RNA–Protein interactions for RNA: ENST00000586728.5

CDIP1-210, Transcript of cell death inducing p53 target 1, humanhuman

TSL 5

Gene CDIP1, Length 756 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDIP1-210ENST00000586728 SAMD9Q5K651 1589 aa17.32■□□□□ 0.36
CDIP1-210ENST00000586728 NUP153P49790 1475 aaKnown RBP17.31■□□□□ 0.36
CDIP1-210ENST00000586728 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.28■□□□□ 0.36
CDIP1-210ENST00000586728 MLECQ14165 292 aa17.27■□□□□ 0.36
CDIP1-210ENST00000586728 CEBPAP49715 358 aaPredicted RBP17.26■□□□□ 0.35
CDIP1-210ENST00000586728 P3H3Q8IVL6 736 aa17.26■□□□□ 0.35
CDIP1-210ENST00000586728 ATP10AO60312 1499 aa17.24■□□□□ 0.35
CDIP1-210ENST00000586728 UHRF1BP1Q6BDS2 1440 aa17.23■□□□□ 0.35
CDIP1-210ENST00000586728 FAM9AQ8IZU1 332 aaPredicted RBP17.23■□□□□ 0.35
CDIP1-210ENST00000586728 C9orf84Q5VXU9 1444 aa17.21■□□□□ 0.35
CDIP1-210ENST00000586728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.18■□□□□ 0.34
CDIP1-210ENST00000586728 HNRNPUL2Q1KMD3 747 aaKnown RBP17.18■□□□□ 0.34
CDIP1-210ENST00000586728 SCAPERQ9BY12 1400 aa17.18■□□□□ 0.34
CDIP1-210ENST00000586728 C3P01024 1663 aa17.17■□□□□ 0.34
CDIP1-210ENST00000586728 PLEKHD1A6NEE1 506 aa17.17■□□□□ 0.34
CDIP1-210ENST00000586728 NCOA1Q15788 1441 aa17.16■□□□□ 0.34
CDIP1-210ENST00000586728 PLCH2O75038 1416 aa17.15■□□□□ 0.34
CDIP1-210ENST00000586728 REREQ9P2R6 1566 aa17.13■□□□□ 0.33
CDIP1-210ENST00000586728 KDM5CP41229 1560 aa17.11■□□□□ 0.33
CDIP1-210ENST00000586728 TRAPPC8Q9Y2L5 1435 aa17.1■□□□□ 0.33
CDIP1-210ENST00000586728 DIP2CQ9Y2E4 1556 aa17.08■□□□□ 0.32
CDIP1-210ENST00000586728 MED1Q15648 1581 aaPredicted RBP17.07■□□□□ 0.32
CDIP1-210ENST00000586728 AGLP35573 1532 aa17.06■□□□□ 0.32
CDIP1-210ENST00000586728 ZNF518AQ6AHZ1 1483 aa17.05■□□□□ 0.32
CDIP1-210ENST00000586728 MYO5CQ9NQX4 1742 aa17.05■□□□□ 0.32
CDIP1-210ENST00000586728 UBAP1LF5GYI3 381 aa17.05■□□□□ 0.32
CDIP1-210ENST00000586728 CAMSAP1Q5T5Y3 1602 aa17.04■□□□□ 0.32
CDIP1-210ENST00000586728 ABCA6Q8N139 1617 aa17.03■□□□□ 0.32
CDIP1-210ENST00000586728 ZNF335Q9H4Z2 1342 aaPredicted RBP17.03■□□□□ 0.32
CDIP1-210ENST00000586728 CDK13Q14004 1512 aaKnown RBP17.02■□□□□ 0.32
CDIP1-210ENST00000586728 EFCAB2Q5VUJ9 269 aa17.02■□□□□ 0.32
CDIP1-210ENST00000586728 MLH3Q9UHC1 1453 aa17■□□□□ 0.31
CDIP1-210ENST00000586728 AFAP1Q8N556 730 aa17■□□□□ 0.31
CDIP1-210ENST00000586728 NPATQ14207 1427 aa16.99■□□□□ 0.31
CDIP1-210ENST00000586728 MROH2AA6NES4 1674 aa16.98■□□□□ 0.31
CDIP1-210ENST00000586728 CNTLNQ9NXG0 1405 aa16.97■□□□□ 0.31
CDIP1-210ENST00000586728 TCOF1Q13428 1488 aaKnown RBP16.97■□□□□ 0.31
CDIP1-210ENST00000586728 ZNF142P52746 1687 aaPredicted RBP16.97■□□□□ 0.31
CDIP1-210ENST00000586728 HSPA1LP34931 641 aa16.96■□□□□ 0.31
CDIP1-210ENST00000586728 PLA2R1Q13018 1463 aa16.96■□□□□ 0.31
CDIP1-210ENST00000586728 KIF14Q15058 1648 aa16.96■□□□□ 0.3
CDIP1-210ENST00000586728 NCKAP5LQ9HCH0 1330 aa16.96■□□□□ 0.3
CDIP1-210ENST00000586728 KIDINS220Q9ULH0 1771 aa16.92■□□□□ 0.3
CDIP1-210ENST00000586728 CSRNP3Q8WYN3 585 aa16.92■□□□□ 0.3
CDIP1-210ENST00000586728 CDC42BPBQ9Y5S2 1711 aa16.92■□□□□ 0.3
CDIP1-210ENST00000586728 PKD2Q13563 968 aa16.91■□□□□ 0.3
CDIP1-210ENST00000586728 ARHGAP5Q13017 1502 aa16.91■□□□□ 0.3
CDIP1-210ENST00000586728 MYO3AQ8NEV4 1616 aa16.9■□□□□ 0.3
CDIP1-210ENST00000586728 ZMYM3Q14202 1370 aa16.89■□□□□ 0.29
CDIP1-210ENST00000586728 ALKQ9UM73 1620 aa16.88■□□□□ 0.29
CDIP1-210ENST00000586728 SUPT6HQ7KZ85 1726 aaKnown RBP16.88■□□□□ 0.29
CDIP1-210ENST00000586728 ESF1Q9H501 851 aaKnown RBP16.88■□□□□ 0.29
CDIP1-210ENST00000586728 CEP170BQ9Y4F5 1589 aaPredicted RBP16.88■□□□□ 0.29
CDIP1-210ENST00000586728 ABCC1P33527 1531 aa16.87■□□□□ 0.29
CDIP1-210ENST00000586728 ITSN2Q9NZM3 1697 aa16.87■□□□□ 0.29
CDIP1-210ENST00000586728 RANGAP1P46060 587 aaPredicted RBP16.86■□□□□ 0.29
CDIP1-210ENST00000586728 TROQ12816 1431 aaPredicted RBP16.85■□□□□ 0.29
CDIP1-210ENST00000586728 PTPRKQ15262 1439 aa16.84■□□□□ 0.29
CDIP1-210ENST00000586728 CPS1P31327 1500 aa16.84■□□□□ 0.29
CDIP1-210ENST00000586728 PREX2Q70Z35 1606 aa16.83■□□□□ 0.28
CDIP1-210ENST00000586728 CLTCQ00610 1675 aaKnown RBP16.82■□□□□ 0.28
CDIP1-210ENST00000586728 PPP6R1Q9UPN7 881 aa16.82■□□□□ 0.28
CDIP1-210ENST00000586728 LRRIQ1Q96JM4 1722 aa16.82■□□□□ 0.28
CDIP1-210ENST00000586728 TOM1O60784 492 aa16.81■□□□□ 0.28
CDIP1-210ENST00000586728 MYT1LQ9UL68 1186 aa16.81■□□□□ 0.28
CDIP1-210ENST00000586728 NEURL4Q96JN8 1562 aa16.81■□□□□ 0.28
CDIP1-210ENST00000586728 PIP4K2BP78356 416 aa16.8■□□□□ 0.28
CDIP1-210ENST00000586728 DNMT1P26358 1616 aaKnown RBP16.79■□□□□ 0.28
CDIP1-210ENST00000586728 CDK11AQ9UQ88 783 aaPredicted RBP16.79■□□□□ 0.28
CDIP1-210ENST00000586728 SHANK2Q9UPX8 1470 aa16.79■□□□□ 0.28
CDIP1-210ENST00000586728 PLXNC1O60486 1568 aa16.78■□□□□ 0.28
CDIP1-210ENST00000586728 SAMD9LQ8IVG5 1584 aa16.78■□□□□ 0.28
CDIP1-210ENST00000586728 POLR1AO95602 1720 aaPredicted RBP16.78■□□□□ 0.28
CDIP1-210ENST00000586728 PHF23Q9BUL5 403 aaPredicted RBP16.77■□□□□ 0.28
CDIP1-210ENST00000586728 RGS17Q9UGC6 210 aaPredicted RBP16.77■□□□□ 0.28
CDIP1-210ENST00000586728 VWDEQ8N2E2 1590 aa16.77■□□□□ 0.27
CDIP1-210ENST00000586728 SCAF1Q9H7N4 1312 aaKnown RBP16.76■□□□□ 0.27
CDIP1-210ENST00000586728 A2ML1A8K2U0 1454 aa16.76■□□□□ 0.27
CDIP1-210ENST00000586728 FMN1Q68DA7 1419 aa16.76■□□□□ 0.27
CDIP1-210ENST00000586728 CDC42BPAQ5VT25 1732 aa16.75■□□□□ 0.27
CDIP1-210ENST00000586728 CLIP1P30622 1438 aa16.74■□□□□ 0.27
CDIP1-210ENST00000586728 EEA1Q15075 1411 aa16.74■□□□□ 0.27
CDIP1-210ENST00000586728 ARHGAP35Q9NRY4 1499 aa16.7■□□□□ 0.26
CDIP1-210ENST00000586728 INO80Q9ULG1 1556 aaPredicted RBP16.69■□□□□ 0.26
CDIP1-210ENST00000586728 ATP7AQ04656 1500 aa16.68■□□□□ 0.26
CDIP1-210ENST00000586728 STRCP1A6NGW2 1772 aa16.68■□□□□ 0.26
CDIP1-210ENST00000586728 MED14O60244 1454 aa16.67■□□□□ 0.26
CDIP1-210ENST00000586728 ATP1B4Q9UN42 357 aaPredicted RBP16.67■□□□□ 0.26
CDIP1-210ENST00000586728 A2MP01023 1474 aa16.67■□□□□ 0.26
CDIP1-210ENST00000586728 SYCP2Q9BX26 1530 aa16.65■□□□□ 0.26
CDIP1-210ENST00000586728 DEPDC5O75140 1603 aa16.65■□□□□ 0.26
CDIP1-210ENST00000586728 SPAG9O60271 1321 aaKnown RBP16.65■□□□□ 0.26
CDIP1-210ENST00000586728 LRRC7Q96NW7 1537 aa16.63■□□□□ 0.25
CDIP1-210ENST00000586728 RNF17Q9BXT8 1623 aaKnown RBP16.63■□□□□ 0.25
CDIP1-210ENST00000586728 KIAA1107Q9UPP5 1409 aa16.62■□□□□ 0.25
CDIP1-210ENST00000586728 ADGBQ8N7X0 1667 aa16.61■□□□□ 0.25
CDIP1-210ENST00000586728 GGT6Q6P531 493 aa16.6■□□□□ 0.25
CDIP1-210ENST00000586728 GPATCH8Q9UKJ3 1502 aaKnown RBP16.6■□□□□ 0.25
CDIP1-210ENST00000586728 SYNMO15061 1565 aa16.6■□□□□ 0.25
CDIP1-210ENST00000586728 POTEAQ6S8J7 498 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms