RNA–Protein interactions for RNA: ENST00000576952.1

POLR2A-208, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-208ENST00000576952 MTUS2Q5JR59 1369 aa24.34■■□□□ 1.49
POLR2A-208ENST00000576952 EFCAB2Q5VUJ9 269 aa24.33■■□□□ 1.49
POLR2A-208ENST00000576952 EHBP1L1Q8N3D4 1523 aa24.33■■□□□ 1.49
POLR2A-208ENST00000576952 TIAM1Q13009 1591 aa24.33■■□□□ 1.48
POLR2A-208ENST00000576952 SCAPERQ9BY12 1400 aa24.3■■□□□ 1.48
POLR2A-208ENST00000576952 ITSN2Q9NZM3 1697 aa24.27■■□□□ 1.48
POLR2A-208ENST00000576952 ZMYM4Q5VZL5 1548 aa24.27■■□□□ 1.48
POLR2A-208ENST00000576952 SUPT6HQ7KZ85 1726 aaKnown RBP24.27■■□□□ 1.48
POLR2A-208ENST00000576952 GPATCH8Q9UKJ3 1502 aaKnown RBP24.26■■□□□ 1.47
POLR2A-208ENST00000576952 KDM4FA0A1W2PPD8 638 aa24.26■■□□□ 1.47
POLR2A-208ENST00000576952 AEBP2Q6ZN18 517 aaPredicted RBP24.26■■□□□ 1.47
POLR2A-208ENST00000576952 POGZQ7Z3K3 1410 aa24.26■■□□□ 1.47
POLR2A-208ENST00000576952 ABCC1P33527 1531 aa24.24■■□□□ 1.47
POLR2A-208ENST00000576952 ARHGEF40Q8TER5 1519 aa24.24■■□□□ 1.47
POLR2A-208ENST00000576952 SAMD9LQ8IVG5 1584 aa24.23■■□□□ 1.47
POLR2A-208ENST00000576952 CCNB3Q8WWL7 1395 aa24.21■■□□□ 1.47
POLR2A-208ENST00000576952 ZFYVE16Q7Z3T8 1539 aa24.2■■□□□ 1.46
POLR2A-208ENST00000576952 ARHGEF12Q9NZN5 1544 aa24.2■■□□□ 1.46
POLR2A-208ENST00000576952 MAP3K1Q13233 1512 aa24.19■■□□□ 1.46
POLR2A-208ENST00000576952 KDM5CP41229 1560 aa24.18■■□□□ 1.46
POLR2A-208ENST00000576952 ZNF518AQ6AHZ1 1483 aa24.18■■□□□ 1.46
POLR2A-208ENST00000576952 LRRC9Q6ZRR7 1453 aa24.18■■□□□ 1.46
POLR2A-208ENST00000576952 SIGLEC1Q9BZZ2 1709 aa24.18■■□□□ 1.46
POLR2A-208ENST00000576952 YEATS2Q9ULM3 1422 aa24.18■■□□□ 1.46
POLR2A-208ENST00000576952 ZNF777Q9ULD5 760 aaPredicted RBP24.17■■□□□ 1.46
POLR2A-208ENST00000576952 NCOA2Q15596 1464 aa24.17■■□□□ 1.46
POLR2A-208ENST00000576952 MAGI2Q86UL8 1455 aa24.16■■□□□ 1.46
POLR2A-208ENST00000576952 AFAP1Q8N556 730 aa24.15■■□□□ 1.46
POLR2A-208ENST00000576952 HECW2Q9P2P5 1572 aa24.15■■□□□ 1.46
POLR2A-208ENST00000576952 SYCP2Q9BX26 1530 aa24.15■■□□□ 1.46
POLR2A-208ENST00000576952 CFDP1Q9UEE9 299 aaPredicted RBP24.14■■□□□ 1.45
POLR2A-208ENST00000576952 TRAPPC8Q9Y2L5 1435 aa24.14■■□□□ 1.45
POLR2A-208ENST00000576952 KANK4Q5T7N3 995 aaPredicted RBP24.13■■□□□ 1.45
POLR2A-208ENST00000576952 BCORL1Q5H9F3 1711 aa24.13■■□□□ 1.45
POLR2A-208ENST00000576952 KIDINS220Q9ULH0 1771 aa24.1■■□□□ 1.45
POLR2A-208ENST00000576952 ADAMTSL3P82987 1691 aa24.09■■□□□ 1.45
POLR2A-208ENST00000576952 ABCA6Q8N139 1617 aa24.09■■□□□ 1.45
POLR2A-208ENST00000576952 HNRNPMP52272 730 aaKnown RBP eCLIP24.07■■□□□ 1.44
POLR2A-208ENST00000576952 DIP2CQ9Y2E4 1556 aa24.07■■□□□ 1.44
POLR2A-208ENST00000576952 ARID4BQ4LE39 1312 aaPredicted RBP24.07■■□□□ 1.44
POLR2A-208ENST00000576952 PLEKHH2Q8IVE3 1493 aa24.07■■□□□ 1.44
POLR2A-208ENST00000576952 ZNF644Q9H582 1327 aaPredicted RBP24.06■■□□□ 1.44
POLR2A-208ENST00000576952 APLP2Q06481 763 aa24.05■■□□□ 1.44
POLR2A-208ENST00000576952 MYT1LQ9UL68 1186 aa24.05■■□□□ 1.44
POLR2A-208ENST00000576952 ATP10AO60312 1499 aa24.05■■□□□ 1.44
POLR2A-208ENST00000576952 MLH3Q9UHC1 1453 aa24.05■■□□□ 1.44
POLR2A-208ENST00000576952 KIAA1107Q9UPP5 1409 aa24.04■■□□□ 1.44
POLR2A-208ENST00000576952 MADDQ8WXG6 1647 aa24.03■■□□□ 1.44
POLR2A-208ENST00000576952 C9orf84Q5VXU9 1444 aa24.01■■□□□ 1.43
POLR2A-208ENST00000576952 CAMSAP2Q08AD1 1489 aa24■■□□□ 1.43
POLR2A-208ENST00000576952 INO80Q9ULG1 1556 aaPredicted RBP23.99■■□□□ 1.43
POLR2A-208ENST00000576952 RIMS1Q86UR5 1692 aaKnown RBP23.99■■□□□ 1.43
POLR2A-208ENST00000576952 FER1L4A9Z1Z3 1794 aa23.98■■□□□ 1.43
POLR2A-208ENST00000576952 MBD5Q9P267 1494 aa23.98■■□□□ 1.43
POLR2A-208ENST00000576952 ATP7AQ04656 1500 aa23.97■■□□□ 1.43
POLR2A-208ENST00000576952 REREQ9P2R6 1566 aa23.97■■□□□ 1.43
POLR2A-208ENST00000576952 SPAG9O60271 1321 aaKnown RBP23.95■■□□□ 1.42
POLR2A-208ENST00000576952 MYOM3Q5VTT5 1437 aa23.94■■□□□ 1.42
POLR2A-208ENST00000576952 MLECQ14165 292 aa23.93■■□□□ 1.42
POLR2A-208ENST00000576952 ADGBQ8N7X0 1667 aa23.92■■□□□ 1.42
POLR2A-208ENST00000576952 ARHGEF5Q12774 1597 aa23.91■■□□□ 1.42
POLR2A-208ENST00000576952 PTPRMP28827 1452 aa23.9■■□□□ 1.42
POLR2A-208ENST00000576952 CCDC141Q6ZP82 1450 aa23.89■■□□□ 1.42
POLR2A-208ENST00000576952 MIA2Q96PC5 1412 aa23.88■■□□□ 1.41
POLR2A-208ENST00000576952 AGLP35573 1532 aa23.87■■□□□ 1.41
POLR2A-208ENST00000576952 PTPN23Q9H3S7 1636 aa23.87■■□□□ 1.41
POLR2A-208ENST00000576952 PLXNC1O60486 1568 aa23.84■■□□□ 1.41
POLR2A-208ENST00000576952 RTEL1-TNFRSF6BF6WH68 1400 aa23.83■■□□□ 1.4
POLR2A-208ENST00000576952 CROCC2H7BZ55 1655 aa23.82■■□□□ 1.4
POLR2A-208ENST00000576952 A2MP01023 1474 aa23.81■■□□□ 1.4
POLR2A-208ENST00000576952 RSPH4AQ5TD94 716 aa23.81■■□□□ 1.4
POLR2A-208ENST00000576952 FGD6Q6ZV73 1430 aa23.8■■□□□ 1.4
POLR2A-208ENST00000576952 MAST1Q9Y2H9 1570 aa23.78■■□□□ 1.4
POLR2A-208ENST00000576952 PLPPR3Q6T4P5 718 aa23.77■■□□□ 1.4
POLR2A-208ENST00000576952 TCOF1Q13428 1488 aaKnown RBP23.75■■□□□ 1.39
POLR2A-208ENST00000576952 DNMT1P26358 1616 aaKnown RBP23.75■■□□□ 1.39
POLR2A-208ENST00000576952 TSPY4P0CV99 314 aa23.75■■□□□ 1.39
POLR2A-208ENST00000576952 TSPY10P0CW01 314 aa23.75■■□□□ 1.39
POLR2A-208ENST00000576952 C3P01024 1663 aa23.75■■□□□ 1.39
POLR2A-208ENST00000576952 PPARGC1BQ86YN6 1023 aaKnown RBP23.73■■□□□ 1.39
POLR2A-208ENST00000576952 CLTCQ00610 1675 aaKnown RBP23.73■■□□□ 1.39
POLR2A-208ENST00000576952 DHX29Q7Z478 1369 aaKnown RBP23.7■■□□□ 1.38
POLR2A-208ENST00000576952 MROH2AA6NES4 1674 aa23.7■■□□□ 1.38
POLR2A-208ENST00000576952 ABCC5O15440 1437 aa23.69■■□□□ 1.38
POLR2A-208ENST00000576952 SETD1BQ9UPS6 1966 aaKnown RBP23.69■■□□□ 1.38
POLR2A-208ENST00000576952 CEBPAP49715 358 aaPredicted RBP23.68■■□□□ 1.38
POLR2A-208ENST00000576952 DAPK1P53355 1430 aa23.67■■□□□ 1.38
POLR2A-208ENST00000576952 ESF1Q9H501 851 aaKnown RBP23.66■■□□□ 1.38
POLR2A-208ENST00000576952 SHANK2Q9UPX8 1470 aa23.66■■□□□ 1.38
POLR2A-208ENST00000576952 GGT6Q6P531 493 aa23.65■■□□□ 1.38
POLR2A-208ENST00000576952 PREX1Q8TCU6 1659 aa23.64■■□□□ 1.38
POLR2A-208ENST00000576952 FAM50AQ14320 339 aaKnown RBP23.63■■□□□ 1.37
POLR2A-208ENST00000576952 CNTLNQ9NXG0 1405 aa23.63■■□□□ 1.37
POLR2A-208ENST00000576952 KIF3BO15066 747 aa23.62■■□□□ 1.37
POLR2A-208ENST00000576952 EIF2AK4Q9P2K8 1649 aaKnown RBP23.62■■□□□ 1.37
POLR2A-208ENST00000576952 LMTK3Q96Q04 1460 aa23.61■■□□□ 1.37
POLR2A-208ENST00000576952 DUOX2Q9NRD8 1548 aa23.59■■□□□ 1.37
POLR2A-208ENST00000576952 RNF17Q9BXT8 1623 aaKnown RBP23.59■■□□□ 1.37
POLR2A-208ENST00000576952 CHIC2Q9UKJ5 165 aa23.57■■□□□ 1.36
POLR2A-208ENST00000576952 ZMYM3Q14202 1370 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms