RNA–Protein interactions for RNA: ENST00000586728.5

CDIP1-210, Transcript of cell death inducing p53 target 1, humanhuman

TSL 5

Gene CDIP1, Length 756 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDIP1-210ENST00000586728 NISCHQ9Y2I1 1504 aa26.02■■□□□ 1.76
CDIP1-210ENST00000586728 ABCC9O60706 1549 aa24.26■■□□□ 1.47
CDIP1-210ENST00000586728 CCDC180Q9P1Z9 1646 aa23.69■■□□□ 1.38
CDIP1-210ENST00000586728 DNAJC5BQ9UF47 199 aa23.5■■□□□ 1.35
CDIP1-210ENST00000586728 RB1CC1Q8TDY2 1594 aa22.83■■□□□ 1.25
CDIP1-210ENST00000586728 NACADO15069 1562 aa22.53■■□□□ 1.2
CDIP1-210ENST00000586728 PABPN1Q86U42 306 aaKnown RBP eCLIP22.45■■□□□ 1.18
CDIP1-210ENST00000586728 UNC13AQ9UPW8 1703 aa22.41■■□□□ 1.18
CDIP1-210ENST00000586728 BICRAQ9NZM4 1560 aa22.29■■□□□ 1.16
CDIP1-210ENST00000586728 MYO15BQ96JP2 1530 aa22.06■■□□□ 1.12
CDIP1-210ENST00000586728 DNAJC5Q9H3Z4 198 aa22.06■■□□□ 1.12
CDIP1-210ENST00000586728 DCAF8L2P0C7V8 631 aa22.02■■□□□ 1.12
CDIP1-210ENST00000586728 CECR2Q9BXF3 1484 aa21.96■■□□□ 1.11
CDIP1-210ENST00000586728 CC2D2AQ9P2K1 1620 aa21.95■■□□□ 1.1
CDIP1-210ENST00000586728 SHROOM4Q9ULL8 1493 aa21.88■■□□□ 1.09
CDIP1-210ENST00000586728 EIF4G1Q04637 1599 aaKnown RBP21.74■■□□□ 1.07
CDIP1-210ENST00000586728 DCAF1Q9Y4B6 1507 aa21.5■■□□□ 1.03
CDIP1-210ENST00000586728 SCRIBQ14160 1630 aa21.44■■□□□ 1.02
CDIP1-210ENST00000586728 ZCCHC6Q5VYS8 1495 aaKnown RBP21.42■■□□□ 1.02
CDIP1-210ENST00000586728 CUX2O14529 1486 aa21.26■□□□□ 0.99
CDIP1-210ENST00000586728 ERCC6Q03468 1493 aa20.94■□□□□ 0.94
CDIP1-210ENST00000586728 NCAPD3P42695 1498 aa20.84■□□□□ 0.93
CDIP1-210ENST00000586728 NESP48681 1621 aa20.68■□□□□ 0.9
CDIP1-210ENST00000586728 THOC2Q8NI27 1593 aaKnown RBP20.68■□□□□ 0.9
CDIP1-210ENST00000586728 ATAD2BQ9ULI0 1458 aa20.65■□□□□ 0.9
CDIP1-210ENST00000586728 TRIM41Q8WV44 630 aa20.64■□□□□ 0.89
CDIP1-210ENST00000586728 HMGXB3Q12766 1538 aa20.6■□□□□ 0.89
CDIP1-210ENST00000586728 SMARCA2P51531 1590 aa20.52■□□□□ 0.88
CDIP1-210ENST00000586728 SMARCA4P51532 1647 aa20.45■□□□□ 0.86
CDIP1-210ENST00000586728 LAMC3Q9Y6N6 1575 aa20.44■□□□□ 0.86
CDIP1-210ENST00000586728 KIF21AQ7Z4S6 1674 aa20.42■□□□□ 0.86
CDIP1-210ENST00000586728 BAZ1BQ9UIG0 1483 aaKnown RBP20.34■□□□□ 0.85
CDIP1-210ENST00000586728 PEG3Q9GZU2 1588 aa20.33■□□□□ 0.84
CDIP1-210ENST00000586728 PDS5BQ9NTI5 1447 aa20.29■□□□□ 0.84
CDIP1-210ENST00000586728 WDR62O43379 1518 aa20.22■□□□□ 0.83
CDIP1-210ENST00000586728 BAZ1AQ9NRL2 1556 aaPredicted RBP20.21■□□□□ 0.83
CDIP1-210ENST00000586728 MRC2Q9UBG0 1479 aa20.18■□□□□ 0.82
CDIP1-210ENST00000586728 CADPSQ9ULU8 1353 aa20.11■□□□□ 0.81
CDIP1-210ENST00000586728 OSCARQ8IYS5 282 aa20.1■□□□□ 0.81
CDIP1-210ENST00000586728 MROH2BQ7Z745 1585 aa20.04■□□□□ 0.8
CDIP1-210ENST00000586728 RIMBP3CA6NJZ7 1639 aa19.99■□□□□ 0.79
CDIP1-210ENST00000586728 RIMBP3BA6NNM3 1639 aa19.99■□□□□ 0.79
CDIP1-210ENST00000586728 RIMBP3Q9UFD9 1639 aa19.99■□□□□ 0.79
CDIP1-210ENST00000586728 CEP164Q9UPV0 1460 aa19.93■□□□□ 0.78
CDIP1-210ENST00000586728 FANCD2Q9BXW9 1451 aa19.87■□□□□ 0.77
CDIP1-210ENST00000586728 ARHGEF11O15085 1522 aa19.84■□□□□ 0.77
CDIP1-210ENST00000586728 URB2Q14146 1524 aaKnown RBP19.8■□□□□ 0.76
CDIP1-210ENST00000586728 CFTRP13569 1480 aa19.78■□□□□ 0.76
CDIP1-210ENST00000586728 WIZO95785 1651 aa19.75■□□□□ 0.75
CDIP1-210ENST00000586728 ZNF608Q9ULD9 1512 aaPredicted RBP19.66■□□□□ 0.74
CDIP1-210ENST00000586728 CYB5RLQ6IPT4 315 aa19.65■□□□□ 0.74
CDIP1-210ENST00000586728 ARAP1Q96P48 1450 aa19.61■□□□□ 0.73
CDIP1-210ENST00000586728 IFT140Q96RY7 1462 aa19.59■□□□□ 0.73
CDIP1-210ENST00000586728 TRHP20396 242 aaPredicted RBP19.58■□□□□ 0.72
CDIP1-210ENST00000586728 PRDM2Q13029 1718 aa19.54■□□□□ 0.72
CDIP1-210ENST00000586728 EIF4G3O43432 1585 aaKnown RBP19.51■□□□□ 0.71
CDIP1-210ENST00000586728 CHD1O14646 1710 aa19.51■□□□□ 0.71
CDIP1-210ENST00000586728 AEBP2Q6ZN18 517 aaPredicted RBP19.5■□□□□ 0.71
CDIP1-210ENST00000586728 RSF1Q96T23 1441 aaPredicted RBP19.5■□□□□ 0.71
CDIP1-210ENST00000586728 TOP2AP11388 1531 aaKnown RBP19.45■□□□□ 0.7
CDIP1-210ENST00000586728 TOPBP1Q92547 1522 aa19.44■□□□□ 0.7
CDIP1-210ENST00000586728 TARBP1Q13395 1621 aaKnown RBP19.38■□□□□ 0.69
CDIP1-210ENST00000586728 AQRO60306 1485 aaKnown RBP eCLIP19.35■□□□□ 0.69
CDIP1-210ENST00000586728 ABCC8Q09428 1581 aa19.33■□□□□ 0.69
CDIP1-210ENST00000586728 DNMBPQ6XZF7 1577 aa19.31■□□□□ 0.68
CDIP1-210ENST00000586728 CLASP1Q7Z460 1538 aa19.3■□□□□ 0.68
CDIP1-210ENST00000586728 CCDC88BA6NC98 1476 aa19.23■□□□□ 0.67
CDIP1-210ENST00000586728 FBLN2P98095 1184 aa19.23■□□□□ 0.67
CDIP1-210ENST00000586728 POLA1P09884 1462 aaPredicted RBP19.2■□□□□ 0.66
CDIP1-210ENST00000586728 SYNJ1O43426 1573 aa19.14■□□□□ 0.65
CDIP1-210ENST00000586728 SNAPC4Q5SXM2 1469 aa19.12■□□□□ 0.65
CDIP1-210ENST00000586728 WDR97A6NE52 1622 aa19.11■□□□□ 0.65
CDIP1-210ENST00000586728 RAD54L2Q9Y4B4 1467 aa19.11■□□□□ 0.65
CDIP1-210ENST00000586728 TDRD9Q8NDG6 1382 aaKnown RBP19.1■□□□□ 0.65
CDIP1-210ENST00000586728 GAPVD1Q14C86 1478 aa19.08■□□□□ 0.64
CDIP1-210ENST00000586728 MAGI1Q96QZ7 1491 aaPredicted RBP19.08■□□□□ 0.64
CDIP1-210ENST00000586728 SOGA1O94964 1423 aa19.05■□□□□ 0.64
CDIP1-210ENST00000586728 CHMP7Q8WUX9 453 aaPredicted RBP19.03■□□□□ 0.64
CDIP1-210ENST00000586728 SYNJ2O15056 1496 aa19.02■□□□□ 0.63
CDIP1-210ENST00000586728 GRIN2BQ13224 1484 aa18.98■□□□□ 0.63
CDIP1-210ENST00000586728 FGD5Q6ZNL6 1462 aa18.95■□□□□ 0.62
CDIP1-210ENST00000586728 KIF13AQ9H1H9 1805 aa18.94■□□□□ 0.62
CDIP1-210ENST00000586728 ERCC6L2Q5T890 1561 aa18.93■□□□□ 0.62
CDIP1-210ENST00000586728 PBRM1Q86U86 1689 aa18.89■□□□□ 0.61
CDIP1-210ENST00000586728 ILDR1Q86SU0 546 aaPredicted RBP18.88■□□□□ 0.61
CDIP1-210ENST00000586728 CUX1P39880 1505 aa18.86■□□□□ 0.61
CDIP1-210ENST00000586728 CEP170Q5SW79 1584 aa18.81■□□□□ 0.6
CDIP1-210ENST00000586728 SHROOM2Q13796 1616 aa18.79■□□□□ 0.6
CDIP1-210ENST00000586728 ABCA5Q8WWZ7 1642 aa18.79■□□□□ 0.6
CDIP1-210ENST00000586728 KDM4FA0A1W2PPD8 638 aa18.78■□□□□ 0.6
CDIP1-210ENST00000586728 NUP160Q12769 1436 aa18.76■□□□□ 0.59
CDIP1-210ENST00000586728 GRIN2AQ12879 1464 aa18.76■□□□□ 0.59
CDIP1-210ENST00000586728 ABCA10Q8WWZ4 1543 aa18.74■□□□□ 0.59
CDIP1-210ENST00000586728 ABCC10Q5T3U5 1492 aa18.7■□□□□ 0.58
CDIP1-210ENST00000586728 ADAMTS12P58397 1594 aa18.67■□□□□ 0.58
CDIP1-210ENST00000586728 DIP2BQ9P265 1576 aa18.64■□□□□ 0.57
CDIP1-210ENST00000586728 MAPKBP1O60336 1514 aa18.63■□□□□ 0.57
CDIP1-210ENST00000586728 FAM69CQ0P6D2 419 aa18.61■□□□□ 0.57
CDIP1-210ENST00000586728 KDM6BO15054 1643 aa18.6■□□□□ 0.57
CDIP1-210ENST00000586728 FHAD1B1AJZ9 1412 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms