RNA–Protein interactions for RNA: ENST00000586856.1

ERCC2-209, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-209ENST00000586856 AEBP2Q6ZN18 517 aaPredicted RBP38.36■■■■□ 3.73
ERCC2-209ENST00000586856 MTUS2Q5JR59 1369 aa38.34■■■■□ 3.73
ERCC2-209ENST00000586856 EHBP1L1Q8N3D4 1523 aa38.34■■■■□ 3.73
ERCC2-209ENST00000586856 EFCAB2Q5VUJ9 269 aa38.33■■■■□ 3.73
ERCC2-209ENST00000586856 SCAPERQ9BY12 1400 aa38.29■■■■□ 3.72
ERCC2-209ENST00000586856 ZMYM4Q5VZL5 1548 aa38.29■■■■□ 3.72
ERCC2-209ENST00000586856 TIAM1Q13009 1591 aa38.29■■■■□ 3.72
ERCC2-209ENST00000586856 POGZQ7Z3K3 1410 aa38.29■■■■□ 3.72
ERCC2-209ENST00000586856 ARHGEF40Q8TER5 1519 aa38.26■■■■□ 3.72
ERCC2-209ENST00000586856 KDM4FA0A1W2PPD8 638 aa38.22■■■■□ 3.71
ERCC2-209ENST00000586856 GPATCH8Q9UKJ3 1502 aaKnown RBP38.21■■■■□ 3.71
ERCC2-209ENST00000586856 ABCC1P33527 1531 aa38.2■■■■□ 3.71
ERCC2-209ENST00000586856 ZFYVE16Q7Z3T8 1539 aa38.17■■■■□ 3.7
ERCC2-209ENST00000586856 ITSN2Q9NZM3 1697 aa38.16■■■■□ 3.7
ERCC2-209ENST00000586856 CCNB3Q8WWL7 1395 aa38.15■■■■□ 3.7
ERCC2-209ENST00000586856 SUPT6HQ7KZ85 1726 aaKnown RBP38.14■■■■□ 3.7
ERCC2-209ENST00000586856 ZNF518AQ6AHZ1 1483 aa38.14■■■■□ 3.7
ERCC2-209ENST00000586856 MAGI2Q86UL8 1455 aa38.13■■■■□ 3.69
ERCC2-209ENST00000586856 SAMD9LQ8IVG5 1584 aa38.13■■■■□ 3.69
ERCC2-209ENST00000586856 KDM5CP41229 1560 aa38.12■■■■□ 3.69
ERCC2-209ENST00000586856 MAP3K1Q13233 1512 aa38.12■■■■□ 3.69
ERCC2-209ENST00000586856 ARHGEF12Q9NZN5 1544 aa38.1■■■■□ 3.69
ERCC2-209ENST00000586856 YEATS2Q9ULM3 1422 aa38.09■■■■□ 3.69
ERCC2-209ENST00000586856 LRRC9Q6ZRR7 1453 aa38.08■■■■□ 3.69
ERCC2-209ENST00000586856 NCOA2Q15596 1464 aa38.07■■■■□ 3.68
ERCC2-209ENST00000586856 HECW2Q9P2P5 1572 aa38.04■■■■□ 3.68
ERCC2-209ENST00000586856 SYCP2Q9BX26 1530 aa38.03■■■■□ 3.68
ERCC2-209ENST00000586856 TRAPPC8Q9Y2L5 1435 aa38.03■■■■□ 3.68
ERCC2-209ENST00000586856 CFDP1Q9UEE9 299 aaPredicted RBP38.02■■■■□ 3.68
ERCC2-209ENST00000586856 ZNF777Q9ULD5 760 aaPredicted RBP38.02■■■■□ 3.68
ERCC2-209ENST00000586856 AFAP1Q8N556 730 aa38■■■■□ 3.67
ERCC2-209ENST00000586856 SIGLEC1Q9BZZ2 1709 aa37.98■■■■□ 3.67
ERCC2-209ENST00000586856 PLEKHH2Q8IVE3 1493 aa37.97■■■■□ 3.67
ERCC2-209ENST00000586856 BCORL1Q5H9F3 1711 aa37.95■■■■□ 3.67
ERCC2-209ENST00000586856 ADAMTSL3P82987 1691 aa37.93■■■■□ 3.66
ERCC2-209ENST00000586856 MLH3Q9UHC1 1453 aa37.93■■■■□ 3.66
ERCC2-209ENST00000586856 KIAA1107Q9UPP5 1409 aa37.93■■■■□ 3.66
ERCC2-209ENST00000586856 KANK4Q5T7N3 995 aaPredicted RBP37.92■■■■□ 3.66
ERCC2-209ENST00000586856 DIP2CQ9Y2E4 1556 aa37.92■■■■□ 3.66
ERCC2-209ENST00000586856 ARID4BQ4LE39 1312 aaPredicted RBP37.91■■■■□ 3.66
ERCC2-209ENST00000586856 ABCA6Q8N139 1617 aa37.91■■■■□ 3.66
ERCC2-209ENST00000586856 ATP10AO60312 1499 aa37.9■■■■□ 3.66
ERCC2-209ENST00000586856 C9orf84Q5VXU9 1444 aa37.89■■■■□ 3.66
ERCC2-209ENST00000586856 KIDINS220Q9ULH0 1771 aa37.87■■■■□ 3.65
ERCC2-209ENST00000586856 APLP2Q06481 763 aa37.86■■■■□ 3.65
ERCC2-209ENST00000586856 HNRNPMP52272 730 aaKnown RBP eCLIP37.84■■■■□ 3.65
ERCC2-209ENST00000586856 MYT1LQ9UL68 1186 aa37.84■■■■□ 3.65
ERCC2-209ENST00000586856 ZNF644Q9H582 1327 aaPredicted RBP37.84■■■■□ 3.65
ERCC2-209ENST00000586856 MADDQ8WXG6 1647 aa37.83■■■■□ 3.65
ERCC2-209ENST00000586856 CAMSAP2Q08AD1 1489 aa37.82■■■■□ 3.64
ERCC2-209ENST00000586856 REREQ9P2R6 1566 aa37.81■■■■□ 3.64
ERCC2-209ENST00000586856 INO80Q9ULG1 1556 aaPredicted RBP37.8■■■■□ 3.64
ERCC2-209ENST00000586856 MBD5Q9P267 1494 aa37.77■■■■□ 3.64
ERCC2-209ENST00000586856 ATP7AQ04656 1500 aa37.77■■■■□ 3.64
ERCC2-209ENST00000586856 SPAG9O60271 1321 aaKnown RBP37.74■■■■□ 3.63
ERCC2-209ENST00000586856 MYOM3Q5VTT5 1437 aa37.73■■■■□ 3.63
ERCC2-209ENST00000586856 RIMS1Q86UR5 1692 aaKnown RBP37.72■■■■□ 3.63
ERCC2-209ENST00000586856 PTPRMP28827 1452 aa37.7■■■■□ 3.63
ERCC2-209ENST00000586856 FER1L4A9Z1Z3 1794 aa37.68■■■■□ 3.62
ERCC2-209ENST00000586856 CCDC141Q6ZP82 1450 aa37.68■■■■□ 3.62
ERCC2-209ENST00000586856 ARHGEF5Q12774 1597 aa37.66■■■■□ 3.62
ERCC2-209ENST00000586856 AGLP35573 1532 aa37.66■■■■□ 3.62
ERCC2-209ENST00000586856 MIA2Q96PC5 1412 aa37.65■■■■□ 3.62
ERCC2-209ENST00000586856 MLECQ14165 292 aa37.65■■■■□ 3.62
ERCC2-209ENST00000586856 ADGBQ8N7X0 1667 aa37.6■■■■□ 3.61
ERCC2-209ENST00000586856 PLXNC1O60486 1568 aa37.59■■■■□ 3.61
ERCC2-209ENST00000586856 RTEL1-TNFRSF6BF6WH68 1400 aa37.57■■■■□ 3.6
ERCC2-209ENST00000586856 A2MP01023 1474 aa37.55■■■■□ 3.6
ERCC2-209ENST00000586856 PTPN23Q9H3S7 1636 aa37.54■■■■□ 3.6
ERCC2-209ENST00000586856 RSPH4AQ5TD94 716 aa37.53■■■■□ 3.6
ERCC2-209ENST00000586856 FGD6Q6ZV73 1430 aa37.49■■■■□ 3.59
ERCC2-209ENST00000586856 MAST1Q9Y2H9 1570 aa37.46■■■■□ 3.59
ERCC2-209ENST00000586856 TCOF1Q13428 1488 aaKnown RBP37.44■■■■□ 3.58
ERCC2-209ENST00000586856 CROCC2H7BZ55 1655 aa37.42■■■■□ 3.58
ERCC2-209ENST00000586856 TSPY4P0CV99 314 aa37.39■■■■□ 3.58
ERCC2-209ENST00000586856 TSPY10P0CW01 314 aa37.39■■■■□ 3.58
ERCC2-209ENST00000586856 PLPPR3Q6T4P5 718 aa37.37■■■■□ 3.57
ERCC2-209ENST00000586856 DNMT1P26358 1616 aaKnown RBP37.36■■■■□ 3.57
ERCC2-209ENST00000586856 DHX29Q7Z478 1369 aaKnown RBP37.35■■■■□ 3.57
ERCC2-209ENST00000586856 SHANK2Q9UPX8 1470 aa37.33■■■■□ 3.57
ERCC2-209ENST00000586856 ABCC5O15440 1437 aa37.32■■■■□ 3.56
ERCC2-209ENST00000586856 C3P01024 1663 aa37.31■■■■□ 3.56
ERCC2-209ENST00000586856 CNTLNQ9NXG0 1405 aa37.31■■■■□ 3.56
ERCC2-209ENST00000586856 DAPK1P53355 1430 aa37.3■■■■□ 3.56
ERCC2-209ENST00000586856 MROH2AA6NES4 1674 aa37.29■■■■□ 3.56
ERCC2-209ENST00000586856 ESF1Q9H501 851 aaKnown RBP37.28■■■■□ 3.56
ERCC2-209ENST00000586856 CLTCQ00610 1675 aaKnown RBP37.27■■■■□ 3.56
ERCC2-209ENST00000586856 LMTK3Q96Q04 1460 aa37.25■■■■□ 3.55
ERCC2-209ENST00000586856 CEBPAP49715 358 aaPredicted RBP37.24■■■■□ 3.55
ERCC2-209ENST00000586856 GGT6Q6P531 493 aa37.22■■■■□ 3.55
ERCC2-209ENST00000586856 PREX1Q8TCU6 1659 aa37.2■■■■□ 3.55
ERCC2-209ENST00000586856 EIF2AK4Q9P2K8 1649 aaKnown RBP37.19■■■■□ 3.54
ERCC2-209ENST00000586856 PPARGC1BQ86YN6 1023 aaKnown RBP37.19■■■■□ 3.54
ERCC2-209ENST00000586856 KIF3BO15066 747 aa37.18■■■■□ 3.54
ERCC2-209ENST00000586856 DUOX2Q9NRD8 1548 aa37.17■■■■□ 3.54
ERCC2-209ENST00000586856 RNF17Q9BXT8 1623 aaKnown RBP37.16■■■■□ 3.54
ERCC2-209ENST00000586856 FAM50AQ14320 339 aaKnown RBP37.15■■■■□ 3.54
ERCC2-209ENST00000586856 KIF15Q9NS87 1388 aa37.14■■■■□ 3.54
ERCC2-209ENST00000586856 FAM135AQ9P2D6 1515 aa37.13■■■■□ 3.53
ERCC2-209ENST00000586856 PPP6R1Q9UPN7 881 aa37.12■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms