RNA–Protein interactions for RNA: ENST00000586993.5

DDX39A-205, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-205ENST00000586993 ARHGAP5Q13017 1502 aa35.56■■■■□ 3.28
DDX39A-205ENST00000586993 CDC42BPAQ5VT25 1732 aa35.54■■■■□ 3.28
DDX39A-205ENST00000586993 EFCAB2Q5VUJ9 269 aa35.53■■■■□ 3.28
DDX39A-205ENST00000586993 MTUS2Q5JR59 1369 aa35.51■■■■□ 3.27
DDX39A-205ENST00000586993 SCAPERQ9BY12 1400 aa35.49■■■■□ 3.27
DDX39A-205ENST00000586993 EHBP1L1Q8N3D4 1523 aa35.48■■■■□ 3.27
DDX39A-205ENST00000586993 POGZQ7Z3K3 1410 aa35.47■■■■□ 3.27
DDX39A-205ENST00000586993 TIAM1Q13009 1591 aa35.47■■■■□ 3.27
DDX39A-205ENST00000586993 ZMYM4Q5VZL5 1548 aa35.46■■■■□ 3.27
DDX39A-205ENST00000586993 GPATCH8Q9UKJ3 1502 aaKnown RBP35.43■■■■□ 3.26
DDX39A-205ENST00000586993 ARHGEF40Q8TER5 1519 aa35.42■■■■□ 3.26
DDX39A-205ENST00000586993 ABCC1P33527 1531 aa35.37■■■■□ 3.25
DDX39A-205ENST00000586993 ARHGEF12Q9NZN5 1544 aa35.36■■■■□ 3.25
DDX39A-205ENST00000586993 YEATS2Q9ULM3 1422 aa35.34■■■■□ 3.25
DDX39A-205ENST00000586993 SAMD9LQ8IVG5 1584 aa35.34■■■■□ 3.25
DDX39A-205ENST00000586993 ZFYVE16Q7Z3T8 1539 aa35.33■■■■□ 3.25
DDX39A-205ENST00000586993 CCNB3Q8WWL7 1395 aa35.33■■■■□ 3.25
DDX39A-205ENST00000586993 ITSN2Q9NZM3 1697 aa35.33■■■■□ 3.25
DDX39A-205ENST00000586993 KDM5CP41229 1560 aa35.31■■■■□ 3.24
DDX39A-205ENST00000586993 ZNF518AQ6AHZ1 1483 aa35.3■■■■□ 3.24
DDX39A-205ENST00000586993 MAGI2Q86UL8 1455 aa35.3■■■■□ 3.24
DDX39A-205ENST00000586993 SUPT6HQ7KZ85 1726 aaKnown RBP35.29■■■■□ 3.24
DDX39A-205ENST00000586993 MAP3K1Q13233 1512 aa35.29■■■■□ 3.24
DDX39A-205ENST00000586993 LRRC9Q6ZRR7 1453 aa35.29■■■■□ 3.24
DDX39A-205ENST00000586993 TRAPPC8Q9Y2L5 1435 aa35.28■■■■□ 3.24
DDX39A-205ENST00000586993 NCOA2Q15596 1464 aa35.28■■■■□ 3.24
DDX39A-205ENST00000586993 AFAP1Q8N556 730 aa35.27■■■■□ 3.24
DDX39A-205ENST00000586993 SIGLEC1Q9BZZ2 1709 aa35.26■■■■□ 3.23
DDX39A-205ENST00000586993 ZNF777Q9ULD5 760 aaPredicted RBP35.25■■■■□ 3.23
DDX39A-205ENST00000586993 SYCP2Q9BX26 1530 aa35.23■■■■□ 3.23
DDX39A-205ENST00000586993 CFDP1Q9UEE9 299 aaPredicted RBP35.23■■■■□ 3.23
DDX39A-205ENST00000586993 KANK4Q5T7N3 995 aaPredicted RBP35.22■■■■□ 3.23
DDX39A-205ENST00000586993 HECW2Q9P2P5 1572 aa35.21■■■■□ 3.23
DDX39A-205ENST00000586993 BCORL1Q5H9F3 1711 aa35.16■■■■□ 3.22
DDX39A-205ENST00000586993 ADAMTSL3P82987 1691 aa35.15■■■■□ 3.22
DDX39A-205ENST00000586993 ZNF644Q9H582 1327 aaPredicted RBP35.14■■■■□ 3.22
DDX39A-205ENST00000586993 PLEKHH2Q8IVE3 1493 aa35.14■■■■□ 3.22
DDX39A-205ENST00000586993 MLH3Q9UHC1 1453 aa35.14■■■■□ 3.22
DDX39A-205ENST00000586993 KIAA1107Q9UPP5 1409 aa35.14■■■■□ 3.22
DDX39A-205ENST00000586993 ATP10AO60312 1499 aa35.13■■■■□ 3.21
DDX39A-205ENST00000586993 ABCA6Q8N139 1617 aa35.13■■■■□ 3.21
DDX39A-205ENST00000586993 DIP2CQ9Y2E4 1556 aa35.13■■■■□ 3.21
DDX39A-205ENST00000586993 ARID4BQ4LE39 1312 aaPredicted RBP35.12■■■■□ 3.21
DDX39A-205ENST00000586993 HNRNPMP52272 730 aaKnown RBP eCLIP35.12■■■■□ 3.214e-15■■■■□ 20.6
DDX39A-205ENST00000586993 KIDINS220Q9ULH0 1771 aa35.1■■■■□ 3.21
DDX39A-205ENST00000586993 C9orf84Q5VXU9 1444 aa35.09■■■■□ 3.21
DDX39A-205ENST00000586993 MADDQ8WXG6 1647 aa35.05■■■■□ 3.2
DDX39A-205ENST00000586993 MBD5Q9P267 1494 aa35.04■■■■□ 3.2
DDX39A-205ENST00000586993 CAMSAP2Q08AD1 1489 aa35.03■■■■□ 3.2
DDX39A-205ENST00000586993 MYT1LQ9UL68 1186 aa35.03■■■■□ 3.2
DDX39A-205ENST00000586993 APLP2Q06481 763 aa35.01■■■■□ 3.2
DDX39A-205ENST00000586993 REREQ9P2R6 1566 aa35■■■■□ 3.19
DDX39A-205ENST00000586993 INO80Q9ULG1 1556 aaPredicted RBP35■■■■□ 3.19
DDX39A-205ENST00000586993 SPAG9O60271 1321 aaKnown RBP34.98■■■■□ 3.19
DDX39A-205ENST00000586993 ATP7AQ04656 1500 aa34.97■■■■□ 3.19
DDX39A-205ENST00000586993 PTPRMP28827 1452 aa34.97■■■■□ 3.19
DDX39A-205ENST00000586993 MYOM3Q5VTT5 1437 aa34.95■■■■□ 3.19
DDX39A-205ENST00000586993 RIMS1Q86UR5 1692 aaKnown RBP34.93■■■■□ 3.18
DDX39A-205ENST00000586993 MLECQ14165 292 aa34.92■■■■□ 3.18
DDX39A-205ENST00000586993 CCDC141Q6ZP82 1450 aa34.89■■■■□ 3.18
DDX39A-205ENST00000586993 FER1L4A9Z1Z3 1794 aa34.88■■■■□ 3.17
DDX39A-205ENST00000586993 AGLP35573 1532 aa34.88■■■■□ 3.17
DDX39A-205ENST00000586993 ARHGEF5Q12774 1597 aa34.87■■■■□ 3.17
DDX39A-205ENST00000586993 MIA2Q96PC5 1412 aa34.87■■■■□ 3.17
DDX39A-205ENST00000586993 PLXNC1O60486 1568 aa34.82■■■■□ 3.16
DDX39A-205ENST00000586993 RTEL1-TNFRSF6BF6WH68 1400 aa34.8■■■■□ 3.16
DDX39A-205ENST00000586993 ILDR1Q86SU0 546 aaPredicted RBP34.79■■■■□ 3.16
DDX39A-205ENST00000586993 ADGBQ8N7X0 1667 aa34.79■■■■□ 3.16
DDX39A-205ENST00000586993 A2MP01023 1474 aa34.78■■■■□ 3.16
DDX39A-205ENST00000586993 PTPN23Q9H3S7 1636 aa34.76■■■■□ 3.15
DDX39A-205ENST00000586993 RSPH4AQ5TD94 716 aa34.75■■■■□ 3.15
DDX39A-205ENST00000586993 FGD6Q6ZV73 1430 aa34.74■■■■□ 3.15
DDX39A-205ENST00000586993 MAST1Q9Y2H9 1570 aa34.69■■■■□ 3.14
DDX39A-205ENST00000586993 TCOF1Q13428 1488 aaKnown RBP34.68■■■■□ 3.14
DDX39A-205ENST00000586993 PLPPR3Q6T4P5 718 aa34.65■■■■□ 3.14
DDX39A-205ENST00000586993 CROCC2H7BZ55 1655 aa34.63■■■■□ 3.13
DDX39A-205ENST00000586993 TSPY4P0CV99 314 aa34.63■■■■□ 3.13
DDX39A-205ENST00000586993 TSPY10P0CW01 314 aa34.63■■■■□ 3.13
DDX39A-205ENST00000586993 DHX29Q7Z478 1369 aaKnown RBP34.62■■■■□ 3.13
DDX39A-205ENST00000586993 LMTK3Q96Q04 1460 aa34.61■■■■□ 3.13
DDX39A-205ENST00000586993 ABCC5O15440 1437 aa34.61■■■■□ 3.13
DDX39A-205ENST00000586993 DNMT1P26358 1616 aaKnown RBP34.59■■■■□ 3.13
DDX39A-205ENST00000586993 CEBPAP49715 358 aaPredicted RBP34.58■■■■□ 3.13
DDX39A-205ENST00000586993 C3P01024 1663 aa34.57■■■■□ 3.13
DDX39A-205ENST00000586993 SHANK2Q9UPX8 1470 aa34.56■■■■□ 3.12
DDX39A-205ENST00000586993 DAPK1P53355 1430 aa34.55■■■■□ 3.12
DDX39A-205ENST00000586993 PPARGC1BQ86YN6 1023 aaKnown RBP34.55■■■■□ 3.12
DDX39A-205ENST00000586993 CNTLNQ9NXG0 1405 aa34.52■■■■□ 3.12
DDX39A-205ENST00000586993 MROH2AA6NES4 1674 aa34.51■■■■□ 3.12
DDX39A-205ENST00000586993 CLTCQ00610 1675 aaKnown RBP34.51■■■■□ 3.12
DDX39A-205ENST00000586993 GGT6Q6P531 493 aa34.51■■■■□ 3.12
DDX39A-205ENST00000586993 ESF1Q9H501 851 aaKnown RBP34.49■■■■□ 3.11
DDX39A-205ENST00000586993 KIF3BO15066 747 aa34.47■■■■□ 3.11
DDX39A-205ENST00000586993 HSPA2P54652 639 aa34.45■■■■□ 3.11
DDX39A-205ENST00000586993 FAM50AQ14320 339 aaKnown RBP34.44■■■■□ 3.1
DDX39A-205ENST00000586993 PREX1Q8TCU6 1659 aa34.42■■■■□ 3.1
DDX39A-205ENST00000586993 RNF17Q9BXT8 1623 aaKnown RBP34.41■■■■□ 3.1
DDX39A-205ENST00000586993 EIF2AK4Q9P2K8 1649 aaKnown RBP34.41■■■■□ 3.1
DDX39A-205ENST00000586993 DUOX2Q9NRD8 1548 aa34.41■■■■□ 3.1
DDX39A-205ENST00000586993 KIF15Q9NS87 1388 aa34.41■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms