RNA–Protein interactions for RNA: ENST00000574158.1

POLR2A-203, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 461 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-203ENST00000574158 CDC42BPAQ5VT25 1732 aa22.6■■□□□ 1.21
POLR2A-203ENST00000574158 ARHGAP5Q13017 1502 aa22.6■■□□□ 1.21
POLR2A-203ENST00000574158 POGZQ7Z3K3 1410 aa22.59■■□□□ 1.21
POLR2A-203ENST00000574158 LOC105371045A0A1W2PR82 267 aa22.56■■□□□ 1.2
POLR2A-203ENST00000574158 SCAPERQ9BY12 1400 aa22.55■■□□□ 1.2
POLR2A-203ENST00000574158 ZFYVE16Q7Z3T8 1539 aa22.53■■□□□ 1.2
POLR2A-203ENST00000574158 EFCAB2Q5VUJ9 269 aa22.53■■□□□ 1.2
POLR2A-203ENST00000574158 ABCC1P33527 1531 aa22.52■■□□□ 1.19
POLR2A-203ENST00000574158 EHBP1L1Q8N3D4 1523 aa22.52■■□□□ 1.19
POLR2A-203ENST00000574158 KDM5CP41229 1560 aa22.51■■□□□ 1.19
POLR2A-203ENST00000574158 MAGI2Q86UL8 1455 aa22.51■■□□□ 1.19
POLR2A-203ENST00000574158 ITSN2Q9NZM3 1697 aa22.51■■□□□ 1.19
POLR2A-203ENST00000574158 SIGLEC1Q9BZZ2 1709 aa22.5■■□□□ 1.19
POLR2A-203ENST00000574158 YEATS2Q9ULM3 1422 aa22.49■■□□□ 1.19
POLR2A-203ENST00000574158 ADAMTSL3P82987 1691 aa22.49■■□□□ 1.19
POLR2A-203ENST00000574158 BCORL1Q5H9F3 1711 aa22.49■■□□□ 1.19
POLR2A-203ENST00000574158 VPS8Q8N3P4 1428 aa22.48■■□□□ 1.19
POLR2A-203ENST00000574158 ZNF518AQ6AHZ1 1483 aa22.48■■□□□ 1.19
POLR2A-203ENST00000574158 MTUS2Q5JR59 1369 aa22.47■■□□□ 1.19
POLR2A-203ENST00000574158 GPATCH8Q9UKJ3 1502 aaKnown RBP22.47■■□□□ 1.19
POLR2A-203ENST00000574158 TIAM1Q13009 1591 aa22.46■■□□□ 1.19
POLR2A-203ENST00000574158 SAMD9LQ8IVG5 1584 aa22.46■■□□□ 1.19
POLR2A-203ENST00000574158 ARHGEF12Q9NZN5 1544 aa22.45■■□□□ 1.18
POLR2A-203ENST00000574158 HECW2Q9P2P5 1572 aa22.45■■□□□ 1.18
POLR2A-203ENST00000574158 MADDQ8WXG6 1647 aa22.41■■□□□ 1.18
POLR2A-203ENST00000574158 TRAPPC8Q9Y2L5 1435 aa22.4■■□□□ 1.18
POLR2A-203ENST00000574158 DIP2CQ9Y2E4 1556 aa22.39■■□□□ 1.18
POLR2A-203ENST00000574158 SYCP2Q9BX26 1530 aa22.39■■□□□ 1.17
POLR2A-203ENST00000574158 SUPT6HQ7KZ85 1726 aaKnown RBP22.39■■□□□ 1.17
POLR2A-203ENST00000574158 ABCA6Q8N139 1617 aa22.39■■□□□ 1.17
POLR2A-203ENST00000574158 CCNB3Q8WWL7 1395 aa22.38■■□□□ 1.17
POLR2A-203ENST00000574158 ATP10AO60312 1499 aa22.36■■□□□ 1.17
POLR2A-203ENST00000574158 MLH3Q9UHC1 1453 aa22.36■■□□□ 1.17
POLR2A-203ENST00000574158 C9orf84Q5VXU9 1444 aa22.36■■□□□ 1.17
POLR2A-203ENST00000574158 KIDINS220Q9ULH0 1771 aa22.35■■□□□ 1.17
POLR2A-203ENST00000574158 REREQ9P2R6 1566 aa22.35■■□□□ 1.17
POLR2A-203ENST00000574158 AFAP1Q8N556 730 aa22.35■■□□□ 1.17
POLR2A-203ENST00000574158 RIMS1Q86UR5 1692 aaKnown RBP22.34■■□□□ 1.17
POLR2A-203ENST00000574158 MAP3K1Q13233 1512 aa22.34■■□□□ 1.17
POLR2A-203ENST00000574158 NCOA2Q15596 1464 aa22.34■■□□□ 1.17
POLR2A-203ENST00000574158 PTPRMP28827 1452 aa22.33■■□□□ 1.16
POLR2A-203ENST00000574158 PLEKHH2Q8IVE3 1493 aa22.33■■□□□ 1.16
POLR2A-203ENST00000574158 ARID4BQ4LE39 1312 aaPredicted RBP22.32■■□□□ 1.16
POLR2A-203ENST00000574158 KIAA1107Q9UPP5 1409 aa22.31■■□□□ 1.16
POLR2A-203ENST00000574158 LRRC9Q6ZRR7 1453 aa22.31■■□□□ 1.16
POLR2A-203ENST00000574158 FER1L4A9Z1Z3 1794 aa22.3■■□□□ 1.16
POLR2A-203ENST00000574158 INO80Q9ULG1 1556 aaPredicted RBP22.29■■□□□ 1.16
POLR2A-203ENST00000574158 CFDP1Q9UEE9 299 aaPredicted RBP22.29■■□□□ 1.16
POLR2A-203ENST00000574158 ZNF777Q9ULD5 760 aaPredicted RBP22.28■■□□□ 1.16
POLR2A-203ENST00000574158 ATP7AQ04656 1500 aa22.26■■□□□ 1.15
POLR2A-203ENST00000574158 AGLP35573 1532 aa22.24■■□□□ 1.15
POLR2A-203ENST00000574158 MBD5Q9P267 1494 aa22.23■■□□□ 1.15
POLR2A-203ENST00000574158 CAMSAP2Q08AD1 1489 aa22.22■■□□□ 1.15
POLR2A-203ENST00000574158 HNRNPMP52272 730 aaKnown RBP eCLIP22.21■■□□□ 1.15
POLR2A-203ENST00000574158 ZNF644Q9H582 1327 aaPredicted RBP22.21■■□□□ 1.15
POLR2A-203ENST00000574158 PLXNC1O60486 1568 aa22.2■■□□□ 1.14
POLR2A-203ENST00000574158 MYT1LQ9UL68 1186 aa22.19■■□□□ 1.14
POLR2A-203ENST00000574158 SPAG9O60271 1321 aaKnown RBP22.18■■□□□ 1.14
POLR2A-203ENST00000574158 KANK4Q5T7N3 995 aaPredicted RBP22.18■■□□□ 1.14
POLR2A-203ENST00000574158 ADGBQ8N7X0 1667 aa22.17■■□□□ 1.14
POLR2A-203ENST00000574158 MLECQ14165 292 aa22.16■■□□□ 1.14
POLR2A-203ENST00000574158 ARHGEF5Q12774 1597 aa22.16■■□□□ 1.14
POLR2A-203ENST00000574158 CCDC141Q6ZP82 1450 aa22.15■■□□□ 1.14
POLR2A-203ENST00000574158 MYOM3Q5VTT5 1437 aa22.13■■□□□ 1.13
POLR2A-203ENST00000574158 A2MP01023 1474 aa22.11■■□□□ 1.13
POLR2A-203ENST00000574158 RTEL1-TNFRSF6BF6WH68 1400 aa22.1■■□□□ 1.13
POLR2A-203ENST00000574158 LMTK3Q96Q04 1460 aa22.09■■□□□ 1.13
POLR2A-203ENST00000574158 MIA2Q96PC5 1412 aa22.08■■□□□ 1.13
POLR2A-203ENST00000574158 C3P01024 1663 aa22.07■■□□□ 1.12
POLR2A-203ENST00000574158 MROH2AA6NES4 1674 aa22.05■■□□□ 1.12
POLR2A-203ENST00000574158 MAST1Q9Y2H9 1570 aa22.05■■□□□ 1.12
POLR2A-203ENST00000574158 PREX1Q8TCU6 1659 aa22.04■■□□□ 1.12
POLR2A-203ENST00000574158 APLP2Q06481 763 aa22.03■■□□□ 1.12
POLR2A-203ENST00000574158 PTPN23Q9H3S7 1636 aa22.02■■□□□ 1.12
POLR2A-203ENST00000574158 CROCC2H7BZ55 1655 aa22.02■■□□□ 1.12
POLR2A-203ENST00000574158 CNTLNQ9NXG0 1405 aa22.01■■□□□ 1.11
POLR2A-203ENST00000574158 RSPH4AQ5TD94 716 aa22.01■■□□□ 1.11
POLR2A-203ENST00000574158 CLTCQ00610 1675 aaKnown RBP22■■□□□ 1.11
POLR2A-203ENST00000574158 PLPPR3Q6T4P5 718 aa21.99■■□□□ 1.11
POLR2A-203ENST00000574158 SETD1BQ9UPS6 1966 aaKnown RBP21.98■■□□□ 1.11
POLR2A-203ENST00000574158 FGD6Q6ZV73 1430 aa21.97■■□□□ 1.11
POLR2A-203ENST00000574158 TCOF1Q13428 1488 aaKnown RBP21.97■■□□□ 1.11
POLR2A-203ENST00000574158 DHX29Q7Z478 1369 aaKnown RBP21.97■■□□□ 1.11
POLR2A-203ENST00000574158 CEBPAP49715 358 aaPredicted RBP21.96■■□□□ 1.11
POLR2A-203ENST00000574158 DNMT1P26358 1616 aaKnown RBP21.95■■□□□ 1.1
POLR2A-203ENST00000574158 SHANK2Q9UPX8 1470 aa21.94■■□□□ 1.1
POLR2A-203ENST00000574158 RNF17Q9BXT8 1623 aaKnown RBP21.91■■□□□ 1.1
POLR2A-203ENST00000574158 EIF2AK4Q9P2K8 1649 aaKnown RBP21.91■■□□□ 1.1
POLR2A-203ENST00000574158 FAM135AQ9P2D6 1515 aa21.91■■□□□ 1.1
POLR2A-203ENST00000574158 TSPY4P0CV99 314 aa21.9■■□□□ 1.1
POLR2A-203ENST00000574158 TSPY10P0CW01 314 aa21.9■■□□□ 1.1
POLR2A-203ENST00000574158 ESF1Q9H501 851 aaKnown RBP21.9■■□□□ 1.1
POLR2A-203ENST00000574158 ABCC5O15440 1437 aa21.89■■□□□ 1.1
POLR2A-203ENST00000574158 NPATQ14207 1427 aa21.89■■□□□ 1.09
POLR2A-203ENST00000574158 UHRF1BP1Q6BDS2 1440 aa21.89■■□□□ 1.09
POLR2A-203ENST00000574158 KDM5DQ9BY66 1539 aa21.88■■□□□ 1.09
POLR2A-203ENST00000574158 DAPK1P53355 1430 aa21.88■■□□□ 1.09
POLR2A-203ENST00000574158 HSPA2P54652 639 aa21.87■■□□□ 1.09
POLR2A-203ENST00000574158 ZMYM3Q14202 1370 aa21.87■■□□□ 1.09
POLR2A-203ENST00000574158 GGT6Q6P531 493 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms