RNA–Protein interactions for RNA: ENST00000580755.1

RPL23A-208, Transcript of ribosomal protein L23a, humanhuman

TSL 2

Gene RPL23A, Length 412 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL23A-208ENST00000580755 ARHGEF12Q9NZN5 1544 aa26.93■■□□□ 1.9
RPL23A-208ENST00000580755 EEA1Q15075 1411 aa26.92■■□□□ 1.9
RPL23A-208ENST00000580755 UHRF1BP1Q6BDS2 1440 aa26.92■■□□□ 1.9
RPL23A-208ENST00000580755 MLECQ14165 292 aa26.91■■□□□ 1.9
RPL23A-208ENST00000580755 RAPGEF6Q8TEU7 1601 aa26.88■■□□□ 1.89
RPL23A-208ENST00000580755 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.83■■□□□ 1.89
RPL23A-208ENST00000580755 HNRNPUL2Q1KMD3 747 aaKnown RBP26.83■■□□□ 1.89
RPL23A-208ENST00000580755 SETD1BQ9UPS6 1966 aaKnown RBP26.83■■□□□ 1.89
RPL23A-208ENST00000580755 NUP153P49790 1475 aaKnown RBP26.81■■□□□ 1.88
RPL23A-208ENST00000580755 HECW1Q76N89 1606 aa26.79■■□□□ 1.88
RPL23A-208ENST00000580755 CEBPAP49715 358 aaPredicted RBP26.78■■□□□ 1.88
RPL23A-208ENST00000580755 C9orf84Q5VXU9 1444 aa26.75■■□□□ 1.87
RPL23A-208ENST00000580755 ATP10AO60312 1499 aa26.74■■□□□ 1.87
RPL23A-208ENST00000580755 PLEKHD1A6NEE1 506 aa26.73■■□□□ 1.87
RPL23A-208ENST00000580755 RANGAP1P46060 587 aaPredicted RBP26.73■■□□□ 1.87
RPL23A-208ENST00000580755 MED1Q15648 1581 aaPredicted RBP26.71■■□□□ 1.87
RPL23A-208ENST00000580755 NCOA1Q15788 1441 aa26.69■■□□□ 1.86
RPL23A-208ENST00000580755 UBAP1LF5GYI3 381 aa26.68■■□□□ 1.86
RPL23A-208ENST00000580755 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.68■■□□□ 1.862e-14■■□□□ 11.7
RPL23A-208ENST00000580755 SCAPERQ9BY12 1400 aa26.62■■□□□ 1.85
RPL23A-208ENST00000580755 C3P01024 1663 aa26.6■■□□□ 1.85
RPL23A-208ENST00000580755 TRAPPC8Q9Y2L5 1435 aa26.56■■□□□ 1.84
RPL23A-208ENST00000580755 ZNF335Q9H4Z2 1342 aaPredicted RBP26.52■■□□□ 1.84
RPL23A-208ENST00000580755 CAMSAP1Q5T5Y3 1602 aa26.51■■□□□ 1.83
RPL23A-208ENST00000580755 REREQ9P2R6 1566 aa26.5■■□□□ 1.83
RPL23A-208ENST00000580755 PLCH2O75038 1416 aa26.49■■□□□ 1.83
RPL23A-208ENST00000580755 PHF23Q9BUL5 403 aaPredicted RBP26.48■■□□□ 1.83
RPL23A-208ENST00000580755 CDK13Q14004 1512 aaKnown RBP26.48■■□□□ 1.83
RPL23A-208ENST00000580755 FMN1Q68DA7 1419 aa26.48■■□□□ 1.83
RPL23A-208ENST00000580755 UBTFP17480 764 aaKnown RBP26.47■■□□□ 1.83
RPL23A-208ENST00000580755 HSPA1LP34931 641 aa26.47■■□□□ 1.83
RPL23A-208ENST00000580755 ZNF518AQ6AHZ1 1483 aa26.47■■□□□ 1.83
RPL23A-208ENST00000580755 KDM5CP41229 1560 aa26.44■■□□□ 1.82
RPL23A-208ENST00000580755 AGLP35573 1532 aa26.44■■□□□ 1.82
RPL23A-208ENST00000580755 DIP2CQ9Y2E4 1556 aa26.43■■□□□ 1.82
RPL23A-208ENST00000580755 ESF1Q9H501 851 aaKnown RBP26.43■■□□□ 1.82
RPL23A-208ENST00000580755 CDK11AQ9UQ88 783 aaPredicted RBP26.43■■□□□ 1.82
RPL23A-208ENST00000580755 CNTLNQ9NXG0 1405 aa26.41■■□□□ 1.82
RPL23A-208ENST00000580755 ARHGAP35Q9NRY4 1499 aa26.4■■□□□ 1.82
RPL23A-208ENST00000580755 NPATQ14207 1427 aa26.39■■□□□ 1.82
RPL23A-208ENST00000580755 ATP1B4Q9UN42 357 aaPredicted RBP26.39■■□□□ 1.82
RPL23A-208ENST00000580755 PLA2R1Q13018 1463 aa26.38■■□□□ 1.81
RPL23A-208ENST00000580755 EFCAB2Q5VUJ9 269 aa26.38■■□□□ 1.81
RPL23A-208ENST00000580755 SCAF1Q9H7N4 1312 aaKnown RBP26.38■■□□□ 1.81
RPL23A-208ENST00000580755 EHMT2Q96KQ7 1210 aa26.36■■□□□ 1.81
RPL23A-208ENST00000580755 MYO5CQ9NQX4 1742 aa26.36■■□□□ 1.81
RPL23A-208ENST00000580755 NCKAP5LQ9HCH0 1330 aa26.36■■□□□ 1.81
RPL23A-208ENST00000580755 PKD2Q13563 968 aa26.35■■□□□ 1.81
RPL23A-208ENST00000580755 CHIC1Q5VXU3 224 aa26.34■■□□□ 1.81
RPL23A-208ENST00000580755 TOM1O60784 492 aa26.33■■□□□ 1.81
RPL23A-208ENST00000580755 ABCA6Q8N139 1617 aa26.32■■□□□ 1.8
RPL23A-208ENST00000580755 TCOF1Q13428 1488 aaKnown RBP26.32■■□□□ 1.8
RPL23A-208ENST00000580755 PIP4K2BP78356 416 aa26.32■■□□□ 1.8
RPL23A-208ENST00000580755 MROH2AA6NES4 1674 aa26.31■■□□□ 1.8
RPL23A-208ENST00000580755 ZNF142P52746 1687 aaPredicted RBP26.31■■□□□ 1.8
RPL23A-208ENST00000580755 TROQ12816 1431 aaPredicted RBP26.31■■□□□ 1.8
RPL23A-208ENST00000580755 MLH3Q9UHC1 1453 aa26.29■■□□□ 1.8
RPL23A-208ENST00000580755 AFAP1Q8N556 730 aa26.28■■□□□ 1.8
RPL23A-208ENST00000580755 MYT1LQ9UL68 1186 aa26.28■■□□□ 1.8
RPL23A-208ENST00000580755 CLIP1P30622 1438 aa26.28■■□□□ 1.8
RPL23A-208ENST00000580755 KIF14Q15058 1648 aa26.28■■□□□ 1.8
RPL23A-208ENST00000580755 CPS1P31327 1500 aa26.26■■□□□ 1.79
RPL23A-208ENST00000580755 PPP6R1Q9UPN7 881 aa26.25■■□□□ 1.79
RPL23A-208ENST00000580755 SUPT6HQ7KZ85 1726 aaKnown RBP26.24■■□□□ 1.79
RPL23A-208ENST00000580755 MYO3AQ8NEV4 1616 aa26.24■■□□□ 1.79
RPL23A-208ENST00000580755 CEP170BQ9Y4F5 1589 aaPredicted RBP26.22■■□□□ 1.79
RPL23A-208ENST00000580755 ARHGAP5Q13017 1502 aa26.22■■□□□ 1.79
RPL23A-208ENST00000580755 ZMYM3Q14202 1370 aa26.18■■□□□ 1.78
RPL23A-208ENST00000580755 PTPRKQ15262 1439 aa26.17■■□□□ 1.78
RPL23A-208ENST00000580755 CASKIN1Q8WXD9 1431 aa26.15■■□□□ 1.78
RPL23A-208ENST00000580755 CCDC18Q5T9S5 1454 aa26.15■■□□□ 1.78
RPL23A-208ENST00000580755 LRRIQ1Q96JM4 1722 aa26.14■■□□□ 1.77
RPL23A-208ENST00000580755 SHANK2Q9UPX8 1470 aa26.11■■□□□ 1.77
RPL23A-208ENST00000580755 ALKQ9UM73 1620 aa26.1■■□□□ 1.77
RPL23A-208ENST00000580755 CDC42BPBQ9Y5S2 1711 aa26.08■■□□□ 1.77
RPL23A-208ENST00000580755 KIDINS220Q9ULH0 1771 aa26.08■■□□□ 1.77
RPL23A-208ENST00000580755 ABCC1P33527 1531 aa26.07■■□□□ 1.76
RPL23A-208ENST00000580755 PREX2Q70Z35 1606 aa26.06■■□□□ 1.76
RPL23A-208ENST00000580755 RGS17Q9UGC6 210 aaPredicted RBP26.06■■□□□ 1.76
RPL23A-208ENST00000580755 POLR1AO95602 1720 aaPredicted RBP26.05■■□□□ 1.76
RPL23A-208ENST00000580755 ITSN2Q9NZM3 1697 aa26.04■■□□□ 1.76
RPL23A-208ENST00000580755 CLTCQ00610 1675 aaKnown RBP26.03■■□□□ 1.76
RPL23A-208ENST00000580755 FYCO1Q9BQS8 1478 aa26.03■■□□□ 1.76
RPL23A-208ENST00000580755 A2ML1A8K2U0 1454 aa26.02■■□□□ 1.76
RPL23A-208ENST00000580755 NEURL4Q96JN8 1562 aa26.02■■□□□ 1.76
RPL23A-208ENST00000580755 DNMT1P26358 1616 aaKnown RBP26■■□□□ 1.75
RPL23A-208ENST00000580755 VWDEQ8N2E2 1590 aa25.97■■□□□ 1.75
RPL23A-208ENST00000580755 CDC42BPAQ5VT25 1732 aa25.94■■□□□ 1.74
RPL23A-208ENST00000580755 RNF17Q9BXT8 1623 aaKnown RBP25.93■■□□□ 1.74
RPL23A-208ENST00000580755 GPATCH8Q9UKJ3 1502 aaKnown RBP25.91■■□□□ 1.74
RPL23A-208ENST00000580755 PLXNC1O60486 1568 aa25.9■■□□□ 1.74
RPL23A-208ENST00000580755 SAMD9LQ8IVG5 1584 aa25.9■■□□□ 1.74
RPL23A-208ENST00000580755 ZNF777Q9ULD5 760 aaPredicted RBP25.9■■□□□ 1.74
RPL23A-208ENST00000580755 SENP3Q9H4L4 574 aaPredicted RBP25.89■■□□□ 1.74
RPL23A-208ENST00000580755 KIAA1107Q9UPP5 1409 aa25.88■■□□□ 1.73
RPL23A-208ENST00000580755 SPAG9O60271 1321 aaKnown RBP25.87■■□□□ 1.73
RPL23A-208ENST00000580755 SYNMO15061 1565 aa25.86■■□□□ 1.73
RPL23A-208ENST00000580755 POTEAQ6S8J7 498 aa25.86■■□□□ 1.73
RPL23A-208ENST00000580755 PLEKHH2Q8IVE3 1493 aa25.85■■□□□ 1.73
RPL23A-208ENST00000580755 SYCP2Q9BX26 1530 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms