RNA–Protein interactions for RNA: ENST00000584122.1

TYMS-206, Transcript of thymidylate synthetase, humanhuman

TSL 4

Gene TYMS, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYMS-206ENST00000584122 FER1L4A9Z1Z3 1794 aa30.18■■■□□ 2.42
TYMS-206ENST00000584122 CEBPAP49715 358 aaPredicted RBP30.17■■■□□ 2.42
TYMS-206ENST00000584122 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.17■■■□□ 2.421e-8■■□□□ 12.9
TYMS-206ENST00000584122 ARHGEF12Q9NZN5 1544 aa30.17■■■□□ 2.42
TYMS-206ENST00000584122 HECW1Q76N89 1606 aa30.14■■■□□ 2.42
TYMS-206ENST00000584122 PREX1Q8TCU6 1659 aa30.14■■■□□ 2.41
TYMS-206ENST00000584122 SCAPERQ9BY12 1400 aa30.1■■■□□ 2.41
TYMS-206ENST00000584122 ATP10AO60312 1499 aa30.1■■■□□ 2.41
TYMS-206ENST00000584122 STRCQ7RTU9 1775 aa30.1■■■□□ 2.41
TYMS-206ENST00000584122 C9orf84Q5VXU9 1444 aa30.07■■■□□ 2.4
TYMS-206ENST00000584122 UHRF1BP1Q6BDS2 1440 aa30.07■■■□□ 2.4
TYMS-206ENST00000584122 PTPRTO14522 1441 aa30.05■■■□□ 2.4
TYMS-206ENST00000584122 PLCH2O75038 1416 aa30.02■■■□□ 2.4
TYMS-206ENST00000584122 RANGAP1P46060 587 aaPredicted RBP30■■■□□ 2.39
TYMS-206ENST00000584122 CSRNP3Q8WYN3 585 aa29.96■■■□□ 2.39
TYMS-206ENST00000584122 LTBP4Q8N2S1 1624 aa29.96■■■□□ 2.39
TYMS-206ENST00000584122 IQSEC2Q5JU85 1478 aa29.94■■■□□ 2.38
TYMS-206ENST00000584122 EEA1Q15075 1411 aa29.93■■■□□ 2.38
TYMS-206ENST00000584122 EFCAB2Q5VUJ9 269 aa29.92■■■□□ 2.38
TYMS-206ENST00000584122 SETD1BQ9UPS6 1966 aaKnown RBP29.91■■■□□ 2.38
TYMS-206ENST00000584122 CDK13Q14004 1512 aaKnown RBP29.86■■■□□ 2.37
TYMS-206ENST00000584122 ZNF518AQ6AHZ1 1483 aa29.85■■■□□ 2.37
TYMS-206ENST00000584122 AFAP1Q8N556 730 aa29.84■■■□□ 2.37
TYMS-206ENST00000584122 NCOA1Q15788 1441 aa29.82■■■□□ 2.36
TYMS-206ENST00000584122 TRAPPC8Q9Y2L5 1435 aa29.81■■■□□ 2.36
TYMS-206ENST00000584122 KDM5CP41229 1560 aa29.77■■■□□ 2.36
TYMS-206ENST00000584122 MYT1LQ9UL68 1186 aa29.77■■■□□ 2.36
TYMS-206ENST00000584122 ESF1Q9H501 851 aaKnown RBP29.76■■■□□ 2.35
TYMS-206ENST00000584122 REREQ9P2R6 1566 aa29.75■■■□□ 2.35
TYMS-206ENST00000584122 C3P01024 1663 aa29.75■■■□□ 2.35
TYMS-206ENST00000584122 DIP2CQ9Y2E4 1556 aa29.74■■■□□ 2.35
TYMS-206ENST00000584122 UBAP1LF5GYI3 381 aa29.74■■■□□ 2.35
TYMS-206ENST00000584122 MYO5CQ9NQX4 1742 aa29.71■■■□□ 2.35
TYMS-206ENST00000584122 AGLP35573 1532 aa29.69■■■□□ 2.34
TYMS-206ENST00000584122 MLH3Q9UHC1 1453 aa29.68■■■□□ 2.34
TYMS-206ENST00000584122 CDK11AQ9UQ88 783 aaPredicted RBP29.68■■■□□ 2.34
TYMS-206ENST00000584122 ZNF335Q9H4Z2 1342 aaPredicted RBP29.68■■■□□ 2.34
TYMS-206ENST00000584122 ARHGAP5Q13017 1502 aa29.67■■■□□ 2.34
TYMS-206ENST00000584122 CNTLNQ9NXG0 1405 aa29.66■■■□□ 2.34
TYMS-206ENST00000584122 ATP1B4Q9UN42 357 aaPredicted RBP29.65■■■□□ 2.34
TYMS-206ENST00000584122 CAMSAP1Q5T5Y3 1602 aa29.64■■■□□ 2.34
TYMS-206ENST00000584122 ABCA6Q8N139 1617 aa29.64■■■□□ 2.34
TYMS-206ENST00000584122 NCKAP5LQ9HCH0 1330 aa29.63■■■□□ 2.33
TYMS-206ENST00000584122 KIF14Q15058 1648 aa29.63■■■□□ 2.33
TYMS-206ENST00000584122 NPATQ14207 1427 aa29.62■■■□□ 2.33
TYMS-206ENST00000584122 TROQ12816 1431 aaPredicted RBP29.59■■■□□ 2.33
TYMS-206ENST00000584122 FMN1Q68DA7 1419 aa29.54■■■□□ 2.32
TYMS-206ENST00000584122 PKD2Q13563 968 aa29.53■■■□□ 2.32
TYMS-206ENST00000584122 CLIP1P30622 1438 aa29.53■■■□□ 2.32
TYMS-206ENST00000584122 ZMYM3Q14202 1370 aa29.52■■■□□ 2.32
TYMS-206ENST00000584122 HSPA1LP34931 641 aa29.5■■■□□ 2.31
TYMS-206ENST00000584122 PLA2R1Q13018 1463 aa29.49■■■□□ 2.31
TYMS-206ENST00000584122 MED1Q15648 1581 aaPredicted RBP29.47■■■□□ 2.31
TYMS-206ENST00000584122 ABCC1P33527 1531 aa29.47■■■□□ 2.31
TYMS-206ENST00000584122 TCOF1Q13428 1488 aaKnown RBP29.46■■■□□ 2.31
TYMS-206ENST00000584122 PPP6R1Q9UPN7 881 aa29.43■■■□□ 2.3
TYMS-206ENST00000584122 MROH2AA6NES4 1674 aa29.43■■■□□ 2.3
TYMS-206ENST00000584122 KIDINS220Q9ULH0 1771 aa29.42■■■□□ 2.3
TYMS-206ENST00000584122 CDC42BPBQ9Y5S2 1711 aa29.42■■■□□ 2.3
TYMS-206ENST00000584122 SCAF1Q9H7N4 1312 aaKnown RBP29.42■■■□□ 2.3
TYMS-206ENST00000584122 PIP4K2BP78356 416 aa29.4■■■□□ 2.3
TYMS-206ENST00000584122 ARHGAP35Q9NRY4 1499 aa29.38■■■□□ 2.29
TYMS-206ENST00000584122 ITSN2Q9NZM3 1697 aa29.37■■■□□ 2.29
TYMS-206ENST00000584122 PREX2Q70Z35 1606 aa29.37■■■□□ 2.29
TYMS-206ENST00000584122 PTPRKQ15262 1439 aa29.37■■■□□ 2.29
TYMS-206ENST00000584122 CEP170BQ9Y4F5 1589 aaPredicted RBP29.36■■■□□ 2.29
TYMS-206ENST00000584122 TOM1O60784 492 aa29.36■■■□□ 2.29
TYMS-206ENST00000584122 MYO3AQ8NEV4 1616 aa29.35■■■□□ 2.29
TYMS-206ENST00000584122 ZNF142P52746 1687 aaPredicted RBP29.35■■■□□ 2.29
TYMS-206ENST00000584122 PHF23Q9BUL5 403 aaPredicted RBP29.32■■■□□ 2.28
TYMS-206ENST00000584122 SAMD9LQ8IVG5 1584 aa29.31■■■□□ 2.28
TYMS-206ENST00000584122 SPAG9O60271 1321 aaKnown RBP29.3■■■□□ 2.28
TYMS-206ENST00000584122 UBTFP17480 764 aaKnown RBP29.3■■■□□ 2.28
TYMS-206ENST00000584122 CPS1P31327 1500 aa29.26■■■□□ 2.27
TYMS-206ENST00000584122 CLTCQ00610 1675 aaKnown RBP29.25■■■□□ 2.27
TYMS-206ENST00000584122 EHMT2Q96KQ7 1210 aa29.25■■■□□ 2.27
TYMS-206ENST00000584122 ZNF777Q9ULD5 760 aaPredicted RBP29.25■■■□□ 2.27
TYMS-206ENST00000584122 LRRIQ1Q96JM4 1722 aa29.23■■■□□ 2.27
TYMS-206ENST00000584122 GGT6Q6P531 493 aa29.23■■■□□ 2.27
TYMS-206ENST00000584122 A2ML1A8K2U0 1454 aa29.23■■■□□ 2.27
TYMS-206ENST00000584122 SUPT6HQ7KZ85 1726 aaKnown RBP29.22■■■□□ 2.27
TYMS-206ENST00000584122 SHANK2Q9UPX8 1470 aa29.22■■■□□ 2.27
TYMS-206ENST00000584122 PLXNC1O60486 1568 aa29.22■■■□□ 2.27
TYMS-206ENST00000584122 HNRNPMP52272 730 aaKnown RBP eCLIP29.21■■■□□ 2.27
TYMS-206ENST00000584122 A2MP01023 1474 aa29.21■■■□□ 2.27
TYMS-206ENST00000584122 SYCP2Q9BX26 1530 aa29.2■■■□□ 2.26
TYMS-206ENST00000584122 ATP7AQ04656 1500 aa29.18■■■□□ 2.26
TYMS-206ENST00000584122 CCDC18Q5T9S5 1454 aa29.17■■■□□ 2.26
TYMS-206ENST00000584122 CDC42BPAQ5VT25 1732 aa29.16■■■□□ 2.26
TYMS-206ENST00000584122 DNMT1P26358 1616 aaKnown RBP29.16■■■□□ 2.26
TYMS-206ENST00000584122 CASKIN1Q8WXD9 1431 aa29.13■■■□□ 2.25
TYMS-206ENST00000584122 KIAA1107Q9UPP5 1409 aa29.13■■■□□ 2.25
TYMS-206ENST00000584122 NEURL4Q96JN8 1562 aa29.13■■■□□ 2.25
TYMS-206ENST00000584122 GPATCH8Q9UKJ3 1502 aaKnown RBP29.12■■■□□ 2.25
TYMS-206ENST00000584122 INO80Q9ULG1 1556 aaPredicted RBP29.1■■■□□ 2.25
TYMS-206ENST00000584122 ALKQ9UM73 1620 aa29.1■■■□□ 2.25
TYMS-206ENST00000584122 LOC105371045A0A1W2PR82 267 aa29.07■■■□□ 2.24
TYMS-206ENST00000584122 ANKLE2Q86XL3 938 aa29.07■■■□□ 2.24
TYMS-206ENST00000584122 VWDEQ8N2E2 1590 aa29.06■■■□□ 2.24
TYMS-206ENST00000584122 PLEKHH2Q8IVE3 1493 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms