RNA–Protein interactions for RNA: ENST00000575882.5

TOM1L1-221, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOM1L1, Length 2,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-221ENST00000575882 CCDC7Q96M83 1385 aa23.81■■□□□ 1.4
TOM1L1-221ENST00000575882 CCDC184Q52MB2 194 aa23.81■■□□□ 1.4
TOM1L1-221ENST00000575882 ROCK1Q13464 1354 aa23.8■■□□□ 1.4
TOM1L1-221ENST00000575882 ANKRD30BQ9BXX2 1392 aa23.8■■□□□ 1.4
TOM1L1-221ENST00000575882 RPRD2Q5VT52 1461 aaKnown RBP23.79■■□□□ 1.4
TOM1L1-221ENST00000575882 PRKRIP1Q9H875 184 aaPredicted RBP23.77■■□□□ 1.4
TOM1L1-221ENST00000575882 NBPF8Q3BBV2 869 aa23.77■■□□□ 1.4
TOM1L1-221ENST00000575882 TEX14Q8IWB6 1497 aa23.76■■□□□ 1.39
TOM1L1-221ENST00000575882 ABCC5O15440 1437 aa23.76■■□□□ 1.39
TOM1L1-221ENST00000575882 DNMT1P26358 1616 aaKnown RBP23.76■■□□□ 1.39
TOM1L1-221ENST00000575882 ZNF644Q9H582 1327 aaPredicted RBP23.72■■□□□ 1.39
TOM1L1-221ENST00000575882 FAM9BQ8IZU0 186 aa23.72■■□□□ 1.39
TOM1L1-221ENST00000575882 MRS2Q9HD23 443 aa23.72■■□□□ 1.39
TOM1L1-221ENST00000575882 SLC4A1APQ9BWU0 796 aaKnown RBP23.71■■□□□ 1.39
TOM1L1-221ENST00000575882 CDK11AQ9UQ88 783 aaPredicted RBP23.71■■□□□ 1.39
TOM1L1-221ENST00000575882 ERICH6BQ5W0A0 696 aa23.7■■□□□ 1.38
TOM1L1-221ENST00000575882 KIAA0556O60303 1618 aa23.69■■□□□ 1.38
TOM1L1-221ENST00000575882 SPATA31E1Q6ZUB1 1445 aa23.69■■□□□ 1.38
TOM1L1-221ENST00000575882 NUP153P49790 1475 aaKnown RBP23.68■■□□□ 1.38
TOM1L1-221ENST00000575882 KIF7Q2M1P5 1343 aa23.68■■□□□ 1.38
TOM1L1-221ENST00000575882 DISP1Q96F81 1524 aa23.68■■□□□ 1.38
TOM1L1-221ENST00000575882 MRC2Q9UBG0 1479 aa23.67■■□□□ 1.38
TOM1L1-221ENST00000575882 ZBED9Q6R2W3 1325 aa23.65■■□□□ 1.38
TOM1L1-221ENST00000575882 KIAA0586Q9BVV6 1533 aa23.65■■□□□ 1.38
TOM1L1-221ENST00000575882 PPP4R2Q9NY27 417 aa23.65■■□□□ 1.38
TOM1L1-221ENST00000575882 POLR1AO95602 1720 aaPredicted RBP23.64■■□□□ 1.37
TOM1L1-221ENST00000575882 RAPGEF6Q8TEU7 1601 aa23.64■■□□□ 1.37
TOM1L1-221ENST00000575882 MSH5O43196 834 aa23.64■■□□□ 1.37
TOM1L1-221ENST00000575882 ZNF608Q9ULD9 1512 aaPredicted RBP23.62■■□□□ 1.37
TOM1L1-221ENST00000575882 FANCIQ9NVI1 1328 aa23.61■■□□□ 1.37
TOM1L1-221ENST00000575882 PZPP20742 1482 aa23.61■■□□□ 1.37
TOM1L1-221ENST00000575882 IFT140Q96RY7 1462 aa23.58■■□□□ 1.37
TOM1L1-221ENST00000575882 CAMSAP2Q08AD1 1489 aa23.57■■□□□ 1.36
TOM1L1-221ENST00000575882 PRG4Q92954 1404 aaPredicted RBP23.56■■□□□ 1.36
TOM1L1-221ENST00000575882 TROQ12816 1431 aaPredicted RBP23.55■■□□□ 1.36
TOM1L1-221ENST00000575882 CFDP1Q9UEE9 299 aaPredicted RBP23.55■■□□□ 1.36
TOM1L1-221ENST00000575882 MBD5Q9P267 1494 aa23.54■■□□□ 1.36
TOM1L1-221ENST00000575882 GRIN2AQ12879 1464 aa23.53■■□□□ 1.36
TOM1L1-221ENST00000575882 ADGBQ8N7X0 1667 aa23.53■■□□□ 1.36
TOM1L1-221ENST00000575882 KIAA1107Q9UPP5 1409 aa23.52■■□□□ 1.36
TOM1L1-221ENST00000575882 ITSN2Q9NZM3 1697 aa23.52■■□□□ 1.35
TOM1L1-221ENST00000575882 B4GALNT3Q6L9W6 998 aa23.51■■□□□ 1.35
TOM1L1-221ENST00000575882 DHX29Q7Z478 1369 aaKnown RBP23.51■■□□□ 1.35
TOM1L1-221ENST00000575882 USP47Q96K76 1375 aa23.5■■□□□ 1.35
TOM1L1-221ENST00000575882 GPATCH8Q9UKJ3 1502 aaKnown RBP23.5■■□□□ 1.35
TOM1L1-221ENST00000575882 ZNF326Q5BKZ1 582 aaKnown RBP23.49■■□□□ 1.35
TOM1L1-221ENST00000575882 ZNF777Q9ULD5 760 aaPredicted RBP23.49■■□□□ 1.35
TOM1L1-221ENST00000575882 ADGRL2O95490 1459 aa23.48■■□□□ 1.35
TOM1L1-221ENST00000575882 BCORL1Q5H9F3 1711 aa23.47■■□□□ 1.35
TOM1L1-221ENST00000575882 POLR3GLQ9BT43 218 aa23.47■■□□□ 1.35
TOM1L1-221ENST00000575882 PKD2Q13563 968 aa23.47■■□□□ 1.35
TOM1L1-221ENST00000575882 KIF14Q15058 1648 aa23.46■■□□□ 1.35
TOM1L1-221ENST00000575882 CNGB1Q14028 1251 aaPredicted RBP23.46■■□□□ 1.35
TOM1L1-221ENST00000575882 CROCC2H7BZ55 1655 aa23.46■■□□□ 1.35
TOM1L1-221ENST00000575882 PLB1Q6P1J6 1458 aa23.46■■□□□ 1.35
TOM1L1-221ENST00000575882 EIF4G3O43432 1585 aaKnown RBP23.44■■□□□ 1.34
TOM1L1-221ENST00000575882 ANKRD30AQ9BXX3 1397 aa23.44■■□□□ 1.34
TOM1L1-221ENST00000575882 ERICH6Q7L0X2 663 aa23.43■■□□□ 1.34
TOM1L1-221ENST00000575882 SMG6Q86US8 1419 aaKnown RBP23.43■■□□□ 1.34
TOM1L1-221ENST00000575882 ADCY10Q96PN6 1610 aa23.43■■□□□ 1.34
TOM1L1-221ENST00000575882 KDM5CP41229 1560 aa23.43■■□□□ 1.34
TOM1L1-221ENST00000575882 ANKRD50Q9ULJ7 1429 aa23.4■■□□□ 1.34
TOM1L1-221ENST00000575882 ARID4BQ4LE39 1312 aaPredicted RBP23.4■■□□□ 1.34
TOM1L1-221ENST00000575882 NUDCQ9Y266 331 aa23.37■■□□□ 1.33
TOM1L1-221ENST00000575882 CEP170Q5SW79 1584 aa23.37■■□□□ 1.33
TOM1L1-221ENST00000575882 UHRF1BP1Q6BDS2 1440 aa23.36■■□□□ 1.33
TOM1L1-221ENST00000575882 BCL11AQ9H165 835 aa23.35■■□□□ 1.33
TOM1L1-221ENST00000575882 RALGAPBQ86X10 1494 aa23.35■■□□□ 1.33
TOM1L1-221ENST00000575882 CHMP7Q8WUX9 453 aaPredicted RBP23.34■■□□□ 1.33
TOM1L1-221ENST00000575882 MAGI1Q96QZ7 1491 aaPredicted RBP23.33■■□□□ 1.33
TOM1L1-221ENST00000575882 ROCK2O75116 1388 aaKnown RBP23.33■■□□□ 1.33
TOM1L1-221ENST00000575882 NUP155O75694 1391 aa23.33■■□□□ 1.33
TOM1L1-221ENST00000575882 CARD11Q9BXL7 1154 aa23.32■■□□□ 1.32
TOM1L1-221ENST00000575882 CARMIL2Q6F5E8 1435 aa23.31■■□□□ 1.32
TOM1L1-221ENST00000575882 RNF123Q5XPI4 1314 aa23.31■■□□□ 1.32
TOM1L1-221ENST00000575882 C9orf84Q5VXU9 1444 aa23.3■■□□□ 1.32
TOM1L1-221ENST00000575882 PNISRQ8TF01 805 aaKnown RBP23.3■■□□□ 1.32
TOM1L1-221ENST00000575882 ARHGEF12Q9NZN5 1544 aa23.3■■□□□ 1.32
TOM1L1-221ENST00000575882 SYNJ2O15056 1496 aa23.3■■□□□ 1.32
TOM1L1-221ENST00000575882 SHANK2Q9UPX8 1470 aa23.3■■□□□ 1.32
TOM1L1-221ENST00000575882 TMC1Q8TDI8 760 aa23.29■■□□□ 1.32
TOM1L1-221ENST00000575882 CDC42BPAQ5VT25 1732 aa23.29■■□□□ 1.32
TOM1L1-221ENST00000575882 FBLN2P98095 1184 aa23.28■■□□□ 1.32
TOM1L1-221ENST00000575882 SENP3-EIF4A1A0A087X0R7 540 aa23.27■■□□□ 1.32
TOM1L1-221ENST00000575882 PLEKHD1A6NEE1 506 aa23.27■■□□□ 1.32
TOM1L1-221ENST00000575882 JPH4Q96JJ6 628 aa23.26■■□□□ 1.31
TOM1L1-221ENST00000575882 KIF15Q9NS87 1388 aa23.26■■□□□ 1.31
TOM1L1-221ENST00000575882 ABCC10Q5T3U5 1492 aa23.26■■□□□ 1.31
TOM1L1-221ENST00000575882 KDM5DQ9BY66 1539 aa23.25■■□□□ 1.31
TOM1L1-221ENST00000575882 KDM2AQ9Y2K7 1162 aa23.25■■□□□ 1.31
TOM1L1-221ENST00000575882 CCDC136Q96JN2 1154 aa23.24■■□□□ 1.31
TOM1L1-221ENST00000575882 ST20-MTHFSA0A0A6YYL1 179 aa23.24■■□□□ 1.31
TOM1L1-221ENST00000575882 TSPY4P0CV99 314 aa23.22■■□□□ 1.31
TOM1L1-221ENST00000575882 TSPY10P0CW01 314 aa23.22■■□□□ 1.31
TOM1L1-221ENST00000575882 NUP160Q12769 1436 aa23.22■■□□□ 1.31
TOM1L1-221ENST00000575882 ABCA8O94911 1581 aa23.21■■□□□ 1.31
TOM1L1-221ENST00000575882 DCAF11Q8TEB1 546 aa23.21■■□□□ 1.31
TOM1L1-221ENST00000575882 ATP10BO94823 1461 aa23.2■■□□□ 1.31
TOM1L1-221ENST00000575882 LRPPRCP42704 1394 aaKnown RBP23.2■■□□□ 1.3
TOM1L1-221ENST00000575882 MYBBP1AQ9BQG0 1328 aaKnown RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms