□□ -1.13
LINC01538-201ENST00000588074 TSPYL2Q9H2G4 693 aaPredicted RBP7.96□□□□□ -1.14
LINC01538-201ENST00000588074 OXER1Q8TDS5 423 aa7.95□□□□□ -1.14
LINC01538-201ENST00000588074 EMILIN3Q9NT22 766 aa7.95□□□□□ -1.14
LINC01538-201ENST00000588074 CARNS1A5YM72 827 aa7.95□□□□□ -1.14
LINC01538-201ENST00000588074 GIGYF2Q6Y7W6 1299 aaKnown RBP7.95□□□□□ -1.14
LINC01538-201ENST00000588074 CLEC11AQ9Y240 323 aa7.95□□□□□ -1.14
LINC01538-201ENST00000588074 COG6Q9Y2V7 657 aa7.95□□□□□ -1.14
LINC01538-201ENST00000588074 DEKP35659 375 aaKnown RBP7.94□□□□□ -1.14
LINC01538-201ENST00000588074 C1QBPQ07021 282 aaKnown RBP7.94□□□□□ -1.14
LINC01538-201ENST00000588074 DIEXFQ68CQ4 756 aaKnown RBP7.94□□□□□ -1.14
LINC01538-201ENST00000588074 PUS7Q96PZ0 661 aaKnown RBP7.94□□□□□ -1.14
LINC01538-201ENST00000588074 PRR29P0C7W0 189 aa7.93□□□□□ -1.14
LINC01538-201ENST00000588074 CHMP4AQ9BY43 222 aa7.92□□□□□ -1.14
LINC01538-201ENST00000588074 PROCA1Q8NCQ7 364 aaPredicted RBP7.92□□□□□ -1.14
LINC01538-201ENST00000588074 NUTM2FA1L443 756 aa7.91□□□□□ -1.14
LINC01538-201ENST00000588074 PDIA6Q15084 440 aa7.91□□□□□ -1.14
LINC01538-201ENST00000588074 ZNF330Q9Y3S2 320 aaPredicted RBP7.9□□□□□ -1.14
LINC01538-201ENST00000588074 SUPT16HQ9Y5B9 1047 aaKnown RBP7.9□□□□□ -1.14
LINC01538-201ENST00000588074 SOX12O15370 315 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms