RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 FMN1Q68DA7 1419 aa37.77■■■■□ 3.64
LSM7-203ENST00000585409 FER1L4A9Z1Z3 1794 aa37.73■■■■□ 3.63
LSM7-203ENST00000585409 ARHGAP35Q9NRY4 1499 aa37.73■■■■□ 3.63
LSM7-203ENST00000585409 UBTFP17480 764 aaKnown RBP37.67■■■■□ 3.62
LSM7-203ENST00000585409 KIF14Q15058 1648 aa37.67■■■■□ 3.62
LSM7-203ENST00000585409 ATP10AO60312 1499 aa37.64■■■■□ 3.62
LSM7-203ENST00000585409 EFCAB2Q5VUJ9 269 aa37.64■■■■□ 3.62
LSM7-203ENST00000585409 ARHGEF12Q9NZN5 1544 aa37.63■■■■□ 3.61
LSM7-203ENST00000585409 HSPA2P54652 639 aa37.63■■■■□ 3.61
LSM7-203ENST00000585409 ATP1B4Q9UN42 357 aaPredicted RBP37.62■■■■□ 3.61
LSM7-203ENST00000585409 CDK11AQ9UQ88 783 aaPredicted RBP37.62■■■■□ 3.61
LSM7-203ENST00000585409 C9orf84Q5VXU9 1444 aa37.61■■■■□ 3.61
LSM7-203ENST00000585409 LRRIQ1Q96JM4 1722 aa37.61■■■■□ 3.61
LSM7-203ENST00000585409 MLECQ14165 292 aa37.6■■■■□ 3.61
LSM7-203ENST00000585409 EHMT2Q96KQ7 1210 aa37.6■■■■□ 3.61
LSM7-203ENST00000585409 PLPPR3Q6T4P5 718 aa37.59■■■■□ 3.61
LSM7-203ENST00000585409 TROQ12816 1431 aaPredicted RBP37.59■■■■□ 3.61
LSM7-203ENST00000585409 KDM5CP41229 1560 aa37.56■■■■□ 3.6
LSM7-203ENST00000585409 ZNF518AQ6AHZ1 1483 aa37.56■■■■□ 3.6
LSM7-203ENST00000585409 ARHGAP5Q13017 1502 aa37.52■■■■□ 3.6
LSM7-203ENST00000585409 CLIP1P30622 1438 aa37.51■■■■□ 3.59
LSM7-203ENST00000585409 PREX1Q8TCU6 1659 aa37.49■■■■□ 3.59
LSM7-203ENST00000585409 CDC42BPBQ9Y5S2 1711 aa37.48■■■■□ 3.59
LSM7-203ENST00000585409 REREQ9P2R6 1566 aa37.43■■■■□ 3.58
LSM7-203ENST00000585409 DIP2CQ9Y2E4 1556 aa37.43■■■■□ 3.58
LSM7-203ENST00000585409 AFAP1Q8N556 730 aa37.43■■■■□ 3.58
LSM7-203ENST00000585409 PREX2Q70Z35 1606 aa37.4■■■■□ 3.58
LSM7-203ENST00000585409 ABCA6Q8N139 1617 aa37.37■■■■□ 3.57
LSM7-203ENST00000585409 MLH3Q9UHC1 1453 aa37.37■■■■□ 3.57
LSM7-203ENST00000585409 CEBPAP49715 358 aaPredicted RBP37.36■■■■□ 3.57
LSM7-203ENST00000585409 SETD1BQ9UPS6 1966 aaKnown RBP37.35■■■■□ 3.57
LSM7-203ENST00000585409 ABCC1P33527 1531 aa37.34■■■■□ 3.57
LSM7-203ENST00000585409 CASKIN1Q8WXD9 1431 aa37.34■■■■□ 3.57
LSM7-203ENST00000585409 CCDC18Q5T9S5 1454 aa37.33■■■■□ 3.57
LSM7-203ENST00000585409 CERKQ8TCT0 537 aa37.33■■■■□ 3.57
LSM7-203ENST00000585409 ITSN2Q9NZM3 1697 aa37.32■■■■□ 3.57
LSM7-203ENST00000585409 STRCQ7RTU9 1775 aa37.3■■■■□ 3.56
LSM7-203ENST00000585409 AGLP35573 1532 aa37.29■■■■□ 3.56
LSM7-203ENST00000585409 TRAPPC8Q9Y2L5 1435 aa37.28■■■■□ 3.56
LSM7-203ENST00000585409 CDC42BPAQ5VT25 1732 aa37.27■■■■□ 3.56
LSM7-203ENST00000585409 MYT1LQ9UL68 1186 aa37.26■■■■□ 3.56
LSM7-203ENST00000585409 C3P01024 1663 aa37.25■■■■□ 3.55
LSM7-203ENST00000585409 UHRF1BP1Q6BDS2 1440 aa37.24■■■■□ 3.55
LSM7-203ENST00000585409 KIDINS220Q9ULH0 1771 aa37.23■■■■□ 3.55
LSM7-203ENST00000585409 FYCO1Q9BQS8 1478 aa37.18■■■■□ 3.54
LSM7-203ENST00000585409 DMRT2Q9Y5R5 561 aa37.16■■■■□ 3.54
LSM7-203ENST00000585409 SAMD9LQ8IVG5 1584 aa37.12■■■■□ 3.53
LSM7-203ENST00000585409 CNTLNQ9NXG0 1405 aa37.07■■■■□ 3.52
LSM7-203ENST00000585409 PTPRTO14522 1441 aa37.05■■■■□ 3.52
LSM7-203ENST00000585409 ESF1Q9H501 851 aaKnown RBP37.05■■■■□ 3.52
LSM7-203ENST00000585409 GPATCH8Q9UKJ3 1502 aaKnown RBP37.05■■■■□ 3.52
LSM7-203ENST00000585409 SYCP2Q9BX26 1530 aa37.04■■■■□ 3.52
LSM7-203ENST00000585409 MROH2AA6NES4 1674 aa37.03■■■■□ 3.52
LSM7-203ENST00000585409 LOC105371045A0A1W2PR82 267 aa37.03■■■■□ 3.52
LSM7-203ENST00000585409 ZNF777Q9ULD5 760 aaPredicted RBP36.97■■■■□ 3.51
LSM7-203ENST00000585409 SUPT6HQ7KZ85 1726 aaKnown RBP36.95■■■■□ 3.51
LSM7-203ENST00000585409 KIAA1107Q9UPP5 1409 aa36.94■■■■□ 3.5
LSM7-203ENST00000585409 INO80Q9ULG1 1556 aaPredicted RBP36.94■■■■□ 3.5
LSM7-203ENST00000585409 ATP7AQ04656 1500 aa36.94■■■■□ 3.5
LSM7-203ENST00000585409 NPATQ14207 1427 aa36.93■■■■□ 3.5
LSM7-203ENST00000585409 NCOA1Q15788 1441 aa36.93■■■■□ 3.5
LSM7-203ENST00000585409 CEP162Q5TB80 1403 aa36.93■■■■□ 3.5
LSM7-203ENST00000585409 SPAG9O60271 1321 aaKnown RBP36.93■■■■□ 3.5
LSM7-203ENST00000585409 PLXNC1O60486 1568 aa36.92■■■■□ 3.5
LSM7-203ENST00000585409 PLEKHH2Q8IVE3 1493 aa36.91■■■■□ 3.5
LSM7-203ENST00000585409 HNRNPMP52272 730 aaKnown RBP eCLIP36.91■■■■□ 3.5
LSM7-203ENST00000585409 LTBP4Q8N2S1 1624 aa36.89■■■■□ 3.5
LSM7-203ENST00000585409 ZMYM3Q14202 1370 aa36.87■■■■□ 3.49
LSM7-203ENST00000585409 CLTCQ00610 1675 aaKnown RBP36.85■■■■□ 3.49
LSM7-203ENST00000585409 CCNB3Q8WWL7 1395 aa36.84■■■■□ 3.49
LSM7-203ENST00000585409 CFDP1Q9UEE9 299 aaPredicted RBP36.84■■■■□ 3.49
LSM7-203ENST00000585409 CAMSAP1Q5T5Y3 1602 aa36.84■■■■□ 3.49
LSM7-203ENST00000585409 A2MP01023 1474 aa36.83■■■■□ 3.49
LSM7-203ENST00000585409 IQSEC2Q5JU85 1478 aa36.8■■■■□ 3.48
LSM7-203ENST00000585409 ZNF142P52746 1687 aaPredicted RBP36.8■■■■□ 3.48
LSM7-203ENST00000585409 ADGBQ8N7X0 1667 aa36.78■■■■□ 3.48
LSM7-203ENST00000585409 MTUS2Q5JR59 1369 aa36.78■■■■□ 3.48
LSM7-203ENST00000585409 MYO3AQ8NEV4 1616 aa36.77■■■■□ 3.48
LSM7-203ENST00000585409 TIAM1Q13009 1591 aa36.75■■■■□ 3.47
LSM7-203ENST00000585409 PTPRKQ15262 1439 aa36.73■■■■□ 3.47
LSM7-203ENST00000585409 EHBP1L1Q8N3D4 1523 aa36.69■■■■□ 3.46
LSM7-203ENST00000585409 PLA2R1Q13018 1463 aa36.69■■■■□ 3.46
LSM7-203ENST00000585409 MBD5Q9P267 1494 aa36.69■■■■□ 3.46
LSM7-203ENST00000585409 CEP170BQ9Y4F5 1589 aaPredicted RBP36.69■■■■□ 3.46
LSM7-203ENST00000585409 DISP3Q9P2K9 1392 aa36.66■■■■□ 3.46
LSM7-203ENST00000585409 ZNF644Q9H582 1327 aaPredicted RBP36.66■■■■□ 3.46
LSM7-203ENST00000585409 GGT6Q6P531 493 aa36.66■■■■□ 3.46
LSM7-203ENST00000585409 PPP6R1Q9UPN7 881 aa36.66■■■■□ 3.46
LSM7-203ENST00000585409 NCKAP5LQ9HCH0 1330 aa36.65■■■■□ 3.46
LSM7-203ENST00000585409 TCOF1Q13428 1488 aaKnown RBP36.63■■■■□ 3.45
LSM7-203ENST00000585409 RTEL1-TNFRSF6BF6WH68 1400 aa36.63■■■■□ 3.45
LSM7-203ENST00000585409 PKD2Q13563 968 aa36.59■■■■□ 3.45
LSM7-203ENST00000585409 ILDR2Q71H61 639 aa36.58■■■■□ 3.45
LSM7-203ENST00000585409 ZNF335Q9H4Z2 1342 aaPredicted RBP36.57■■■■□ 3.44
LSM7-203ENST00000585409 SPATA31D1Q6ZQQ2 1576 aa36.56■■■■□ 3.44
LSM7-203ENST00000585409 DHX29Q7Z478 1369 aaKnown RBP36.54■■■■□ 3.44
LSM7-203ENST00000585409 A2ML1A8K2U0 1454 aa36.52■■■■□ 3.44
LSM7-203ENST00000585409 DNMT1P26358 1616 aaKnown RBP36.52■■■■□ 3.44
LSM7-203ENST00000585409 VPS8Q8N3P4 1428 aa36.51■■■■□ 3.43
LSM7-203ENST00000585409 CCDC141Q6ZP82 1450 aa36.48■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms