RNA–Protein interactions for RNA: ENST00000587263.5

RANBP3-208, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-208ENST00000587263 DISP3Q9P2K9 1392 aa24.9■■□□□ 1.58
RANBP3-208ENST00000587263 RANGAP1P46060 587 aaPredicted RBP24.89■■□□□ 1.58
RANBP3-208ENST00000587263 SCAPERQ9BY12 1400 aa24.88■■□□□ 1.57
RANBP3-208ENST00000587263 ATP10AO60312 1499 aa24.86■■□□□ 1.57
RANBP3-208ENST00000587263 DMRT2Q9Y5R5 561 aa24.86■■□□□ 1.57
RANBP3-208ENST00000587263 C9orf84Q5VXU9 1444 aa24.86■■□□□ 1.57
RANBP3-208ENST00000587263 PLCH2O75038 1416 aa24.85■■□□□ 1.57
RANBP3-208ENST00000587263 SOCS7O14512 581 aa24.84■■□□□ 1.57
RANBP3-208ENST00000587263 ILDR2Q71H61 639 aa24.82■■□□□ 1.56
RANBP3-208ENST00000587263 CDK13Q14004 1512 aaKnown RBP24.81■■□□□ 1.56
RANBP3-208ENST00000587263 EEA1Q15075 1411 aa24.8■■□□□ 1.56
RANBP3-208ENST00000587263 UHRF1BP1Q6BDS2 1440 aa24.79■■□□□ 1.56
RANBP3-208ENST00000587263 CEBPAP49715 358 aaPredicted RBP24.77■■□□□ 1.56
RANBP3-208ENST00000587263 STRCQ7RTU9 1775 aa24.76■■□□□ 1.55
RANBP3-208ENST00000587263 EFCAB2Q5VUJ9 269 aa24.76■■□□□ 1.55
RANBP3-208ENST00000587263 ZNF518AQ6AHZ1 1483 aa24.74■■□□□ 1.55
RANBP3-208ENST00000587263 MYO5CQ9NQX4 1742 aa24.74■■□□□ 1.55
RANBP3-208ENST00000587263 SPATA31D1Q6ZQQ2 1576 aa24.72■■□□□ 1.55
RANBP3-208ENST00000587263 PTPRTO14522 1441 aa24.7■■□□□ 1.55
RANBP3-208ENST00000587263 SETD1BQ9UPS6 1966 aaKnown RBP24.69■■□□□ 1.54
RANBP3-208ENST00000587263 KDM5CP41229 1560 aa24.68■■□□□ 1.54
RANBP3-208ENST00000587263 CDK11AQ9UQ88 783 aaPredicted RBP24.66■■□□□ 1.54
RANBP3-208ENST00000587263 REREQ9P2R6 1566 aa24.66■■□□□ 1.54
RANBP3-208ENST00000587263 DIP2CQ9Y2E4 1556 aa24.64■■□□□ 1.54
RANBP3-208ENST00000587263 MYT1LQ9UL68 1186 aa24.64■■□□□ 1.54
RANBP3-208ENST00000587263 ARHGAP5Q13017 1502 aa24.64■■□□□ 1.53
RANBP3-208ENST00000587263 KIF14Q15058 1648 aa24.64■■□□□ 1.53
RANBP3-208ENST00000587263 FMN1Q68DA7 1419 aa24.62■■□□□ 1.53
RANBP3-208ENST00000587263 AFAP1Q8N556 730 aa24.62■■□□□ 1.53
RANBP3-208ENST00000587263 ATP1B4Q9UN42 357 aaPredicted RBP24.62■■□□□ 1.53
RANBP3-208ENST00000587263 IQSEC2Q5JU85 1478 aa24.62■■□□□ 1.53
RANBP3-208ENST00000587263 C3P01024 1663 aa24.6■■□□□ 1.53
RANBP3-208ENST00000587263 ESF1Q9H501 851 aaKnown RBP24.6■■□□□ 1.53
RANBP3-208ENST00000587263 LTBP4Q8N2S1 1624 aa24.59■■□□□ 1.53
RANBP3-208ENST00000587263 TROQ12816 1431 aaPredicted RBP24.59■■□□□ 1.53
RANBP3-208ENST00000587263 CLIP1P30622 1438 aa24.58■■□□□ 1.53
RANBP3-208ENST00000587263 TRAPPC8Q9Y2L5 1435 aa24.58■■□□□ 1.53
RANBP3-208ENST00000587263 MLH3Q9UHC1 1453 aa24.58■■□□□ 1.52
RANBP3-208ENST00000587263 AGLP35573 1532 aa24.57■■□□□ 1.52
RANBP3-208ENST00000587263 ABCA6Q8N139 1617 aa24.57■■□□□ 1.52
RANBP3-208ENST00000587263 NCOA1Q15788 1441 aa24.54■■□□□ 1.52
RANBP3-208ENST00000587263 CNTLNQ9NXG0 1405 aa24.52■■□□□ 1.52
RANBP3-208ENST00000587263 ARHGAP35Q9NRY4 1499 aa24.49■■□□□ 1.51
RANBP3-208ENST00000587263 ABCC1P33527 1531 aa24.47■■□□□ 1.51
RANBP3-208ENST00000587263 CDC42BPBQ9Y5S2 1711 aa24.47■■□□□ 1.51
RANBP3-208ENST00000587263 PREX2Q70Z35 1606 aa24.46■■□□□ 1.51
RANBP3-208ENST00000587263 NPATQ14207 1427 aa24.44■■□□□ 1.5
RANBP3-208ENST00000587263 CAMSAP1Q5T5Y3 1602 aa24.44■■□□□ 1.5
RANBP3-208ENST00000587263 UBTFP17480 764 aaKnown RBP24.44■■□□□ 1.5
RANBP3-208ENST00000587263 ITSN2Q9NZM3 1697 aa24.43■■□□□ 1.5
RANBP3-208ENST00000587263 MROH2AA6NES4 1674 aa24.42■■□□□ 1.5
RANBP3-208ENST00000587263 KIDINS220Q9ULH0 1771 aa24.41■■□□□ 1.5
RANBP3-208ENST00000587263 LRRIQ1Q96JM4 1722 aa24.38■■□□□ 1.49
RANBP3-208ENST00000587263 UBAP1LF5GYI3 381 aa24.38■■□□□ 1.49
RANBP3-208ENST00000587263 ZNF335Q9H4Z2 1342 aaPredicted RBP24.35■■□□□ 1.49
RANBP3-208ENST00000587263 ZMYM3Q14202 1370 aa24.35■■□□□ 1.49
RANBP3-208ENST00000587263 PLA2R1Q13018 1463 aa24.34■■□□□ 1.49
RANBP3-208ENST00000587263 CCDC18Q5T9S5 1454 aa24.34■■□□□ 1.49
RANBP3-208ENST00000587263 EHMT2Q96KQ7 1210 aa24.34■■□□□ 1.49
RANBP3-208ENST00000587263 NCKAP5LQ9HCH0 1330 aa24.34■■□□□ 1.49
RANBP3-208ENST00000587263 SAMD9LQ8IVG5 1584 aa24.33■■□□□ 1.48
RANBP3-208ENST00000587263 PKD2Q13563 968 aa24.32■■□□□ 1.48
RANBP3-208ENST00000587263 ZNF142P52746 1687 aaPredicted RBP24.31■■□□□ 1.48
RANBP3-208ENST00000587263 MYO3AQ8NEV4 1616 aa24.3■■□□□ 1.48
RANBP3-208ENST00000587263 CDC42BPAQ5VT25 1732 aa24.3■■□□□ 1.48
RANBP3-208ENST00000587263 TCOF1Q13428 1488 aaKnown RBP24.28■■□□□ 1.48
RANBP3-208ENST00000587263 CEP170BQ9Y4F5 1589 aaPredicted RBP24.27■■□□□ 1.48
RANBP3-208ENST00000587263 SPAG9O60271 1321 aaKnown RBP24.27■■□□□ 1.48
RANBP3-208ENST00000587263 CASKIN1Q8WXD9 1431 aa24.27■■□□□ 1.48
RANBP3-208ENST00000587263 SYCP2Q9BX26 1530 aa24.25■■□□□ 1.47
RANBP3-208ENST00000587263 CLTCQ00610 1675 aaKnown RBP24.25■■□□□ 1.47
RANBP3-208ENST00000587263 SUPT6HQ7KZ85 1726 aaKnown RBP24.25■■□□□ 1.47
RANBP3-208ENST00000587263 ZNF777Q9ULD5 760 aaPredicted RBP24.24■■□□□ 1.47
RANBP3-208ENST00000587263 PPP6R1Q9UPN7 881 aa24.23■■□□□ 1.47
RANBP3-208ENST00000587263 PTPRKQ15262 1439 aa24.23■■□□□ 1.47
RANBP3-208ENST00000587263 ATP7AQ04656 1500 aa24.23■■□□□ 1.47
RANBP3-208ENST00000587263 PLXNC1O60486 1568 aa24.23■■□□□ 1.47
RANBP3-208ENST00000587263 A2MP01023 1474 aa24.21■■□□□ 1.47
RANBP3-208ENST00000587263 INO80Q9ULG1 1556 aaPredicted RBP24.19■■□□□ 1.46
RANBP3-208ENST00000587263 GPATCH8Q9UKJ3 1502 aaKnown RBP24.18■■□□□ 1.46
RANBP3-208ENST00000587263 PLEKHH2Q8IVE3 1493 aa24.18■■□□□ 1.46
RANBP3-208ENST00000587263 HNRNPMP52272 730 aaKnown RBP eCLIP24.17■■□□□ 1.467e-7■■■□□ 15.5
RANBP3-208ENST00000587263 KIAA1107Q9UPP5 1409 aa24.17■■□□□ 1.46
RANBP3-208ENST00000587263 MED1Q15648 1581 aaPredicted RBP24.16■■□□□ 1.46
RANBP3-208ENST00000587263 FYCO1Q9BQS8 1478 aa24.16■■□□□ 1.46
RANBP3-208ENST00000587263 GGT6Q6P531 493 aa24.16■■□□□ 1.46
RANBP3-208ENST00000587263 SCAF1Q9H7N4 1312 aaKnown RBP24.14■■□□□ 1.46
RANBP3-208ENST00000587263 A2ML1A8K2U0 1454 aa24.14■■□□□ 1.46
RANBP3-208ENST00000587263 CPS1P31327 1500 aa24.13■■□□□ 1.45
RANBP3-208ENST00000587263 TOM1O60784 492 aa24.12■■□□□ 1.45
RANBP3-208ENST00000587263 HSPA1LP34931 641 aa24.12■■□□□ 1.45
RANBP3-208ENST00000587263 DNMT1P26358 1616 aaKnown RBP24.1■■□□□ 1.45
RANBP3-208ENST00000587263 PIP4K2BP78356 416 aa24.1■■□□□ 1.45
RANBP3-208ENST00000587263 CFDP1Q9UEE9 299 aaPredicted RBP24.1■■□□□ 1.45
RANBP3-208ENST00000587263 ADGBQ8N7X0 1667 aa24.09■■□□□ 1.45
RANBP3-208ENST00000587263 POLR1AO95602 1720 aaPredicted RBP24.07■■□□□ 1.44
RANBP3-208ENST00000587263 CCNB3Q8WWL7 1395 aa24.06■■□□□ 1.44
RANBP3-208ENST00000587263 SHANK2Q9UPX8 1470 aa24.06■■□□□ 1.44
RANBP3-208ENST00000587263 NEURL4Q96JN8 1562 aa24.04■■□□□ 1.44
RANBP3-208ENST00000587263 TNRQ92752 1358 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms