RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 ZFYVE16Q7Z3T8 1539 aa29.98■■■□□ 2.39
ATG4D-203ENST00000585752 MYT1LQ9UL68 1186 aa29.98■■■□□ 2.39
ATG4D-203ENST00000585752 ZMYM4Q5VZL5 1548 aa29.97■■■□□ 2.39
ATG4D-203ENST00000585752 BCORL1Q5H9F3 1711 aa29.96■■■□□ 2.39
ATG4D-203ENST00000585752 MAGI2Q86UL8 1455 aa29.96■■■□□ 2.39
ATG4D-203ENST00000585752 POGZQ7Z3K3 1410 aa29.95■■■□□ 2.38
ATG4D-203ENST00000585752 ADAMTSL3P82987 1691 aa29.95■■■□□ 2.38
ATG4D-203ENST00000585752 CDC42BPBQ9Y5S2 1711 aa29.94■■■□□ 2.38
ATG4D-203ENST00000585752 PREX2Q70Z35 1606 aa29.89■■■□□ 2.38
ATG4D-203ENST00000585752 ZNF518AQ6AHZ1 1483 aa29.87■■■□□ 2.37
ATG4D-203ENST00000585752 YEATS2Q9ULM3 1422 aa29.87■■■□□ 2.37
ATG4D-203ENST00000585752 HECW2Q9P2P5 1572 aa29.86■■■□□ 2.37
ATG4D-203ENST00000585752 MADDQ8WXG6 1647 aa29.86■■■□□ 2.37
ATG4D-203ENST00000585752 CDC42BPAQ5VT25 1732 aa29.86■■■□□ 2.37
ATG4D-203ENST00000585752 CEP162Q5TB80 1403 aa29.86■■■□□ 2.37
ATG4D-203ENST00000585752 PTPRMP28827 1452 aa29.86■■■□□ 2.37
ATG4D-203ENST00000585752 RIMS1Q86UR5 1692 aaKnown RBP29.82■■■□□ 2.36
ATG4D-203ENST00000585752 MTUS2Q5JR59 1369 aa29.82■■■□□ 2.36
ATG4D-203ENST00000585752 ZNF777Q9ULD5 760 aaPredicted RBP29.82■■■□□ 2.36
ATG4D-203ENST00000585752 MLECQ14165 292 aa29.81■■■□□ 2.36
ATG4D-203ENST00000585752 AFAP1Q8N556 730 aa29.81■■■□□ 2.36
ATG4D-203ENST00000585752 ATP10AO60312 1499 aa29.8■■■□□ 2.36
ATG4D-203ENST00000585752 C9orf84Q5VXU9 1444 aa29.79■■■□□ 2.36
ATG4D-203ENST00000585752 ITSN2Q9NZM3 1697 aa29.77■■■□□ 2.36
ATG4D-203ENST00000585752 LOC105371045A0A1W2PR82 267 aa29.77■■■□□ 2.36
ATG4D-203ENST00000585752 PLPPR3Q6T4P5 718 aa29.77■■■□□ 2.36
ATG4D-203ENST00000585752 KDM5CP41229 1560 aa29.75■■■□□ 2.35
ATG4D-203ENST00000585752 ABCC1P33527 1531 aa29.75■■■□□ 2.35
ATG4D-203ENST00000585752 FER1L4A9Z1Z3 1794 aa29.74■■■□□ 2.35
ATG4D-203ENST00000585752 CCNB3Q8WWL7 1395 aa29.74■■■□□ 2.35
ATG4D-203ENST00000585752 SIGLEC1Q9BZZ2 1709 aa29.72■■■□□ 2.35
ATG4D-203ENST00000585752 CFDP1Q9UEE9 299 aaPredicted RBP29.71■■■□□ 2.35
ATG4D-203ENST00000585752 GPATCH8Q9UKJ3 1502 aaKnown RBP29.69■■■□□ 2.34
ATG4D-203ENST00000585752 EHBP1L1Q8N3D4 1523 aa29.67■■■□□ 2.34
ATG4D-203ENST00000585752 TRAPPC8Q9Y2L5 1435 aa29.67■■■□□ 2.34
ATG4D-203ENST00000585752 MLH3Q9UHC1 1453 aa29.67■■■□□ 2.34
ATG4D-203ENST00000585752 ARHGEF12Q9NZN5 1544 aa29.65■■■□□ 2.34
ATG4D-203ENST00000585752 SAMD9LQ8IVG5 1584 aa29.64■■■□□ 2.34
ATG4D-203ENST00000585752 DIP2CQ9Y2E4 1556 aa29.64■■■□□ 2.33
ATG4D-203ENST00000585752 PLEKHH2Q8IVE3 1493 aa29.63■■■□□ 2.33
ATG4D-203ENST00000585752 ESF1Q9H501 851 aaKnown RBP29.62■■■□□ 2.33
ATG4D-203ENST00000585752 ABCA6Q8N139 1617 aa29.62■■■□□ 2.33
ATG4D-203ENST00000585752 SYCP2Q9BX26 1530 aa29.61■■■□□ 2.33
ATG4D-203ENST00000585752 HNRNPMP52272 730 aaKnown RBP eCLIP29.61■■■□□ 2.33
ATG4D-203ENST00000585752 SPAG9O60271 1321 aaKnown RBP29.59■■■□□ 2.33
ATG4D-203ENST00000585752 SUPT6HQ7KZ85 1726 aaKnown RBP29.58■■■□□ 2.33
ATG4D-203ENST00000585752 REREQ9P2R6 1566 aa29.58■■■□□ 2.33
ATG4D-203ENST00000585752 KIDINS220Q9ULH0 1771 aa29.58■■■□□ 2.33
ATG4D-203ENST00000585752 KIAA1107Q9UPP5 1409 aa29.55■■■□□ 2.32
ATG4D-203ENST00000585752 TIAM1Q13009 1591 aa29.54■■■□□ 2.32
ATG4D-203ENST00000585752 VPS8Q8N3P4 1428 aa29.54■■■□□ 2.32
ATG4D-203ENST00000585752 AGLP35573 1532 aa29.49■■■□□ 2.31
ATG4D-203ENST00000585752 ATP7AQ04656 1500 aa29.47■■■□□ 2.31
ATG4D-203ENST00000585752 LMTK3Q96Q04 1460 aa29.47■■■□□ 2.31
ATG4D-203ENST00000585752 NCOA2Q15596 1464 aa29.46■■■□□ 2.31
ATG4D-203ENST00000585752 CEBPAP49715 358 aaPredicted RBP29.45■■■□□ 2.31
ATG4D-203ENST00000585752 APLP2Q06481 763 aa29.44■■■□□ 2.3
ATG4D-203ENST00000585752 ZNF644Q9H582 1327 aaPredicted RBP29.44■■■□□ 2.3
ATG4D-203ENST00000585752 PREX1Q8TCU6 1659 aa29.42■■■□□ 2.3
ATG4D-203ENST00000585752 SETD1BQ9UPS6 1966 aaKnown RBP29.42■■■□□ 2.3
ATG4D-203ENST00000585752 INO80Q9ULG1 1556 aaPredicted RBP29.41■■■□□ 2.3
ATG4D-203ENST00000585752 HSPA2P54652 639 aa29.4■■■□□ 2.3
ATG4D-203ENST00000585752 ADGBQ8N7X0 1667 aa29.4■■■□□ 2.3
ATG4D-203ENST00000585752 LRRC9Q6ZRR7 1453 aa29.38■■■□□ 2.29
ATG4D-203ENST00000585752 A2MP01023 1474 aa29.37■■■□□ 2.29
ATG4D-203ENST00000585752 RSPH4AQ5TD94 716 aa29.37■■■□□ 2.29
ATG4D-203ENST00000585752 C3P01024 1663 aa29.37■■■□□ 2.29
ATG4D-203ENST00000585752 CNTLNQ9NXG0 1405 aa29.37■■■□□ 2.29
ATG4D-203ENST00000585752 CAMSAP2Q08AD1 1489 aa29.35■■■□□ 2.29
ATG4D-203ENST00000585752 MAP3K1Q13233 1512 aa29.34■■■□□ 2.29
ATG4D-203ENST00000585752 MBD5Q9P267 1494 aa29.32■■■□□ 2.28
ATG4D-203ENST00000585752 UHRF1BP1Q6BDS2 1440 aa29.31■■■□□ 2.28
ATG4D-203ENST00000585752 TSPY4P0CV99 314 aa29.31■■■□□ 2.28
ATG4D-203ENST00000585752 TSPY10P0CW01 314 aa29.31■■■□□ 2.28
ATG4D-203ENST00000585752 GGT6Q6P531 493 aa29.31■■■□□ 2.28
ATG4D-203ENST00000585752 CCDC141Q6ZP82 1450 aa29.3■■■□□ 2.28
ATG4D-203ENST00000585752 RTEL1-TNFRSF6BF6WH68 1400 aa29.3■■■□□ 2.28
ATG4D-203ENST00000585752 ILDR1Q86SU0 546 aaPredicted RBP29.3■■■□□ 2.28
ATG4D-203ENST00000585752 MROH2AA6NES4 1674 aa29.28■■■□□ 2.28
ATG4D-203ENST00000585752 PLXNC1O60486 1568 aa29.27■■■□□ 2.28
ATG4D-203ENST00000585752 CLTCQ00610 1675 aaKnown RBP29.26■■■□□ 2.27
ATG4D-203ENST00000585752 KANK4Q5T7N3 995 aaPredicted RBP29.26■■■□□ 2.27
ATG4D-203ENST00000585752 ARHGEF5Q12774 1597 aa29.22■■■□□ 2.27
ATG4D-203ENST00000585752 PPP6R1Q9UPN7 881 aa29.21■■■□□ 2.27
ATG4D-203ENST00000585752 ZMYM3Q14202 1370 aa29.21■■■□□ 2.27
ATG4D-203ENST00000585752 DHX29Q7Z478 1369 aaKnown RBP29.2■■■□□ 2.26
ATG4D-203ENST00000585752 DMRT2Q9Y5R5 561 aa29.19■■■□□ 2.26
ATG4D-203ENST00000585752 MYOM3Q5VTT5 1437 aa29.18■■■□□ 2.26
ATG4D-203ENST00000585752 KIF3BO15066 747 aa29.17■■■□□ 2.26
ATG4D-203ENST00000585752 MIA2Q96PC5 1412 aa29.16■■■□□ 2.26
ATG4D-203ENST00000585752 NPATQ14207 1427 aa29.13■■■□□ 2.25
ATG4D-203ENST00000585752 STRCQ7RTU9 1775 aa29.08■■■□□ 2.25
ATG4D-203ENST00000585752 FBXO41Q8TF61 875 aa29.07■■■□□ 2.24
ATG4D-203ENST00000585752 MAST1Q9Y2H9 1570 aa29.06■■■□□ 2.24
ATG4D-203ENST00000585752 WASHC2CQ9Y4E1 1318 aa29.06■■■□□ 2.24
ATG4D-203ENST00000585752 PTPN23Q9H3S7 1636 aa29.04■■■□□ 2.24
ATG4D-203ENST00000585752 PTPRKQ15262 1439 aa29.01■■■□□ 2.23
ATG4D-203ENST00000585752 MYO3AQ8NEV4 1616 aa29.01■■■□□ 2.23
ATG4D-203ENST00000585752 KDM5DQ9BY66 1539 aa29■■■□□ 2.23
ATG4D-203ENST00000585752 FAM135AQ9P2D6 1515 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms