RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 ADAMTSL3P82987 1691 aa20.58■□□□□ 0.89
CCDC57-211ENST00000578187 ZMYM4Q5VZL5 1548 aa20.58■□□□□ 0.88
CCDC57-211ENST00000578187 BCORL1Q5H9F3 1711 aa20.57■□□□□ 0.88
CCDC57-211ENST00000578187 MAGI2Q86UL8 1455 aa20.56■□□□□ 0.88
CCDC57-211ENST00000578187 TROQ12816 1431 aaPredicted RBP20.56■□□□□ 0.88
CCDC57-211ENST00000578187 LOC105371045A0A1W2PR82 267 aa20.56■□□□□ 0.88
CCDC57-211ENST00000578187 ZFYVE16Q7Z3T8 1539 aa20.56■□□□□ 0.88
CCDC57-211ENST00000578187 CCDC18Q5T9S5 1454 aa20.56■□□□□ 0.88
CCDC57-211ENST00000578187 POGZQ7Z3K3 1410 aa20.55■□□□□ 0.88
CCDC57-211ENST00000578187 EFCAB2Q5VUJ9 269 aa20.55■□□□□ 0.88
CCDC57-211ENST00000578187 SCAPERQ9BY12 1400 aa20.54■□□□□ 0.88
CCDC57-211ENST00000578187 PTPRMP28827 1452 aa20.54■□□□□ 0.88
CCDC57-211ENST00000578187 ARHGAP5Q13017 1502 aa20.52■□□□□ 0.87
CCDC57-211ENST00000578187 FOXD1Q16676 465 aa20.51■□□□□ 0.87
CCDC57-211ENST00000578187 MADDQ8WXG6 1647 aa20.51■□□□□ 0.87
CCDC57-211ENST00000578187 ZNF518AQ6AHZ1 1483 aa20.47■□□□□ 0.87
CCDC57-211ENST00000578187 YEATS2Q9ULM3 1422 aa20.46■□□□□ 0.87
CCDC57-211ENST00000578187 RIMS1Q86UR5 1692 aaKnown RBP20.45■□□□□ 0.86
CCDC57-211ENST00000578187 MYT1LQ9UL68 1186 aa20.43■□□□□ 0.86
CCDC57-211ENST00000578187 PREX2Q70Z35 1606 aa20.42■□□□□ 0.86
CCDC57-211ENST00000578187 C9orf84Q5VXU9 1444 aa20.42■□□□□ 0.86
CCDC57-211ENST00000578187 ATP10AO60312 1499 aa20.42■□□□□ 0.86
CCDC57-211ENST00000578187 CDC42BPBQ9Y5S2 1711 aa20.41■□□□□ 0.86
CCDC57-211ENST00000578187 VPS8Q8N3P4 1428 aa20.4■□□□□ 0.86
CCDC57-211ENST00000578187 KDM5CP41229 1560 aa20.39■□□□□ 0.85
CCDC57-211ENST00000578187 FER1L4A9Z1Z3 1794 aa20.39■□□□□ 0.85
CCDC57-211ENST00000578187 MLECQ14165 292 aa20.38■□□□□ 0.85
CCDC57-211ENST00000578187 SIGLEC1Q9BZZ2 1709 aa20.37■□□□□ 0.85
CCDC57-211ENST00000578187 AFAP1Q8N556 730 aa20.35■□□□□ 0.85
CCDC57-211ENST00000578187 ABCC1P33527 1531 aa20.35■□□□□ 0.85
CCDC57-211ENST00000578187 CDC42BPAQ5VT25 1732 aa20.34■□□□□ 0.85
CCDC57-211ENST00000578187 ITSN2Q9NZM3 1697 aa20.33■□□□□ 0.85
CCDC57-211ENST00000578187 TIAM1Q13009 1591 aa20.33■□□□□ 0.84
CCDC57-211ENST00000578187 EHBP1L1Q8N3D4 1523 aa20.32■□□□□ 0.84
CCDC57-211ENST00000578187 LMTK3Q96Q04 1460 aa20.31■□□□□ 0.84
CCDC57-211ENST00000578187 MLH3Q9UHC1 1453 aa20.31■□□□□ 0.84
CCDC57-211ENST00000578187 ARHGEF12Q9NZN5 1544 aa20.31■□□□□ 0.84
CCDC57-211ENST00000578187 DIP2CQ9Y2E4 1556 aa20.3■□□□□ 0.84
CCDC57-211ENST00000578187 ILDR1Q86SU0 546 aaPredicted RBP20.3■□□□□ 0.84
CCDC57-211ENST00000578187 REREQ9P2R6 1566 aa20.29■□□□□ 0.84
CCDC57-211ENST00000578187 MTUS2Q5JR59 1369 aa20.29■□□□□ 0.84
CCDC57-211ENST00000578187 ZNF777Q9ULD5 760 aaPredicted RBP20.28■□□□□ 0.84
CCDC57-211ENST00000578187 ABCA6Q8N139 1617 aa20.27■□□□□ 0.84
CCDC57-211ENST00000578187 MAP3K1Q13233 1512 aa20.27■□□□□ 0.83
CCDC57-211ENST00000578187 TRAPPC8Q9Y2L5 1435 aa20.27■□□□□ 0.83
CCDC57-211ENST00000578187 CCNB3Q8WWL7 1395 aa20.26■□□□□ 0.83
CCDC57-211ENST00000578187 ESF1Q9H501 851 aaKnown RBP20.25■□□□□ 0.83
CCDC57-211ENST00000578187 GPATCH8Q9UKJ3 1502 aaKnown RBP20.25■□□□□ 0.83
CCDC57-211ENST00000578187 PLEKHH2Q8IVE3 1493 aa20.24■□□□□ 0.83
CCDC57-211ENST00000578187 SAMD9LQ8IVG5 1584 aa20.24■□□□□ 0.83
CCDC57-211ENST00000578187 SUPT6HQ7KZ85 1726 aaKnown RBP20.23■□□□□ 0.83
CCDC57-211ENST00000578187 CFDP1Q9UEE9 299 aaPredicted RBP20.23■□□□□ 0.83
CCDC57-211ENST00000578187 SYCP2Q9BX26 1530 aa20.22■□□□□ 0.83
CCDC57-211ENST00000578187 AGLP35573 1532 aa20.22■□□□□ 0.83
CCDC57-211ENST00000578187 KIDINS220Q9ULH0 1771 aa20.21■□□□□ 0.83
CCDC57-211ENST00000578187 PREX1Q8TCU6 1659 aa20.21■□□□□ 0.83
CCDC57-211ENST00000578187 SPAG9O60271 1321 aaKnown RBP20.2■□□□□ 0.82
CCDC57-211ENST00000578187 KIAA1107Q9UPP5 1409 aa20.19■□□□□ 0.82
CCDC57-211ENST00000578187 LRRC9Q6ZRR7 1453 aa20.19■□□□□ 0.82
CCDC57-211ENST00000578187 HSPA2P54652 639 aa20.18■□□□□ 0.82
CCDC57-211ENST00000578187 HNRNPMP52272 730 aaKnown RBP eCLIP20.17■□□□□ 0.82
CCDC57-211ENST00000578187 CEBPAP49715 358 aaPredicted RBP20.15■□□□□ 0.82
CCDC57-211ENST00000578187 CNTLNQ9NXG0 1405 aa20.15■□□□□ 0.82
CCDC57-211ENST00000578187 NCOA2Q15596 1464 aa20.15■□□□□ 0.82
CCDC57-211ENST00000578187 ATP7AQ04656 1500 aa20.15■□□□□ 0.82
CCDC57-211ENST00000578187 UHRF1BP1Q6BDS2 1440 aa20.14■□□□□ 0.81
CCDC57-211ENST00000578187 C3P01024 1663 aa20.12■□□□□ 0.81
CCDC57-211ENST00000578187 INO80Q9ULG1 1556 aaPredicted RBP20.12■□□□□ 0.81
CCDC57-211ENST00000578187 FBXO41Q8TF61 875 aa20.11■□□□□ 0.81
CCDC57-211ENST00000578187 ADGBQ8N7X0 1667 aa20.08■□□□□ 0.81
CCDC57-211ENST00000578187 A2MP01023 1474 aa20.08■□□□□ 0.81
CCDC57-211ENST00000578187 MROH2AA6NES4 1674 aa20.07■□□□□ 0.8
CCDC57-211ENST00000578187 SETD1BQ9UPS6 1966 aaKnown RBP20.07■□□□□ 0.8
CCDC57-211ENST00000578187 PLXNC1O60486 1568 aa20.06■□□□□ 0.8
CCDC57-211ENST00000578187 KANK4Q5T7N3 995 aaPredicted RBP20.06■□□□□ 0.8
CCDC57-211ENST00000578187 DMRT2Q9Y5R5 561 aa20.06■□□□□ 0.8
CCDC57-211ENST00000578187 ZNF644Q9H582 1327 aaPredicted RBP20.02■□□□□ 0.8
CCDC57-211ENST00000578187 RTEL1-TNFRSF6BF6WH68 1400 aa20.02■□□□□ 0.8
CCDC57-211ENST00000578187 APLP2Q06481 763 aa20.02■□□□□ 0.8
CCDC57-211ENST00000578187 MBD5Q9P267 1494 aa20.01■□□□□ 0.79
CCDC57-211ENST00000578187 RSPH4AQ5TD94 716 aa20.01■□□□□ 0.79
CCDC57-211ENST00000578187 NPATQ14207 1427 aa20.01■□□□□ 0.79
CCDC57-211ENST00000578187 CLTCQ00610 1675 aaKnown RBP20■□□□□ 0.79
CCDC57-211ENST00000578187 CAMSAP2Q08AD1 1489 aa20■□□□□ 0.79
CCDC57-211ENST00000578187 CCDC141Q6ZP82 1450 aa20■□□□□ 0.79
CCDC57-211ENST00000578187 ZMYM3Q14202 1370 aa19.99■□□□□ 0.79
CCDC57-211ENST00000578187 GGT6Q6P531 493 aa19.99■□□□□ 0.79
CCDC57-211ENST00000578187 PPP6R1Q9UPN7 881 aa19.99■□□□□ 0.79
CCDC57-211ENST00000578187 MYOM3Q5VTT5 1437 aa19.98■□□□□ 0.79
CCDC57-211ENST00000578187 STRCQ7RTU9 1775 aa19.97■□□□□ 0.79
CCDC57-211ENST00000578187 ARHGEF5Q12774 1597 aa19.95■□□□□ 0.78
CCDC57-211ENST00000578187 MIA2Q96PC5 1412 aa19.95■□□□□ 0.78
CCDC57-211ENST00000578187 TSPY4P0CV99 314 aa19.94■□□□□ 0.78
CCDC57-211ENST00000578187 TSPY10P0CW01 314 aa19.94■□□□□ 0.78
CCDC57-211ENST00000578187 CERKQ8TCT0 537 aa19.94■□□□□ 0.78
CCDC57-211ENST00000578187 DHX29Q7Z478 1369 aaKnown RBP19.94■□□□□ 0.78
CCDC57-211ENST00000578187 PTPRTO14522 1441 aa19.92■□□□□ 0.78
CCDC57-211ENST00000578187 PTPN23Q9H3S7 1636 aa19.91■□□□□ 0.78
CCDC57-211ENST00000578187 FAM135AQ9P2D6 1515 aa19.9■□□□□ 0.78
CCDC57-211ENST00000578187 MYO3AQ8NEV4 1616 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms