RNA–Protein interactions for RNA: ENST00000581497.1

SRSF1-203, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-203ENST00000581497 PDCD7Q8N8D1 485 aaKnown RBP14.27□□□□□ -0.13
SRSF1-203ENST00000581497 TMEM121BQ9BXQ6 578 aaPredicted RBP14.25□□□□□ -0.13
SRSF1-203ENST00000581497 PSEN1P49768 467 aa14.23□□□□□ -0.13
SRSF1-203ENST00000581497 C3orf67Q6ZVT6 689 aa14.21□□□□□ -0.13
SRSF1-203ENST00000581497 L3MBTL3Q96JM7 780 aaPredicted RBP14.2□□□□□ -0.14
SRSF1-203ENST00000581497 PRDM2Q13029 1718 aa14.19□□□□□ -0.14
SRSF1-203ENST00000581497 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.19□□□□□ -0.142e-43■■■□□ 19.2
SRSF1-203ENST00000581497 ABCC8Q09428 1581 aa14.17□□□□□ -0.14
SRSF1-203ENST00000581497 TOPBP1Q92547 1522 aa14.16□□□□□ -0.14
SRSF1-203ENST00000581497 IFT140Q96RY7 1462 aa14.16□□□□□ -0.14
SRSF1-203ENST00000581497 MARVELD3Q96A59 401 aa14.15□□□□□ -0.14
SRSF1-203ENST00000581497 PDAP1Q13442 181 aaKnown RBP14.14□□□□□ -0.15
SRSF1-203ENST00000581497 SPOCK2Q92563 424 aa14.14□□□□□ -0.15
SRSF1-203ENST00000581497 IFNLR1Q8IU57 520 aaPredicted RBP14.12□□□□□ -0.15
SRSF1-203ENST00000581497 CIZ1Q9ULV3 898 aaPredicted RBP14.11□□□□□ -0.15
SRSF1-203ENST00000581497 DNMBPQ6XZF7 1577 aa14.1□□□□□ -0.15
SRSF1-203ENST00000581497 ILDR1Q86SU0 546 aaPredicted RBP14.09□□□□□ -0.15
SRSF1-203ENST00000581497 ZNF608Q9ULD9 1512 aaPredicted RBP14.09□□□□□ -0.15
SRSF1-203ENST00000581497 SUPT5HO00267 1087 aaKnown RBP14.07□□□□□ -0.16
SRSF1-203ENST00000581497 TRIM41Q8WV44 630 aa14.07□□□□□ -0.16
SRSF1-203ENST00000581497 CABP2Q9NPB3 220 aa14.06□□□□□ -0.16
SRSF1-203ENST00000581497 SPNS2Q8IVW8 549 aa14.05□□□□□ -0.16
SRSF1-203ENST00000581497 EMP3P54852 163 aa14.04□□□□□ -0.16
SRSF1-203ENST00000581497 DPY19L2Q6NUT2 758 aa14.04□□□□□ -0.16
SRSF1-203ENST00000581497 MMRN1Q13201 1228 aa14.03□□□□□ -0.16
SRSF1-203ENST00000581497 POLA1P09884 1462 aaPredicted RBP14.02□□□□□ -0.16
SRSF1-203ENST00000581497 AQRO60306 1485 aaKnown RBP eCLIP14□□□□□ -0.173e-9■■□□□ 11.6
SRSF1-203ENST00000581497 G3V3G9 751 aa14□□□□□ -0.17
SRSF1-203ENST00000581497 SOGA1O94964 1423 aa13.99□□□□□ -0.17
SRSF1-203ENST00000581497 TARBP1Q13395 1621 aaKnown RBP13.99□□□□□ -0.17
SRSF1-203ENST00000581497 EIF4G3O43432 1585 aaKnown RBP13.99□□□□□ -0.17
SRSF1-203ENST00000581497 BOLA1Q9Y3E2 137 aa13.98□□□□□ -0.17
SRSF1-203ENST00000581497 RAD54L2Q9Y4B4 1467 aa13.97□□□□□ -0.17
SRSF1-203ENST00000581497 FGD5Q6ZNL6 1462 aa13.95□□□□□ -0.18
SRSF1-203ENST00000581497 HS3ST6Q96QI5 342 aa13.95□□□□□ -0.18
SRSF1-203ENST00000581497 TDRD9Q8NDG6 1382 aaKnown RBP13.95□□□□□ -0.18
SRSF1-203ENST00000581497 CUX1P39880 1505 aa13.94□□□□□ -0.18
SRSF1-203ENST00000581497 FAM205CA6NFA0 338 aa13.93□□□□□ -0.18
SRSF1-203ENST00000581497 POTEB3A0JP26 581 aa13.91□□□□□ -0.18
SRSF1-203ENST00000581497 POTEBQ6S5H4 581 aa13.91□□□□□ -0.18
SRSF1-203ENST00000581497 HOXB3P14651 431 aaPredicted RBP13.88□□□□□ -0.19
SRSF1-203ENST00000581497 KRTAP3-3Q9BYR6 98 aa13.88□□□□□ -0.19
SRSF1-203ENST00000581497 KRTAP3-2Q9BYR7 98 aa13.88□□□□□ -0.19
SRSF1-203ENST00000581497 WDR97A6NE52 1622 aa13.88□□□□□ -0.19
SRSF1-203ENST00000581497 ARHGEF11O15085 1522 aa13.86□□□□□ -0.19
SRSF1-203ENST00000581497 EFCAB3Q8N7B9 438 aa13.86□□□□□ -0.19
SRSF1-203ENST00000581497 CHMP7Q8WUX9 453 aaPredicted RBP13.86□□□□□ -0.19
SRSF1-203ENST00000581497 GRIN2BQ13224 1484 aa13.86□□□□□ -0.19
SRSF1-203ENST00000581497 RIMBP3CA6NJZ7 1639 aa13.85□□□□□ -0.19
SRSF1-203ENST00000581497 RIMBP3BA6NNM3 1639 aa13.85□□□□□ -0.19
SRSF1-203ENST00000581497 RIMBP3Q9UFD9 1639 aa13.85□□□□□ -0.19
SRSF1-203ENST00000581497 SNAPC4Q5SXM2 1469 aa13.85□□□□□ -0.19
SRSF1-203ENST00000581497 MAGI1Q96QZ7 1491 aaPredicted RBP13.84□□□□□ -0.19
SRSF1-203ENST00000581497 CHD1O14646 1710 aa13.82□□□□□ -0.2
SRSF1-203ENST00000581497 ZNF710Q8N1W2 664 aa13.82□□□□□ -0.2
SRSF1-203ENST00000581497 GAPVD1Q14C86 1478 aa13.81□□□□□ -0.2
SRSF1-203ENST00000581497 ABCA10Q8WWZ4 1543 aa13.81□□□□□ -0.2
SRSF1-203ENST00000581497 DOK7Q18PE1 504 aa13.81□□□□□ -0.2
SRSF1-203ENST00000581497 WRNQ14191 1432 aaPredicted RBP eCLIP13.81□□□□□ -0.2
SRSF1-203ENST00000581497 HOXB1P14653 301 aaPredicted RBP13.8□□□□□ -0.2
SRSF1-203ENST00000581497 CYB5RLQ6IPT4 315 aa13.8□□□□□ -0.2
SRSF1-203ENST00000581497 SYNJ2O15056 1496 aa13.79□□□□□ -0.2
SRSF1-203ENST00000581497 SYNJ1O43426 1573 aa13.75□□□□□ -0.21
SRSF1-203ENST00000581497 MICALL2Q8IY33 904 aa13.74□□□□□ -0.21
SRSF1-203ENST00000581497 ARAP1Q96P48 1450 aa13.74□□□□□ -0.21
SRSF1-203ENST00000581497 ERBB3P21860 1342 aa13.73□□□□□ -0.21
SRSF1-203ENST00000581497 TOP2BQ02880 1626 aa13.73□□□□□ -0.21
SRSF1-203ENST00000581497 RIOK3O14730 519 aaKnown RBP13.73□□□□□ -0.21
SRSF1-203ENST00000581497 RIMBP2O15034 1052 aa13.73□□□□□ -0.21
SRSF1-203ENST00000581497 CLASP1Q7Z460 1538 aa13.73□□□□□ -0.21
SRSF1-203ENST00000581497 ABCA5Q8WWZ7 1642 aa13.72□□□□□ -0.21
SRSF1-203ENST00000581497 SOX12O15370 315 aa13.71□□□□□ -0.21
SRSF1-203ENST00000581497 RNF25Q96BH1 459 aaPredicted RBP13.71□□□□□ -0.21
SRSF1-203ENST00000581497 BIVM-ERCC5R4GMW8 1640 aa13.71□□□□□ -0.22
SRSF1-203ENST00000581497 PBRM1Q86U86 1689 aa13.7□□□□□ -0.22
SRSF1-203ENST00000581497 TMEM92Q6UXU6 159 aa13.7□□□□□ -0.22
SRSF1-203ENST00000581497 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.69□□□□□ -0.22
SRSF1-203ENST00000581497 ZFP91Q96JP5 570 aaPredicted RBP13.69□□□□□ -0.22
SRSF1-203ENST00000581497 VGFO15240 615 aaPredicted RBP13.68□□□□□ -0.22
SRSF1-203ENST00000581497 MS4A4AQ96JQ5 239 aa13.67□□□□□ -0.22
SRSF1-203ENST00000581497 GRIN2AQ12879 1464 aa13.66□□□□□ -0.22
SRSF1-203ENST00000581497 FHAD1B1AJZ9 1412 aa13.65□□□□□ -0.22
SRSF1-203ENST00000581497 PHF8Q9UPP1 1060 aa13.65□□□□□ -0.22
SRSF1-203ENST00000581497 VARS2Q5ST30 1063 aaKnown RBP13.64□□□□□ -0.23
SRSF1-203ENST00000581497 ZSWIM6Q9HCJ5 1215 aa13.64□□□□□ -0.23
SRSF1-203ENST00000581497 ERICH3Q5RHP9 1530 aa13.64□□□□□ -0.23
SRSF1-203ENST00000581497 ADAMTS12P58397 1594 aa13.62□□□□□ -0.23
SRSF1-203ENST00000581497 NUP160Q12769 1436 aa13.62□□□□□ -0.23
SRSF1-203ENST00000581497 GPR153Q6NV75 609 aa13.57□□□□□ -0.24
SRSF1-203ENST00000581497 CEP170Q5SW79 1584 aa13.57□□□□□ -0.24
SRSF1-203ENST00000581497 NLRP6P59044 892 aa13.54□□□□□ -0.24
SRSF1-203ENST00000581497 ZNF687Q8N1G0 1237 aa13.54□□□□□ -0.24
SRSF1-203ENST00000581497 KIF27Q86VH2 1401 aa13.54□□□□□ -0.24
SRSF1-203ENST00000581497 RNF166Q96A37 237 aaPredicted RBP13.53□□□□□ -0.24
SRSF1-203ENST00000581497 JPH4Q96JJ6 628 aa13.52□□□□□ -0.25
SRSF1-203ENST00000581497 IGF1RP08069 1367 aa13.51□□□□□ -0.25
SRSF1-203ENST00000581497 BCL11BQ9C0K0 894 aaPredicted RBP13.51□□□□□ -0.25
SRSF1-203ENST00000581497 TAOK2Q9UL54 1235 aa13.51□□□□□ -0.25
SRSF1-203ENST00000581497 ERCC6L2Q5T890 1561 aa13.5□□□□□ -0.25
SRSF1-203ENST00000581497 FBXO22Q8NEZ5 403 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms