RNA–Protein interactions for RNA: ENST00000584122.1

TYMS-206, Transcript of thymidylate synthetase, humanhuman

TSL 4

Gene TYMS, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYMS-206ENST00000584122 NISCHQ9Y2I1 1504 aa45.43■■■■■ 4.86
TYMS-206ENST00000584122 ABCC9O60706 1549 aa42.15■■■■■ 4.34
TYMS-206ENST00000584122 CCDC180Q9P1Z9 1646 aa41.07■■■■■ 4.17
TYMS-206ENST00000584122 DNAJC5BQ9UF47 199 aa40.5■■■■■ 4.07
TYMS-206ENST00000584122 RB1CC1Q8TDY2 1594 aa39.63■■■■□ 3.94
TYMS-206ENST00000584122 PABPN1Q86U42 306 aaKnown RBP eCLIP39.15■■■■□ 3.86
TYMS-206ENST00000584122 NACADO15069 1562 aa39.15■■■■□ 3.86
TYMS-206ENST00000584122 DCAF8L2P0C7V8 631 aa38.81■■■■□ 3.8
TYMS-206ENST00000584122 UNC13AQ9UPW8 1703 aa38.58■■■■□ 3.77
TYMS-206ENST00000584122 BICRAQ9NZM4 1560 aa38.54■■■■□ 3.76
TYMS-206ENST00000584122 MYO15BQ96JP2 1530 aa38.33■■■■□ 3.73
TYMS-206ENST00000584122 CECR2Q9BXF3 1484 aa38.09■■■■□ 3.69
TYMS-206ENST00000584122 CC2D2AQ9P2K1 1620 aa37.97■■■■□ 3.67
TYMS-206ENST00000584122 SHROOM4Q9ULL8 1493 aa37.95■■■■□ 3.67
TYMS-206ENST00000584122 DNAJC5Q9H3Z4 198 aa37.9■■■■□ 3.66
TYMS-206ENST00000584122 EIF4G1Q04637 1599 aaKnown RBP37.68■■■■□ 3.62
TYMS-206ENST00000584122 DCAF1Q9Y4B6 1507 aa37.46■■■■□ 3.59
TYMS-206ENST00000584122 ZCCHC6Q5VYS8 1495 aaKnown RBP37.44■■■■□ 3.58
TYMS-206ENST00000584122 SCRIBQ14160 1630 aa37.41■■■■□ 3.58
TYMS-206ENST00000584122 CUX2O14529 1486 aa36.73■■■■□ 3.47
TYMS-206ENST00000584122 ERCC6Q03468 1493 aa36.46■■■■□ 3.43
TYMS-206ENST00000584122 NCAPD3P42695 1498 aa36.23■■■■□ 3.39
TYMS-206ENST00000584122 ATAD2BQ9ULI0 1458 aa35.96■■■■□ 3.35
TYMS-206ENST00000584122 NESP48681 1621 aa35.93■■■■□ 3.34
TYMS-206ENST00000584122 HMGXB3Q12766 1538 aa35.79■■■■□ 3.32
TYMS-206ENST00000584122 TRIM41Q8WV44 630 aa35.79■■■■□ 3.32
TYMS-206ENST00000584122 SMARCA2P51531 1590 aa35.76■■■■□ 3.31
TYMS-206ENST00000584122 THOC2Q8NI27 1593 aaKnown RBP35.7■■■■□ 3.31
TYMS-206ENST00000584122 SMARCA4P51532 1647 aa35.59■■■■□ 3.29
TYMS-206ENST00000584122 BAZ1BQ9UIG0 1483 aaKnown RBP35.53■■■■□ 3.28
TYMS-206ENST00000584122 LAMC3Q9Y6N6 1575 aa35.47■■■■□ 3.27
TYMS-206ENST00000584122 PDS5BQ9NTI5 1447 aa35.38■■■■□ 3.25
TYMS-206ENST00000584122 BAZ1AQ9NRL2 1556 aaPredicted RBP35.3■■■■□ 3.24
TYMS-206ENST00000584122 KIF21AQ7Z4S6 1674 aa35.3■■■■□ 3.24
TYMS-206ENST00000584122 PEG3Q9GZU2 1588 aa35.29■■■■□ 3.24
TYMS-206ENST00000584122 MRC2Q9UBG0 1479 aa35.1■■■■□ 3.21
TYMS-206ENST00000584122 CADPSQ9ULU8 1353 aa35.08■■■■□ 3.21
TYMS-206ENST00000584122 WDR62O43379 1518 aa35.03■■■■□ 3.2
TYMS-206ENST00000584122 MROH2BQ7Z745 1585 aa35■■■■□ 3.19
TYMS-206ENST00000584122 OSCARQ8IYS5 282 aa34.94■■■■□ 3.18
TYMS-206ENST00000584122 CEP164Q9UPV0 1460 aa34.76■■■■□ 3.15
TYMS-206ENST00000584122 FANCD2Q9BXW9 1451 aa34.65■■■■□ 3.14
TYMS-206ENST00000584122 RIMBP3CA6NJZ7 1639 aa34.48■■■■□ 3.11
TYMS-206ENST00000584122 RIMBP3BA6NNM3 1639 aa34.48■■■■□ 3.11
TYMS-206ENST00000584122 RIMBP3Q9UFD9 1639 aa34.48■■■■□ 3.11
TYMS-206ENST00000584122 CFTRP13569 1480 aa34.46■■■■□ 3.11
TYMS-206ENST00000584122 WIZO95785 1651 aa34.44■■■■□ 3.1
TYMS-206ENST00000584122 URB2Q14146 1524 aaKnown RBP34.43■■■■□ 3.1
TYMS-206ENST00000584122 ARHGEF11O15085 1522 aa34.33■■■■□ 3.09
TYMS-206ENST00000584122 CYB5RLQ6IPT4 315 aa34.2■■■■□ 3.07
TYMS-206ENST00000584122 ZNF608Q9ULD9 1512 aaPredicted RBP34.18■■■■□ 3.06
TYMS-206ENST00000584122 IFT140Q96RY7 1462 aa34.13■■■■□ 3.05
TYMS-206ENST00000584122 TRHP20396 242 aaPredicted RBP34.11■■■■□ 3.05
TYMS-206ENST00000584122 TOP2AP11388 1531 aaKnown RBP33.99■■■■□ 3.03
TYMS-206ENST00000584122 RSF1Q96T23 1441 aaPredicted RBP33.96■■■■□ 3.03
TYMS-206ENST00000584122 ARAP1Q96P48 1450 aa33.94■■■■□ 3.02
TYMS-206ENST00000584122 TOPBP1Q92547 1522 aa33.88■■■■□ 3.01
TYMS-206ENST00000584122 EIF4G3O43432 1585 aaKnown RBP33.85■■■■□ 3.01
TYMS-206ENST00000584122 AEBP2Q6ZN18 517 aaPredicted RBP33.83■■■■□ 3.01
TYMS-206ENST00000584122 PRDM2Q13029 1718 aa33.79■■■■□ 3
TYMS-206ENST00000584122 AQRO60306 1485 aaKnown RBP eCLIP33.76■■■□□ 2.991e-7■■■■■ 30.9
TYMS-206ENST00000584122 FBLN2P98095 1184 aa33.74■■■□□ 2.99
TYMS-206ENST00000584122 ABCC8Q09428 1581 aa33.73■■■□□ 2.99
TYMS-206ENST00000584122 CHD1O14646 1710 aa33.7■■■□□ 2.99
TYMS-206ENST00000584122 CCDC88BA6NC98 1476 aa33.67■■■□□ 2.98
TYMS-206ENST00000584122 DNMBPQ6XZF7 1577 aa33.63■■■□□ 2.97
TYMS-206ENST00000584122 TARBP1Q13395 1621 aaKnown RBP33.61■■■□□ 2.97
TYMS-206ENST00000584122 POLA1P09884 1462 aaPredicted RBP33.48■■■□□ 2.95
TYMS-206ENST00000584122 CLASP1Q7Z460 1538 aa33.42■■■□□ 2.94
TYMS-206ENST00000584122 TDRD9Q8NDG6 1382 aaKnown RBP33.41■■■□□ 2.94
TYMS-206ENST00000584122 RAD54L2Q9Y4B4 1467 aa33.38■■■□□ 2.93
TYMS-206ENST00000584122 SNAPC4Q5SXM2 1469 aa33.35■■■□□ 2.93
TYMS-206ENST00000584122 CHMP7Q8WUX9 453 aaPredicted RBP33.34■■■□□ 2.93
TYMS-206ENST00000584122 SOGA1O94964 1423 aa33.33■■■□□ 2.93
TYMS-206ENST00000584122 SYNJ1O43426 1573 aa33.29■■■□□ 2.92
TYMS-206ENST00000584122 MAGI1Q96QZ7 1491 aaPredicted RBP33.23■■■□□ 2.91
TYMS-206ENST00000584122 WDR97A6NE52 1622 aa33.18■■■□□ 2.9
TYMS-206ENST00000584122 GAPVD1Q14C86 1478 aa33.18■■■□□ 2.9
TYMS-206ENST00000584122 SYNJ2O15056 1496 aa33.14■■■□□ 2.9
TYMS-206ENST00000584122 GRIN2BQ13224 1484 aa33.13■■■□□ 2.89
TYMS-206ENST00000584122 FGD5Q6ZNL6 1462 aa33.12■■■□□ 2.89
TYMS-206ENST00000584122 CUX1P39880 1505 aa32.93■■■□□ 2.86
TYMS-206ENST00000584122 ERCC6L2Q5T890 1561 aa32.83■■■□□ 2.85
TYMS-206ENST00000584122 PBRM1Q86U86 1689 aa32.77■■■□□ 2.84
TYMS-206ENST00000584122 GRIN2AQ12879 1464 aa32.7■■■□□ 2.83
TYMS-206ENST00000584122 ABCA10Q8WWZ4 1543 aa32.7■■■□□ 2.83
TYMS-206ENST00000584122 CEP170Q5SW79 1584 aa32.68■■■□□ 2.82
TYMS-206ENST00000584122 ABCA5Q8WWZ7 1642 aa32.67■■■□□ 2.82
TYMS-206ENST00000584122 NUP160Q12769 1436 aa32.66■■■□□ 2.82
TYMS-206ENST00000584122 KIF13AQ9H1H9 1805 aa32.56■■■□□ 2.8
TYMS-206ENST00000584122 SHROOM2Q13796 1616 aa32.54■■■□□ 2.8
TYMS-206ENST00000584122 ADAMTS12P58397 1594 aa32.51■■■□□ 2.79
TYMS-206ENST00000584122 ILDR1Q86SU0 546 aaPredicted RBP32.49■■■□□ 2.79
TYMS-206ENST00000584122 FAM69CQ0P6D2 419 aa32.48■■■□□ 2.79
TYMS-206ENST00000584122 KDM4FA0A1W2PPD8 638 aa32.46■■■□□ 2.79
TYMS-206ENST00000584122 FHAD1B1AJZ9 1412 aa32.44■■■□□ 2.78
TYMS-206ENST00000584122 ABCC10Q5T3U5 1492 aa32.43■■■□□ 2.78
TYMS-206ENST00000584122 PRG4Q92954 1404 aaPredicted RBP32.43■■■□□ 2.78
TYMS-206ENST00000584122 WRNQ14191 1432 aaPredicted RBP eCLIP32.4■■■□□ 2.78
TYMS-206ENST00000584122 JPH4Q96JJ6 628 aa32.34■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms