RNA–Protein interactions for RNA: ENST00000576582.5

CALCOCO2-228, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-228ENST00000576582 CERKQ8TCT0 537 aa17.82■□□□□ 0.44
CALCOCO2-228ENST00000576582 CDK11AQ9UQ88 783 aaPredicted RBP17.82■□□□□ 0.44
CALCOCO2-228ENST00000576582 HECW1Q76N89 1606 aa17.8■□□□□ 0.44
CALCOCO2-228ENST00000576582 ATP10AO60312 1499 aa17.8■□□□□ 0.44
CALCOCO2-228ENST00000576582 ATP1B4Q9UN42 357 aaPredicted RBP17.77■□□□□ 0.44
CALCOCO2-228ENST00000576582 DMRT2Q9Y5R5 561 aa17.77■□□□□ 0.44
CALCOCO2-228ENST00000576582 CDK13Q14004 1512 aaKnown RBP17.77■□□□□ 0.43
CALCOCO2-228ENST00000576582 C9orf84Q5VXU9 1444 aa17.76■□□□□ 0.43
CALCOCO2-228ENST00000576582 FMN1Q68DA7 1419 aa17.76■□□□□ 0.43
CALCOCO2-228ENST00000576582 SIGLEC1Q9BZZ2 1709 aa17.75■□□□□ 0.43
CALCOCO2-228ENST00000576582 ARHGEF12Q9NZN5 1544 aa17.74■□□□□ 0.43
CALCOCO2-228ENST00000576582 UBTFP17480 764 aaKnown RBP17.74■□□□□ 0.43
CALCOCO2-228ENST00000576582 FER1L4A9Z1Z3 1794 aa17.73■□□□□ 0.43
CALCOCO2-228ENST00000576582 CEBPAP49715 358 aaPredicted RBP17.71■□□□□ 0.43
CALCOCO2-228ENST00000576582 AFAP1Q8N556 730 aa17.71■□□□□ 0.43
CALCOCO2-228ENST00000576582 ZNF518AQ6AHZ1 1483 aa17.7■□□□□ 0.42
CALCOCO2-228ENST00000576582 ARHGAP35Q9NRY4 1499 aa17.69■□□□□ 0.42
CALCOCO2-228ENST00000576582 TROQ12816 1431 aaPredicted RBP17.68■□□□□ 0.42
CALCOCO2-228ENST00000576582 MYT1LQ9UL68 1186 aa17.68■□□□□ 0.42
CALCOCO2-228ENST00000576582 MYO5CQ9NQX4 1742 aa17.67■□□□□ 0.42
CALCOCO2-228ENST00000576582 CLIP1P30622 1438 aa17.67■□□□□ 0.42
CALCOCO2-228ENST00000576582 SETD1BQ9UPS6 1966 aaKnown RBP17.67■□□□□ 0.42
CALCOCO2-228ENST00000576582 PREX1Q8TCU6 1659 aa17.66■□□□□ 0.42
CALCOCO2-228ENST00000576582 UHRF1BP1Q6BDS2 1440 aa17.65■□□□□ 0.42
CALCOCO2-228ENST00000576582 ARHGAP5Q13017 1502 aa17.65■□□□□ 0.42
CALCOCO2-228ENST00000576582 KDM5CP41229 1560 aa17.64■□□□□ 0.41
CALCOCO2-228ENST00000576582 KIF14Q15058 1648 aa17.64■□□□□ 0.41
CALCOCO2-228ENST00000576582 ESF1Q9H501 851 aaKnown RBP17.63■□□□□ 0.41
CALCOCO2-228ENST00000576582 MLH3Q9UHC1 1453 aa17.63■□□□□ 0.41
CALCOCO2-228ENST00000576582 EHMT2Q96KQ7 1210 aa17.62■□□□□ 0.41
CALCOCO2-228ENST00000576582 REREQ9P2R6 1566 aa17.61■□□□□ 0.41
CALCOCO2-228ENST00000576582 PTPRTO14522 1441 aa17.59■□□□□ 0.41
CALCOCO2-228ENST00000576582 STRCQ7RTU9 1775 aa17.58■□□□□ 0.41
CALCOCO2-228ENST00000576582 AGLP35573 1532 aa17.58■□□□□ 0.41
CALCOCO2-228ENST00000576582 DIP2CQ9Y2E4 1556 aa17.57■□□□□ 0.4
CALCOCO2-228ENST00000576582 TRAPPC8Q9Y2L5 1435 aa17.57■□□□□ 0.4
CALCOCO2-228ENST00000576582 LRRIQ1Q96JM4 1722 aa17.57■□□□□ 0.4
CALCOCO2-228ENST00000576582 CNTLNQ9NXG0 1405 aa17.55■□□□□ 0.4
CALCOCO2-228ENST00000576582 DISP3Q9P2K9 1392 aa17.54■□□□□ 0.4
CALCOCO2-228ENST00000576582 CDC42BPBQ9Y5S2 1711 aa17.53■□□□□ 0.4
CALCOCO2-228ENST00000576582 CCDC18Q5T9S5 1454 aa17.52■□□□□ 0.4
CALCOCO2-228ENST00000576582 CASKIN1Q8WXD9 1431 aa17.52■□□□□ 0.4
CALCOCO2-228ENST00000576582 ABCA6Q8N139 1617 aa17.51■□□□□ 0.39
CALCOCO2-228ENST00000576582 ABCC1P33527 1531 aa17.51■□□□□ 0.39
CALCOCO2-228ENST00000576582 PREX2Q70Z35 1606 aa17.5■□□□□ 0.39
CALCOCO2-228ENST00000576582 SOCS7O14512 581 aa17.5■□□□□ 0.39
CALCOCO2-228ENST00000576582 C3P01024 1663 aa17.5■□□□□ 0.39
CALCOCO2-228ENST00000576582 ILDR2Q71H61 639 aa17.48■□□□□ 0.39
CALCOCO2-228ENST00000576582 IQSEC2Q5JU85 1478 aa17.48■□□□□ 0.39
CALCOCO2-228ENST00000576582 NPATQ14207 1427 aa17.47■□□□□ 0.39
CALCOCO2-228ENST00000576582 NCOA1Q15788 1441 aa17.47■□□□□ 0.39
CALCOCO2-228ENST00000576582 ZMYM3Q14202 1370 aa17.46■□□□□ 0.39
CALCOCO2-228ENST00000576582 ZNF777Q9ULD5 760 aaPredicted RBP17.46■□□□□ 0.39
CALCOCO2-228ENST00000576582 SPAG9O60271 1321 aaKnown RBP17.46■□□□□ 0.38
CALCOCO2-228ENST00000576582 KIDINS220Q9ULH0 1771 aa17.45■□□□□ 0.38
CALCOCO2-228ENST00000576582 ITSN2Q9NZM3 1697 aa17.45■□□□□ 0.38
CALCOCO2-228ENST00000576582 LTBP4Q8N2S1 1624 aa17.45■□□□□ 0.38
CALCOCO2-228ENST00000576582 FYCO1Q9BQS8 1478 aa17.44■□□□□ 0.38
CALCOCO2-228ENST00000576582 SAMD9LQ8IVG5 1584 aa17.42■□□□□ 0.38
CALCOCO2-228ENST00000576582 KIAA1107Q9UPP5 1409 aa17.42■□□□□ 0.38
CALCOCO2-228ENST00000576582 HNRNPMP52272 730 aaKnown RBP eCLIP17.42■□□□□ 0.38
CALCOCO2-228ENST00000576582 PPP6R1Q9UPN7 881 aa17.42■□□□□ 0.38
CALCOCO2-228ENST00000576582 CDC42BPAQ5VT25 1732 aa17.41■□□□□ 0.38
CALCOCO2-228ENST00000576582 PKD2Q13563 968 aa17.41■□□□□ 0.38
CALCOCO2-228ENST00000576582 GPATCH8Q9UKJ3 1502 aaKnown RBP17.41■□□□□ 0.38
CALCOCO2-228ENST00000576582 CFDP1Q9UEE9 299 aaPredicted RBP17.4■□□□□ 0.38
CALCOCO2-228ENST00000576582 CAMSAP1Q5T5Y3 1602 aa17.39■□□□□ 0.38
CALCOCO2-228ENST00000576582 MROH2AA6NES4 1674 aa17.39■□□□□ 0.37
CALCOCO2-228ENST00000576582 PLEKHH2Q8IVE3 1493 aa17.39■□□□□ 0.37
CALCOCO2-228ENST00000576582 NCKAP5LQ9HCH0 1330 aa17.39■□□□□ 0.37
CALCOCO2-228ENST00000576582 GGT6Q6P531 493 aa17.36■□□□□ 0.37
CALCOCO2-228ENST00000576582 CCNB3Q8WWL7 1395 aa17.36■□□□□ 0.37
CALCOCO2-228ENST00000576582 A2MP01023 1474 aa17.36■□□□□ 0.37
CALCOCO2-228ENST00000576582 SYCP2Q9BX26 1530 aa17.36■□□□□ 0.37
CALCOCO2-228ENST00000576582 PLA2R1Q13018 1463 aa17.35■□□□□ 0.37
CALCOCO2-228ENST00000576582 SPATA31D1Q6ZQQ2 1576 aa17.35■□□□□ 0.37
CALCOCO2-228ENST00000576582 UBAP1LF5GYI3 381 aa17.34■□□□□ 0.37
CALCOCO2-228ENST00000576582 ATP7AQ04656 1500 aa17.34■□□□□ 0.37
CALCOCO2-228ENST00000576582 PTPRKQ15262 1439 aa17.34■□□□□ 0.37
CALCOCO2-228ENST00000576582 ZNF335Q9H4Z2 1342 aaPredicted RBP17.34■□□□□ 0.37
CALCOCO2-228ENST00000576582 SUPT6HQ7KZ85 1726 aaKnown RBP17.33■□□□□ 0.36
CALCOCO2-228ENST00000576582 PLXNC1O60486 1568 aa17.32■□□□□ 0.36
CALCOCO2-228ENST00000576582 TCOF1Q13428 1488 aaKnown RBP17.31■□□□□ 0.36
CALCOCO2-228ENST00000576582 MTUS2Q5JR59 1369 aa17.29■□□□□ 0.36
CALCOCO2-228ENST00000576582 INO80Q9ULG1 1556 aaPredicted RBP17.29■□□□□ 0.36
CALCOCO2-228ENST00000576582 CLTCQ00610 1675 aaKnown RBP17.29■□□□□ 0.36
CALCOCO2-228ENST00000576582 CEP170BQ9Y4F5 1589 aaPredicted RBP17.28■□□□□ 0.36
CALCOCO2-228ENST00000576582 ZNF142P52746 1687 aaPredicted RBP17.27■□□□□ 0.36
CALCOCO2-228ENST00000576582 RTEL1-TNFRSF6BF6WH68 1400 aa17.27■□□□□ 0.35
CALCOCO2-228ENST00000576582 MYO3AQ8NEV4 1616 aa17.26■□□□□ 0.35
CALCOCO2-228ENST00000576582 DHX29Q7Z478 1369 aaKnown RBP17.26■□□□□ 0.35
CALCOCO2-228ENST00000576582 ZNF644Q9H582 1327 aaPredicted RBP17.25■□□□□ 0.35
CALCOCO2-228ENST00000576582 A2ML1A8K2U0 1454 aa17.24■□□□□ 0.35
CALCOCO2-228ENST00000576582 RSPH4AQ5TD94 716 aa17.24■□□□□ 0.35
CALCOCO2-228ENST00000576582 MBD5Q9P267 1494 aa17.24■□□□□ 0.35
CALCOCO2-228ENST00000576582 ADGBQ8N7X0 1667 aa17.23■□□□□ 0.35
CALCOCO2-228ENST00000576582 TOM1O60784 492 aa17.22■□□□□ 0.35
CALCOCO2-228ENST00000576582 TIAM1Q13009 1591 aa17.21■□□□□ 0.35
CALCOCO2-228ENST00000576582 EHBP1L1Q8N3D4 1523 aa17.21■□□□□ 0.34
CALCOCO2-228ENST00000576582 KIF3BO15066 747 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms