RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 PREX1Q8TCU6 1659 aa21.47■■□□□ 1.03
CSNK1D-218ENST00000581655 RANGAP1P46060 587 aaPredicted RBP21.45■■□□□ 1.02
CSNK1D-218ENST00000581655 ARHGEF12Q9NZN5 1544 aa21.43■■□□□ 1.02
CSNK1D-218ENST00000581655 CEBPAP49715 358 aaPredicted RBP21.42■■□□□ 1.02
CSNK1D-218ENST00000581655 STRCQ7RTU9 1775 aa21.41■■□□□ 1.02
CSNK1D-218ENST00000581655 SCAPERQ9BY12 1400 aa21.41■■□□□ 1.02
CSNK1D-218ENST00000581655 DMRT2Q9Y5R5 561 aa21.4■■□□□ 1.02
CSNK1D-218ENST00000581655 SPATA31D1Q6ZQQ2 1576 aa21.4■■□□□ 1.02
CSNK1D-218ENST00000581655 CSRNP3Q8WYN3 585 aa21.39■■□□□ 1.01
CSNK1D-218ENST00000581655 ATP10AO60312 1499 aa21.39■■□□□ 1.01
CSNK1D-218ENST00000581655 C9orf84Q5VXU9 1444 aa21.37■■□□□ 1.01
CSNK1D-218ENST00000581655 PLCH2O75038 1416 aa21.35■■□□□ 1.01
CSNK1D-218ENST00000581655 UHRF1BP1Q6BDS2 1440 aa21.35■■□□□ 1.01
CSNK1D-218ENST00000581655 SETD1BQ9UPS6 1966 aaKnown RBP21.34■■□□□ 1.01
CSNK1D-218ENST00000581655 CDK13Q14004 1512 aaKnown RBP21.33■■□□□ 1
CSNK1D-218ENST00000581655 PTPRTO14522 1441 aa21.28■■□□□ 1
CSNK1D-218ENST00000581655 EFCAB2Q5VUJ9 269 aa21.27■■□□□ 1
CSNK1D-218ENST00000581655 MYO5CQ9NQX4 1742 aa21.26■□□□□ 0.99
CSNK1D-218ENST00000581655 LTBP4Q8N2S1 1624 aa21.24■□□□□ 0.99
CSNK1D-218ENST00000581655 ZNF518AQ6AHZ1 1483 aa21.23■□□□□ 0.99
CSNK1D-218ENST00000581655 C3P01024 1663 aa21.22■□□□□ 0.99
CSNK1D-218ENST00000581655 AFAP1Q8N556 730 aa21.21■□□□□ 0.99
CSNK1D-218ENST00000581655 MYT1LQ9UL68 1186 aa21.21■□□□□ 0.99
CSNK1D-218ENST00000581655 KDM5CP41229 1560 aa21.2■□□□□ 0.98
CSNK1D-218ENST00000581655 DIP2CQ9Y2E4 1556 aa21.2■□□□□ 0.98
CSNK1D-218ENST00000581655 IQSEC2Q5JU85 1478 aa21.19■□□□□ 0.98
CSNK1D-218ENST00000581655 ATP1B4Q9UN42 357 aaPredicted RBP21.18■□□□□ 0.98
CSNK1D-218ENST00000581655 KIF14Q15058 1648 aa21.17■□□□□ 0.98
CSNK1D-218ENST00000581655 REREQ9P2R6 1566 aa21.16■□□□□ 0.98
CSNK1D-218ENST00000581655 ARHGAP5Q13017 1502 aa21.16■□□□□ 0.98
CSNK1D-218ENST00000581655 EEA1Q15075 1411 aa21.16■□□□□ 0.98
CSNK1D-218ENST00000581655 NCOA1Q15788 1441 aa21.15■□□□□ 0.98
CSNK1D-218ENST00000581655 TRAPPC8Q9Y2L5 1435 aa21.15■□□□□ 0.98
CSNK1D-218ENST00000581655 ESF1Q9H501 851 aaKnown RBP21.15■□□□□ 0.98
CSNK1D-218ENST00000581655 ABCA6Q8N139 1617 aa21.15■□□□□ 0.98
CSNK1D-218ENST00000581655 CDK11AQ9UQ88 783 aaPredicted RBP21.12■□□□□ 0.97
CSNK1D-218ENST00000581655 AGLP35573 1532 aa21.11■□□□□ 0.97
CSNK1D-218ENST00000581655 MLH3Q9UHC1 1453 aa21.1■□□□□ 0.97
CSNK1D-218ENST00000581655 TROQ12816 1431 aaPredicted RBP21.09■□□□□ 0.97
CSNK1D-218ENST00000581655 FMN1Q68DA7 1419 aa21.08■□□□□ 0.97
CSNK1D-218ENST00000581655 CAMSAP1Q5T5Y3 1602 aa21.07■□□□□ 0.96
CSNK1D-218ENST00000581655 UBAP1LF5GYI3 381 aa21.06■□□□□ 0.96
CSNK1D-218ENST00000581655 CDC42BPBQ9Y5S2 1711 aa21.06■□□□□ 0.96
CSNK1D-218ENST00000581655 CLIP1P30622 1438 aa21.05■□□□□ 0.96
CSNK1D-218ENST00000581655 CNTLNQ9NXG0 1405 aa21.05■□□□□ 0.96
CSNK1D-218ENST00000581655 ZNF335Q9H4Z2 1342 aaPredicted RBP21.04■□□□□ 0.96
CSNK1D-218ENST00000581655 NCKAP5LQ9HCH0 1330 aa21.03■□□□□ 0.96
CSNK1D-218ENST00000581655 ABCC1P33527 1531 aa21.02■□□□□ 0.96
CSNK1D-218ENST00000581655 KIDINS220Q9ULH0 1771 aa21.02■□□□□ 0.96
CSNK1D-218ENST00000581655 NPATQ14207 1427 aa21.01■□□□□ 0.95
CSNK1D-218ENST00000581655 ITSN2Q9NZM3 1697 aa21■□□□□ 0.95
CSNK1D-218ENST00000581655 ARHGAP35Q9NRY4 1499 aa21■□□□□ 0.95
CSNK1D-218ENST00000581655 LRRIQ1Q96JM4 1722 aa20.99■□□□□ 0.95
CSNK1D-218ENST00000581655 PREX2Q70Z35 1606 aa20.99■□□□□ 0.95
CSNK1D-218ENST00000581655 MROH2AA6NES4 1674 aa20.99■□□□□ 0.95
CSNK1D-218ENST00000581655 EHMT2Q96KQ7 1210 aa20.98■□□□□ 0.95
CSNK1D-218ENST00000581655 ZMYM3Q14202 1370 aa20.97■□□□□ 0.95
CSNK1D-218ENST00000581655 UBTFP17480 764 aaKnown RBP20.95■□□□□ 0.94
CSNK1D-218ENST00000581655 PKD2Q13563 968 aa20.93■□□□□ 0.94
CSNK1D-218ENST00000581655 PLA2R1Q13018 1463 aa20.93■□□□□ 0.94
CSNK1D-218ENST00000581655 ZNF142P52746 1687 aaPredicted RBP20.93■□□□□ 0.94
CSNK1D-218ENST00000581655 SUPT6HQ7KZ85 1726 aaKnown RBP20.92■□□□□ 0.94
CSNK1D-218ENST00000581655 MYO3AQ8NEV4 1616 aa20.92■□□□□ 0.94
CSNK1D-218ENST00000581655 SAMD9LQ8IVG5 1584 aa20.9■□□□□ 0.94
CSNK1D-218ENST00000581655 TCOF1Q13428 1488 aaKnown RBP20.9■□□□□ 0.94
CSNK1D-218ENST00000581655 CDC42BPAQ5VT25 1732 aa20.9■□□□□ 0.94
CSNK1D-218ENST00000581655 CLTCQ00610 1675 aaKnown RBP20.89■□□□□ 0.94
CSNK1D-218ENST00000581655 MED1Q15648 1581 aaPredicted RBP20.89■□□□□ 0.94
CSNK1D-218ENST00000581655 CEP170BQ9Y4F5 1589 aaPredicted RBP20.89■□□□□ 0.94
CSNK1D-218ENST00000581655 SCAF1Q9H7N4 1312 aaKnown RBP20.88■□□□□ 0.93
CSNK1D-218ENST00000581655 HSPA1LP34931 641 aa20.88■□□□□ 0.93
CSNK1D-218ENST00000581655 PPP6R1Q9UPN7 881 aa20.88■□□□□ 0.93
CSNK1D-218ENST00000581655 ZNF777Q9ULD5 760 aaPredicted RBP20.86■□□□□ 0.93
CSNK1D-218ENST00000581655 PTPRKQ15262 1439 aa20.86■□□□□ 0.93
CSNK1D-218ENST00000581655 SPAG9O60271 1321 aaKnown RBP20.85■□□□□ 0.93
CSNK1D-218ENST00000581655 PIP4K2BP78356 416 aa20.85■□□□□ 0.93
CSNK1D-218ENST00000581655 SYCP2Q9BX26 1530 aa20.84■□□□□ 0.93
CSNK1D-218ENST00000581655 CCDC18Q5T9S5 1454 aa20.82■□□□□ 0.92
CSNK1D-218ENST00000581655 HNRNPMP52272 730 aaKnown RBP eCLIP20.81■□□□□ 0.921e-7■■■■■ 34.8
CSNK1D-218ENST00000581655 GGT6Q6P531 493 aa20.81■□□□□ 0.92
CSNK1D-218ENST00000581655 ATP7AQ04656 1500 aa20.81■□□□□ 0.92
CSNK1D-218ENST00000581655 PLXNC1O60486 1568 aa20.8■□□□□ 0.92
CSNK1D-218ENST00000581655 A2MP01023 1474 aa20.8■□□□□ 0.92
CSNK1D-218ENST00000581655 TOM1O60784 492 aa20.79■□□□□ 0.92
CSNK1D-218ENST00000581655 CASKIN1Q8WXD9 1431 aa20.78■□□□□ 0.92
CSNK1D-218ENST00000581655 INO80Q9ULG1 1556 aaPredicted RBP20.77■□□□□ 0.92
CSNK1D-218ENST00000581655 A2ML1A8K2U0 1454 aa20.77■□□□□ 0.92
CSNK1D-218ENST00000581655 DNMT1P26358 1616 aaKnown RBP20.77■□□□□ 0.92
CSNK1D-218ENST00000581655 CPS1P31327 1500 aa20.76■□□□□ 0.91
CSNK1D-218ENST00000581655 GPATCH8Q9UKJ3 1502 aaKnown RBP20.75■□□□□ 0.91
CSNK1D-218ENST00000581655 PHF23Q9BUL5 403 aaPredicted RBP20.75■□□□□ 0.91
CSNK1D-218ENST00000581655 POLR1AO95602 1720 aaPredicted RBP20.74■□□□□ 0.91
CSNK1D-218ENST00000581655 SHANK2Q9UPX8 1470 aa20.73■□□□□ 0.91
CSNK1D-218ENST00000581655 NEURL4Q96JN8 1562 aa20.72■□□□□ 0.91
CSNK1D-218ENST00000581655 KIAA1107Q9UPP5 1409 aa20.71■□□□□ 0.91
CSNK1D-218ENST00000581655 PLEKHH2Q8IVE3 1493 aa20.7■□□□□ 0.9
CSNK1D-218ENST00000581655 CFDP1Q9UEE9 299 aaPredicted RBP20.69■□□□□ 0.9
CSNK1D-218ENST00000581655 ADGBQ8N7X0 1667 aa20.68■□□□□ 0.9
CSNK1D-218ENST00000581655 FYCO1Q9BQS8 1478 aa20.67■□□□□ 0.9
CSNK1D-218ENST00000581655 TNRQ92752 1358 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms