RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 GPATCH8Q9UKJ3 1502 aaKnown RBP34.09■■■■□ 3.05
NPLOC4-217ENST00000574897 ATP10BO94823 1461 aa34.08■■■■□ 3.05
NPLOC4-217ENST00000574897 PPP1R15AO75807 674 aaPredicted RBP34.08■■■■□ 3.05
NPLOC4-217ENST00000574897 TRIM52Q96A61 297 aa34.08■■■■□ 3.05
NPLOC4-217ENST00000574897 CAMSAP2Q08AD1 1489 aa34.07■■■■□ 3.04
NPLOC4-217ENST00000574897 CENPBP07199 599 aaPredicted RBP34.06■■■■□ 3.04
NPLOC4-217ENST00000574897 TONSLQ96HA7 1378 aa34.05■■■■□ 3.04
NPLOC4-217ENST00000574897 CFDP1Q9UEE9 299 aaPredicted RBP34.05■■■■□ 3.04
NPLOC4-217ENST00000574897 CDC42BPAQ5VT25 1732 aa34.02■■■■□ 3.04
NPLOC4-217ENST00000574897 ZNF777Q9ULD5 760 aaPredicted RBP34.01■■■■□ 3.04
NPLOC4-217ENST00000574897 PTPRGP23470 1445 aa34■■■■□ 3.03
NPLOC4-217ENST00000574897 ROCK1Q13464 1354 aa33.99■■■■□ 3.03
NPLOC4-217ENST00000574897 PLEKHD1A6NEE1 506 aa33.98■■■■□ 3.03
NPLOC4-217ENST00000574897 SHROOM2Q13796 1616 aa33.95■■■■□ 3.03
NPLOC4-217ENST00000574897 HIRIP3Q9BW71 556 aaPredicted RBP33.94■■■■□ 3.02
NPLOC4-217ENST00000574897 ERCC6L2Q5T890 1561 aa33.94■■■■□ 3.02
NPLOC4-217ENST00000574897 MPHOSPH9Q99550 1183 aa33.93■■■■□ 3.02
NPLOC4-217ENST00000574897 ABCC10Q5T3U5 1492 aa33.93■■■■□ 3.02
NPLOC4-217ENST00000574897 CROCC2H7BZ55 1655 aa33.93■■■■□ 3.02
NPLOC4-217ENST00000574897 KDM5BQ9UGL1 1544 aa33.92■■■■□ 3.02
NPLOC4-217ENST00000574897 FOXD1Q16676 465 aa33.92■■■■□ 3.02
NPLOC4-217ENST00000574897 ADGBQ8N7X0 1667 aa33.91■■■■□ 3.02
NPLOC4-217ENST00000574897 NCOA1Q15788 1441 aa33.83■■■■□ 3.01
NPLOC4-217ENST00000574897 DDX10Q13206 875 aaKnown RBP33.78■■■■□ 3
NPLOC4-217ENST00000574897 ADGRL2O95490 1459 aa33.76■■■□□ 2.99
NPLOC4-217ENST00000574897 GTF3C3Q9Y5Q9 886 aa33.75■■■□□ 2.99
NPLOC4-217ENST00000574897 CDC42BPBQ9Y5S2 1711 aa33.74■■■□□ 2.99
NPLOC4-217ENST00000574897 SLC4A1APQ9BWU0 796 aaKnown RBP33.71■■■□□ 2.99
NPLOC4-217ENST00000574897 PZPP20742 1482 aa33.7■■■□□ 2.99
NPLOC4-217ENST00000574897 ANKRD30BQ9BXX2 1392 aa33.7■■■□□ 2.98
NPLOC4-217ENST00000574897 CLASP1Q7Z460 1538 aa33.69■■■□□ 2.98
NPLOC4-217ENST00000574897 ANKRD30AQ9BXX3 1397 aa33.68■■■□□ 2.98
NPLOC4-217ENST00000574897 PREX2Q70Z35 1606 aa33.67■■■□□ 2.98
NPLOC4-217ENST00000574897 ABCC2Q92887 1545 aa33.66■■■□□ 2.98
NPLOC4-217ENST00000574897 HNRNPMP52272 730 aaKnown RBP eCLIP33.65■■■□□ 2.981e-6■■■■□ 20.4
NPLOC4-217ENST00000574897 C9orf84Q5VXU9 1444 aa33.65■■■□□ 2.98
NPLOC4-217ENST00000574897 SAMD9LQ8IVG5 1584 aa33.65■■■□□ 2.98
NPLOC4-217ENST00000574897 TTC37Q6PGP7 1564 aa33.64■■■□□ 2.98
NPLOC4-217ENST00000574897 L3MBTL2Q969R5 705 aa33.64■■■□□ 2.98
NPLOC4-217ENST00000574897 SHANK2Q9UPX8 1470 aa33.62■■■□□ 2.97
NPLOC4-217ENST00000574897 RPRD2Q5VT52 1461 aaKnown RBP33.61■■■□□ 2.97
NPLOC4-217ENST00000574897 ANKRD50Q9ULJ7 1429 aa33.6■■■□□ 2.97
NPLOC4-217ENST00000574897 KCNH8Q96L42 1107 aa33.59■■■□□ 2.97
NPLOC4-217ENST00000574897 MBD5Q9P267 1494 aa33.58■■■□□ 2.97
NPLOC4-217ENST00000574897 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.58■■■□□ 2.973e-6■■■■□ 25
NPLOC4-217ENST00000574897 ARHGEF5Q12774 1597 aa33.57■■■□□ 2.96
NPLOC4-217ENST00000574897 TEX14Q8IWB6 1497 aa33.54■■■□□ 2.96
NPLOC4-217ENST00000574897 TSPY4P0CV99 314 aa33.54■■■□□ 2.96
NPLOC4-217ENST00000574897 TSPY10P0CW01 314 aa33.54■■■□□ 2.96
NPLOC4-217ENST00000574897 ZCCHC11Q5TAX3 1644 aaKnown RBP33.52■■■□□ 2.96
NPLOC4-217ENST00000574897 ARHGAP5Q13017 1502 aa33.5■■■□□ 2.95
NPLOC4-217ENST00000574897 MYO5CQ9NQX4 1742 aa33.5■■■□□ 2.95
NPLOC4-217ENST00000574897 SYCP2Q9BX26 1530 aa33.49■■■□□ 2.95
NPLOC4-217ENST00000574897 CCDC141Q6ZP82 1450 aa33.48■■■□□ 2.95
NPLOC4-217ENST00000574897 KIF15Q9NS87 1388 aa33.48■■■□□ 2.95
NPLOC4-217ENST00000574897 KIAA1107Q9UPP5 1409 aa33.47■■■□□ 2.95
NPLOC4-217ENST00000574897 HSPA5P11021 654 aaKnown RBP33.47■■■□□ 2.95
NPLOC4-217ENST00000574897 PKD2Q13563 968 aa33.47■■■□□ 2.95
NPLOC4-217ENST00000574897 NBPF8Q3BBV2 869 aa33.46■■■□□ 2.95
NPLOC4-217ENST00000574897 NUP155O75694 1391 aa33.43■■■□□ 2.94
NPLOC4-217ENST00000574897 UHRF1BP1LA0JNW5 1464 aa33.37■■■□□ 2.93
NPLOC4-217ENST00000574897 EIF4G2P78344 907 aaKnown RBP eCLIP33.35■■■□□ 2.93
NPLOC4-217ENST00000574897 KDM5DQ9BY66 1539 aa33.34■■■□□ 2.93
NPLOC4-217ENST00000574897 WASHC2AQ641Q2 1341 aa33.33■■■□□ 2.93
NPLOC4-217ENST00000574897 ARHGEF12Q9NZN5 1544 aa33.31■■■□□ 2.92
NPLOC4-217ENST00000574897 RSPH4AQ5TD94 716 aa33.29■■■□□ 2.92
NPLOC4-217ENST00000574897 ANP32CO43423 234 aa33.29■■■□□ 2.92
NPLOC4-217ENST00000574897 MAST1Q9Y2H9 1570 aa33.29■■■□□ 2.92
NPLOC4-217ENST00000574897 PLCH2O75038 1416 aa33.25■■■□□ 2.91
NPLOC4-217ENST00000574897 C11orf95C9JLR9 678 aaPredicted RBP33.24■■■□□ 2.91
NPLOC4-217ENST00000574897 FAM135AQ9P2D6 1515 aa33.22■■■□□ 2.91
NPLOC4-217ENST00000574897 ZNF326Q5BKZ1 582 aaKnown RBP33.21■■■□□ 2.91
NPLOC4-217ENST00000574897 PLEKHH2Q8IVE3 1493 aa33.21■■■□□ 2.91
NPLOC4-217ENST00000574897 PLXNC1O60486 1568 aa33.19■■■□□ 2.9
NPLOC4-217ENST00000574897 SPATA31E1Q6ZUB1 1445 aa33.16■■■□□ 2.9
NPLOC4-217ENST00000574897 ABCC1P33527 1531 aa33.16■■■□□ 2.9
NPLOC4-217ENST00000574897 UNC13BO14795 1591 aa33.15■■■□□ 2.9
NPLOC4-217ENST00000574897 CCER2I3L3R5 266 aa33.15■■■□□ 2.9
NPLOC4-217ENST00000574897 EFCAB2Q5VUJ9 269 aa33.14■■■□□ 2.9
NPLOC4-217ENST00000574897 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.13■■■□□ 2.895e-7■■□□□ 13.1
NPLOC4-217ENST00000574897 TRAPPC8Q9Y2L5 1435 aa33.12■■■□□ 2.89
NPLOC4-217ENST00000574897 CCDC7Q96M83 1385 aa33.11■■■□□ 2.89
NPLOC4-217ENST00000574897 POLR1AO95602 1720 aaPredicted RBP33.11■■■□□ 2.89
NPLOC4-217ENST00000574897 WDR7Q9Y4E6 1490 aa33.08■■■□□ 2.89
NPLOC4-217ENST00000574897 CNTLNQ9NXG0 1405 aa33.06■■■□□ 2.88
NPLOC4-217ENST00000574897 DUOX2Q9NRD8 1548 aa33.06■■■□□ 2.88
NPLOC4-217ENST00000574897 IQGAP3Q86VI3 1631 aa33.04■■■□□ 2.88
NPLOC4-217ENST00000574897 KDM2AQ9Y2K7 1162 aa33.03■■■□□ 2.88
NPLOC4-217ENST00000574897 BCORL1Q5H9F3 1711 aa33.03■■■□□ 2.88
NPLOC4-217ENST00000574897 KIF7Q2M1P5 1343 aa33.02■■■□□ 2.88
NPLOC4-217ENST00000574897 UHRF1BP1Q6BDS2 1440 aa33.01■■■□□ 2.87
NPLOC4-217ENST00000574897 KDM5CP41229 1560 aa33.01■■■□□ 2.87
NPLOC4-217ENST00000574897 USP47Q96K76 1375 aa33■■■□□ 2.87
NPLOC4-217ENST00000574897 AFAP1Q8N556 730 aa33■■■□□ 2.87
NPLOC4-217ENST00000574897 PLA2R1Q13018 1463 aa32.98■■■□□ 2.87
NPLOC4-217ENST00000574897 ARAP3Q8WWN8 1544 aa32.98■■■□□ 2.87
NPLOC4-217ENST00000574897 DCAF11Q8TEB1 546 aa32.97■■■□□ 2.87
NPLOC4-217ENST00000574897 RALGAPBQ86X10 1494 aa32.97■■■□□ 2.87
NPLOC4-217ENST00000574897 ERBINQ96RT1 1412 aa32.97■■■□□ 2.87
NPLOC4-217ENST00000574897 ABCA9Q8IUA7 1624 aa32.96■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms